Factsheet for Bra038229.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42203	Canola	cytosol	100.0	100.0
CDY33414	Canola	cytosol	98.35	99.49
AT3G19720.1	Thale cress	cytosol	94.66	95.75
VIT_12s0055g00490.t01	Wine grape	cytosol	77.86	79.17
KRH42202	Soybean	nucleus	75.57	79.09
Solyc10g047050.1.1	Tomato	nucleus	75.7	77.17
PGSC0003DMT400014025	Potato	cytosol	75.7	77.17
GSMUA_Achr10P...	Banana	cytosol	62.6	72.46
KRH58326	Soybean	plasma membrane	41.48	65.33
Bra037643.1-P	Field mustard	cytosol	15.78	20.06
Bra025448.1-P	Field mustard	cytosol	14.76	19.9
Bra016679.1-P	Field mustard	cytosol	15.52	19.87
Bra026801.1-P	Field mustard	cytosol	15.39	19.71
Bra014507.1-P	Field mustard	cytosol	15.65	19.65
Bra007513.1-P	Field mustard	cytosol	15.39	19.36
Bra028525.1-P	Field mustard	cytosol	15.01	19.34
Bra003469.1-P	Field mustard	cytosol	13.99	19.13
Bra011458.1-P	Field mustard	cytosol	18.32	17.84
Bra031505.1-P	Field mustard	cytosol	12.98	17.83
Bra034579.1-P	Field mustard	cytosol	18.07	17.6
Bra036991.1-P	Field mustard	cytosol	17.68	17.22
Bra031502.1-P	Field mustard	cytosol	13.74	16.51
Bra027151.1-P	Field mustard	cytosol	13.87	16.15
Bra010250.1-P	Field mustard	cytosol	7.51	14.94
Bra038100.1-P	Field mustard	cytosol	14.38	13.78
Bra031707.1-P	Field mustard	cytosol	14.25	12.24
Bra017901.1-P	Field mustard	cytosol	13.99	11.64
Bra018449.1-P	Field mustard	cytosol	13.49	11.61
Bra019950.1-P	Field mustard	cytosol	13.61	11.4
Bra035433.1-P	Field mustard	cytosol	13.99	10.99
Bra037604.1-P	Field mustard	plastid	10.69	10.91
Bra031511.1-P	Field mustard	cytosol	8.27	10.52

Protein Annotations

MapMan:13.6.1.3	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra038229	EnsemblPlants:Bra038229.1	EnsemblPlants:Bra038229.1-P	InterPro:Dynamin_GTPase
InterPro:Dynamin_SF	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005515	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005777	GO:GO:0007623	GO:GO:0008150	GO:GO:0009507	GO:GO:0009536	GO:GO:0009707
GO:GO:0009987	GO:GO:0010020	GO:GO:0016020	GO:GO:0016043	GO:GO:0016559	GO:GO:0016787
GO:GO:0042802	InterPro:G_DYNAMIN_dom	InterPro:IPR030381	UniProt:M4FAW4	InterPro:P-loop_NTPase	PFAM:PF00350
PRINTS:PR00195	PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF78	SMART:SM00053	SUPFAM:SSF52540
UniParc:UPI0002544AD2	SEG:seg	:	:	:	:

Description

AT3G19720 (E=0.0) ARC5 | ARC5 (ACCUMULATION AND REPLICATION OF CHLOROPLAST 5); GTP binding / GTPase

Coordinates

chrA01:+:21440811..21445323

Molecular Weight (calculated)

87829.1 Da

IEP (calculated)

6.471

GRAVY (calculated)

-0.298

Length

786 amino acids

Sequence
(BLAST)

001: MSSDSSAPKS VTVEEMAAEE DAAIEERYSL YEAYNELHAL AQELETPFEA PAVLVVGQQT DGKSALVEAL MGFQFNHVGG GTKTRRPITL HMKYDPQCQF
101: PLCHLGSDDD PSVALPKSLS QIQAYIEAEN MRLEQEPSPF SAKEIIVKVQ YKYCPNLTII DTPGLIAPAP GLKNRALQVQ ARAVEALVRA KMQHKEFIIL
201: CLEDSSDWSI ATTRRIVMQV DPELSRTIVV STKLDTKIPQ FSCSSDVEVF LSPPASALDS SLLGDSPFFT SVPSGRVGYG HDSVYKSNDE FKQAVSLREI
301: EDIASLEKKL GRVLTKQEKN RIGVSKLRLF LEELLWKRYK ESVPLIIPLL GKEYRSTVRK LDTVSKELSS LDEAKLKERG RTFHDLFLTK LSLLLKGTVV
401: APPDKFGETL QDERTQGGSF VGTDGLQFPH KLIPNAGMRL YGGAQYHRAM AEFRFLVGAI KCPPITREEI VNACGVEDIH DGTNYSRTAC VIAVAKARDT
501: FEPFLHQLGA RLLHILKRLL PISVYLLQKE GEYLSGHEVF LKRVASAFNS FVESTEKSCR DKCMEDLAST TRYVTWSLHN KNRAGLRQFL DSFGGTEQVA
601: TSGNPLGFSL PQDAPGGTTD TKARSDVKLS QLASNIDSGS SLQTTETRLA DLLDSTLWNR KLAPSSERIV YALVQQIFQG IREYFLASAE LKFNCFLLMP
701: IVDKLPALLR EELENAFEDD LDSIFDITNL RQSLDQKKRS TEIELRRIKR IKEKFRVMNE KLNSHEFAQN LDPSSLQTCS SDSKSS

Best Arabidopsis Sequence Match ( AT3G19720.1 )
(BLAST)

001: MAEVSAKSVT VEEMAEEDDA AIEERWSLYE AYNELHALAQ ELETPFEAPA VLVVGQQTDG KSALVEALMG FQFNHVGGGT KTRRPITLHM KYDPQCQFPL
101: CHLGSDDDPS VSLPKSLSQI QAYIEAENMR LEQEPCSPFS AKEIIVKVQY KYCPNLTIID TPGLIAPAPG LKNRALQVQA RAVEALVRAK MQHKEFIILC
201: LEDSSDWSIA TTRRIVMQVD PELSRTIVVS TKLDTKIPQF SCSSDVEVFL SPPASALDSS LLGDSPFFTS VPSGRVGYGQ DSVYKSNDEF KQAVSLREME
301: DIASLEKKLG RLLTKQEKSR IGISKLRLFL EELLWKRYKE SVPLIIPLLG KEYRSTVRKL DTVSKELSSL DEAKLKERGR TFHDLFLTKL SLLLKGTVVA
401: PPDKFGETLQ DERTQGGAFV GTDGLQFSHK LIPNAGMRLY GGAQYHRAMA EFRFLVGAIK CPPITREEIV NACGVEDIHD GTNYSRTACV IAVAKARETF
501: EPFLHQLGAR LLHILKRLLP ISVYLLQKEG EYLSGHEVFL KRVASAFNSF VESTEKSCRD KCMEDLASTT RYVTWSLHNK NRAGLRQFLD SFGGTEHNTT
601: SGNAIGFSLP QDALGGTTDT KSRSDVKLSH LASNIDSGSS IQTTEMRLAD LLDSTLWNRK LAPSSERIVY ALVQQIFQGI REYFLASAEL KFNCFLLMPI
701: VDKLPALLRE ELENAFEDDL DSIFDITNLR QSLDQKKRST EIELRRIKRI KEKFRVMNEK LNSHEFAQNL KAPSVQH

Arabidopsis Description

ARC5Dynamin-like protein ARC5 [Source:UniProtKB/Swiss-Prot;Acc:Q84N64]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.