Factsheet for Bra019950.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, golgi
PProwler:	mitochondrion
WoLF PSORT:	golgi
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra017901.1-P	plasma membrane
Bra018449.1-P
Bra019950.1-P
Bra031707.1-P
Bra035433.1-P	plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G10290.1	Bra018449.1-P	AT1G10290.1	25462567
AT1G10290.1	Bra019950.1-P	AT1G10290.1	25462567
AT1G10290.1	Bra031707.1-P	AT1G10290.1	25462567
AT1G10290.1	Bra017901.1-P	AT1G59610.1	25462567
AT1G10290.1	Bra035433.1-P	AT1G59610.1	25462567
AT1G10290.1	Bra017901.1-P	AT1G59610.1	25462567
AT1G10290.1	Bra035433.1-P	AT1G59610.1	25462567

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93442	Canola	cytosol	96.81	99.78
CDX94909	Canola	mitochondrion	75.93	98.07
CDX94910	Canola	cytosol	49.41	97.68
AT1G10290.1	Thale cress	cytosol	91.48	93.98
Bra018449.1-P	Field mustard	cytosol	90.84	93.43
Bra031707.1-P	Field mustard	cytosol	90.73	93.11
Bra017901.1-P	Field mustard	cytosol	88.29	87.72
Bra035433.1-P	Field mustard	cytosol	88.6	83.12
VIT_18s0089g00350.t01	Wine grape	cytosol	77.96	78.63
KRH27552	Soybean	cytosol	76.04	77.44
KRH36411	Soybean	endoplasmic reticulum, nucleus	75.72	77.11
GSMUA_Achr7P05530_001	Banana	nucleus	74.01	75.46
GSMUA_Achr1P18350_001	Banana	cytosol	71.57	75.17
GSMUA_Achr4P20040_001	Banana	cytosol	73.27	74.86
VIT_15s0107g00170.t01	Wine grape	cytosol	18.64	74.47
EER88160	Sorghum	cytosol, endoplasmic reticulum, nucleus	71.57	73.6
Zm00001d037279_P005	Maize	plasma membrane	71.25	73.27
GSMUA_Achr3P01090_001	Banana	nucleus	71.35	72.98
TraesCS7D01G200900.1	Wheat	golgi, unclear	69.97	72.76
TraesCS7A01G198100.1	Wheat	cytosol, nucleus, plasma membrane	69.86	72.65
Zm00001d017979_P002	Maize	extracellular, mitochondrion	71.25	72.64
EES05560	Sorghum	nucleus	71.25	72.64
Zm00001d044757_P006	Maize	cytosol, nucleus, plasma membrane	70.5	72.51
TraesCS7B01G104500.1	Wheat	golgi, unclear	69.54	72.31
Os06t0247800-01	Rice	plasma membrane	70.07	72.23
HORVU7Hr1G040670.2	Barley	cytosol, nucleus, plasma membrane	69.33	72.17
TraesCS6D01G291700.1	Wheat	nucleus	69.01	71.76
Os02t0738900-01	Rice	plasma membrane	70.18	71.4
TraesCS6A01G312300.3	Wheat	nucleus	69.01	71.21
KXG25176	Sorghum	cytosol	54.63	68.22
Os08t0425100-01	Rice	plasma membrane	55.38	67.89
TraesCS6B01G342500.2	Wheat	cytosol	66.35	67.5
HORVU6Hr1G077000.1	Barley	cytosol, mitochondrion, nucleus	69.33	67.04
VIT_19s0015g02240.t01	Wine grape	golgi, mitochondrion, plasma membrane	18.64	66.04
Zm00001d032256_P001	Maize	cytosol	56.44	56.99
Zm00001d051815_P002	Maize	cytosol	31.52	53.92
Bra007513.1-P	Field mustard	cytosol	20.23	30.4
Bra014507.1-P	Field mustard	cytosol	20.23	30.35
Bra003469.1-P	Field mustard	cytosol	18.1	29.57
Bra026801.1-P	Field mustard	cytosol	18.96	28.99
Bra016679.1-P	Field mustard	cytosol	18.85	28.83
Bra037643.1-P	Field mustard	cytosol	18.96	28.8
Bra028525.1-P	Field mustard	cytosol	18.32	28.2
Bra025448.1-P	Field mustard	cytosol	17.25	27.79
Bra034579.1-P	Field mustard	cytosol	16.72	19.45
Bra011458.1-P	Field mustard	cytosol	16.61	19.33
Bra036991.1-P	Field mustard	cytosol	16.61	19.33
Bra031505.1-P	Field mustard	cytosol	9.9	16.26
Bra031502.1-P	Field mustard	cytosol	11.29	16.21
Bra010250.1-P	Field mustard	cytosol	6.82	16.2
Bra027151.1-P	Field mustard	cytosol	11.61	16.15
Bra038229.1-P	Field mustard	cytosol	11.4	13.61
Bra038100.1-P	Field mustard	cytosol	10.76	12.32
Bra037604.1-P	Field mustard	plastid	8.95	10.91
Bra031511.1-P	Field mustard	cytosol	6.5	9.87
HORVU4Hr1G074040.2	Barley	nucleus	2.66	9.77
HORVU5Hr1G092990.14	Barley	cytosol	2.66	9.43
HORVU4Hr1G073960.12	Barley	cytosol	3.73	8.77

