Factsheet for GSMUA_Achr10P16060_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0055g00490.t01	Wine grape	cytosol	79.82	70.12
KRH42202	Soybean	nucleus	75.99	68.71
PGSC0003DMT400014025	Potato	cytosol	76.73	67.57
Solyc10g047050.1.1	Tomato	nucleus	76.29	67.19
CDY33414	Canola	cytosol	72.61	63.45
AT3G19720.1	Thale cress	cytosol	72.46	63.32
Bra038229.1-P	Field mustard	cytosol	72.46	62.6
CDY42203	Canola	cytosol	72.46	62.6
KRH58326	Soybean	plasma membrane	45.95	62.53
GSMUA_AchrUn_...	Banana	cytosol	15.61	16.85
GSMUA_Achr2P18210_001	Banana	cytosol	15.02	16.69
GSMUA_Achr8P27540_001	Banana	cytosol	14.87	16.58
GSMUA_Achr1P04880_001	Banana	cytosol	14.87	16.56
GSMUA_Achr11P...	Banana	cytosol	14.87	16.45
GSMUA_Achr6P26600_001	Banana	cytosol	14.58	16.26
GSMUA_Achr7P11190_001	Banana	cytosol	14.58	16.18
GSMUA_Achr2P21630_001	Banana	cytosol	14.43	16.09
GSMUA_Achr8P19650_001	Banana	cytosol, mitochondrion	11.78	14.36
GSMUA_Achr8P08760_001	Banana	cytosol	15.91	14.03
GSMUA_Achr10P...	Banana	cytosol	15.76	13.67
GSMUA_Achr2P09480_001	Banana	plastid	13.84	11.49
GSMUA_Achr1P18350_001	Banana	cytosol	12.67	9.62
GSMUA_Achr3P01090_001	Banana	nucleus	12.67	9.37
GSMUA_Achr4P20040_001	Banana	cytosol	12.67	9.36
GSMUA_Achr7P05530_001	Banana	nucleus	12.52	9.23

Protein Annotations

MapMan:13.6.1.3	Gene3D:3.40.50.300	ncoils:Coil	InterPro:Dynamin_SF	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005777	GO:GO:0007623	GO:GO:0008150	GO:GO:0009507	GO:GO:0009536
GO:GO:0009707	GO:GO:0009987	GO:GO:0010020	GO:GO:0016020	GO:GO:0016043	GO:GO:0016559
GO:GO:0042802	EnsemblPlantsGene:GSMUA_Achr10G16060_001	EnsemblPlants:GSMUA_Achr10P16060_001	EnsemblPlants:GSMUA_Achr10T16060_001	InterPro:G_DYNAMIN_dom	InterPro:IPR030381
UniProt:M0RIN1	InterPro:P-loop_NTPase	PFAM:PF00350	PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF78
SUPFAM:SSF52540	UniParc:UPI000296D114	SEG:seg	:	:	:

Description

Putative Dynamin-like protein C [Source:GMGC_GENE;Acc:GSMUA_Achr10G16060_001]

Coordinates

chr10:-:23735129..23742826

Molecular Weight (calculated)

77264.2 Da

IEP (calculated)

7.573

GRAVY (calculated)

-0.319

Length

679 amino acids

Sequence
(BLAST)

001: MKYNPGYRVP VCRLVSDADP AVASRMSLPE IQAYIEAENM RLESDPCQFS EKEIIIRIEY KYCPNLTIID TPGLIIPAPG RRNRTLQGQA RAVEALVRAK
101: MQHKELIILC LEDCSDWSNA TTRRIVMQID PELSRTVIVS TKLDTKILQF ARASDVEVFL KPPACTLDGC LLGGSPFFTS VPSGRVGSGS EAIYRSNEEF
201: KKAICLREME DIVALEGKLG RSLSKEERSR IGVSSLRLFL EELLQKRYMD NVPLIIPLLE KELRSTTRKI RETNQEFRNL DEAKLKEKGR AFHDSFLTKL
301: SLLLKGTVVA PPDKFGETLL DERTMGGPFT GTDSLQLPHK MMPNAGMRLY GGAQYHRAMA EFRLVVGGVK CPPITREEIV NACGVEDIHD GTNYSRTACV
401: IAVAKARDTF EPFLHQLGFR LLYILKRLLP ISMYLLQKDG EYLSGHEVFL RRVETAFNNF AESTERSCRE KCMEDLVSTT RYVTWSLHNK NRAGLCQFLD
501: SFASSEQYSA STISSGVQQE QYLALNDNKS DRSKPDSKPN HSNPCSDSIP CNPTAETRLV DLLDSTLWNR RLAPSSERIV YALVYQIFHG IKEHFLVSTE
601: LKFNCFFLMP VVDKLPALLW EDLESAFGDD LDQIFDITQL RHSLGQRKRE LEIELKRLQR LKEKFREINE QLSSYLVRP

Best Arabidopsis Sequence Match ( AT3G19720.1 )
(BLAST)

001: MAEVSAKSVT VEEMAEEDDA AIEERWSLYE AYNELHALAQ ELETPFEAPA VLVVGQQTDG KSALVEALMG FQFNHVGGGT KTRRPITLHM KYDPQCQFPL
101: CHLGSDDDPS VSLPKSLSQI QAYIEAENMR LEQEPCSPFS AKEIIVKVQY KYCPNLTIID TPGLIAPAPG LKNRALQVQA RAVEALVRAK MQHKEFIILC
201: LEDSSDWSIA TTRRIVMQVD PELSRTIVVS TKLDTKIPQF SCSSDVEVFL SPPASALDSS LLGDSPFFTS VPSGRVGYGQ DSVYKSNDEF KQAVSLREME
301: DIASLEKKLG RLLTKQEKSR IGISKLRLFL EELLWKRYKE SVPLIIPLLG KEYRSTVRKL DTVSKELSSL DEAKLKERGR TFHDLFLTKL SLLLKGTVVA
401: PPDKFGETLQ DERTQGGAFV GTDGLQFSHK LIPNAGMRLY GGAQYHRAMA EFRFLVGAIK CPPITREEIV NACGVEDIHD GTNYSRTACV IAVAKARETF
501: EPFLHQLGAR LLHILKRLLP ISVYLLQKEG EYLSGHEVFL KRVASAFNSF VESTEKSCRD KCMEDLASTT RYVTWSLHNK NRAGLRQFLD SFGGTEHNTT
601: SGNAIGFSLP QDALGGTTDT KSRSDVKLSH LASNIDSGSS IQTTEMRLAD LLDSTLWNRK LAPSSERIVY ALVQQIFQGI REYFLASAEL KFNCFLLMPI
701: VDKLPALLRE ELENAFEDDL DSIFDITNLR QSLDQKKRST EIELRRIKRI KEKFRVMNEK LNSHEFAQNL KAPSVQH

Arabidopsis Description

ARC5Dynamin-like protein ARC5 [Source:UniProtKB/Swiss-Prot;Acc:Q84N64]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.