Protein Annotations

Gene3D:1.20.120.1240	Gene3D:2.30.29.30	MapMan:22.1.7.2	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra019950	EnsemblPlants:Bra019950.1
EnsemblPlants:Bra019950.1-P	InterPro:Dynamin_GTPase	InterPro:Dynamin_GTPase_CS	InterPro:Dynamin_SF	InterPro:Dynamin_central	InterPro:GED
InterPro:GED_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0016787	InterPro:G_DYNAMIN_dom	InterPro:IPR001849	InterPro:IPR011993	InterPro:IPR020850
InterPro:IPR030381	UniProt:M4DTV7	InterPro:P-loop_NTPase	PFAM:PF00169	PFAM:PF00350	PFAM:PF01031
PFAM:PF02212	InterPro:PH-like_dom_sf	InterPro:PH_domain	PRINTS:PR00195	ScanProsite:PS00410	PFscan:PS50003
PFscan:PS51388	PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF57	SMART:SM00053	SMART:SM00233
SUPFAM:SSF50729	SUPFAM:SSF52540	UniParc:UPI000253EA07	SEG:seg	:	:

Description

AT1G10290 (E=0.0) ADL6, DRP2A | ADL6 (DYNAMIN-LIKE PROTEIN 6); GTPase

Coordinates

chrA06:+:3542189..3548772

Molecular Weight (calculated)

102044.0 Da

IEP (calculated)

9.373

GRAVY (calculated)

-0.448

Length

939 amino acids

Sequence
(BLAST)

001: MEAIDELSQL SDSMKQAASL LADEDPDETS SSRRPATFLN VVALGNVGAG KSAVLNSLIG HPVLPTGENG ATRAPIIIDL SREASLSSKA IILQIDSKSQ
101: QVSASALRHS LQDRLSKGAS GKNRDQIYLN LRTSTAPPLK LVDLPGLDQR IVDDSMIAEY AQHNDAILLV IVPASQASEI SSSRALKIAK EHDPESTRTV
201: GIIGKIDQAA ENPKALAAVQ ALLSNQGPPK TTDIPWVALI GQSVAIASAQ SGSGENSLET AWRAESESLK SILTGAPQSK LGRVALVDTL ASQIRSRMKL
301: RLPSILSGLQ GKSQIVQNEL ARLGEQLVNS AEGTRAIALE LCREFEEKFL LHLAGGGGSG WKVVASFEGN FPNRIKQLPL DRHFDLNNVK RVVLEADGYQ
401: PYLISPEKGL RSLIKIVLEL AKDPARLCVD EVHRVLVDIV SASANATPGL GRYPPFKREV VAIASAALDG FKNEAKKMVV ALVDMERAFV PPQHFIRLVQ
501: RRMERQRRED ELKGRSSKKG QDAEQSLLSR AASPQPDGSM KSMKDKPSPQ DKETPEVSGL KTAGPEGEIT AGYLMKKSAK TNGWSRRWFV LNEKTGKLGY
601: TKKQEERNFR GTITLEECTI EEIPEEEVEK SKSSKDKKAN GPDPKGPGLI FKITCKVPYK TVLKAHNSLV LKAESAVDKN EWINKLQKVI QARGGQVGNI
701: SMRQSFSEGS LDKMVRKPVD PEEELRWMSQ EVRGYVEAVL NSLAANVPKA VVLCQVEKSK EDMLNQLYSS IRFNIGPPPC DEFHFSCGVL ICALLYLIYS
801: AIGNERIESL IQEDQNVKGK RERYLKQSSL LSKLTRQLSV HDNRAAAASS WSDNGSTESS PKTSGGSSGD DWMNAFNAAG NGGSDSLSRY GSGGHSHSRR
901: YSDPAQNGDL PSPGSGSSRR TTPNRLPPAP PQGGSSYRY

Best Arabidopsis Sequence Match ( AT1G10290.1 )
(BLAST)

001: MEAIDELSQL SDSMKQAASL LADEDPDETS SSKRPATFLN VVALGNVGAG KSAVLNSLIG HPVLPTGENG ATRAPIIIEL SRESSLSSKA IILQIDNKSQ
101: QVSASALRHS LQDRLSKGAS GKNRDEINLK LRTSTAPPLK LVDLPGLDQR IVDESMIAEY AQHNDAILLV IVPASQASEI SSSRALKIAK EYDPESTRTI
201: GIIGKIDQAA ENSKALAAVQ ALLSNQGPPK TTDIPWVAVI GQSVSIASAQ SGSGENSLET AWRAESESLK SILTGAPQSK LGRIALVDTL ASQIRSRMKL
301: RLPSVLSGLQ GKSQIVQDEL ARLGEQLVNS AEGTRAIALE LCREFEDKFL LHLAGGEGSG WKVVASFEGN FPNRIKQLPL DRHFDLNNVK RVVLEADGYQ
401: PYLISPEKGL RSLIKIVLEL AKDPARLCVD EVHRVLVDIV SASANATPGL GRYPPFKREV VAIASAALDG FKNEAKKMVV ALVDMERAFV PPQHFIRLVQ
501: RRMERQRREE ELKGRSSKKG QDAEQSLLSR ATSPQPDGPT AGGSLKSMKD KPSPQDKETP EVSGLKTAGP EGEITAGYLM KKSAKTNGWS RRWFVLNEKT
601: GKLGYTKKQE ERNFRGTITL EECTIEEIPE DEVEKSKSSK DKKANGPDSK GPGLVFKITC KVPYKTVLKA HNALVLKAES VVDKNEWINK LQKVIQARGG
701: QVGSVSMRQS LSEGSLDKMV RKPIDPEEEL RWMSQEVRGY VEAVLNSLAA NVPKAVVLCQ VEKAKEDMLN QLYSSISAIG NERIESLIQE DQNVKRRRER
801: YQKQSSLLSK LTRQLSIHDN RAAAASSYSD NSGTESSPRA SGGSSGDDWM NAFNSAANGP SDSLSKYGSG GHSRRYSDPA QNGDAASPGS GSNRRTTPNR
901: LPPAPPPTGS AYRY

Arabidopsis Description

DRP2ADRP2A [Source:UniProtKB/TrEMBL;Acc:A0A178WBB3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.