Factsheet for GSMUA_Achr11P23180_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P18210_001	Banana	cytosol	93.81	94.27
VIT_15s0021g00480.t01	Wine grape	cytosol	88.6	87.88
Os10t0567800-01	Rice	plasma membrane	87.46	86.89
KRH46533	Soybean	cytosol, endoplasmic reticulum, nucleus	86.64	86.36
Solyc01g088510.2.1	Tomato	nucleus	71.17	85.35
PGSC0003DMT400004319	Potato	cytosol	85.18	85.18
GSMUA_AchrUn_...	Banana	cytosol	87.13	85.06
KRH48908	Soybean	cytosol, nucleus	84.85	84.3
KXG38886	Sorghum	cytosol	86.32	84.13
Zm00001d030005_P002	Maize	cytosol, mitochondrion	54.89	83.83
PGSC0003DMT400028286	Potato	cytosol	83.39	83.66
KRH66384	Soybean	cytosol, endoplasmic reticulum	84.04	83.5
GSMUA_Achr2P21630_001	Banana	cytosol	81.92	82.59
Solyc10g062160.1.1	Tomato	plastid	78.66	82.56
GSMUA_Achr7P11190_001	Banana	cytosol	82.08	82.35
TraesCS1B01G227700.1	Wheat	cytosol	83.39	81.92
TraesCS1D01G216700.2	Wheat	cytosol	83.39	81.92
TraesCS1A01G213900.2	Wheat	cytosol	83.22	81.76
CDY41188	Canola	cytosol	82.74	81.28
AT3G60190.1	Thale cress	cytosol	82.57	81.25
Bra007513.1-P	Field mustard	cytosol	82.57	81.12
CDX71832	Canola	cytosol	82.57	81.12
Bra014507.1-P	Field mustard	cytosol	82.57	80.99
CDX89053	Canola	cytosol	82.57	80.99
CDY42672	Canola	cytosol	82.41	80.96
PGSC0003DMT400004228	Potato	cytosol	35.67	77.39
CDY30477	Canola	cytosol	77.2	76.7
Bra037643.1-P	Field mustard	cytosol	77.04	76.54
CDY23444	Canola	cytosol	77.04	76.54
AT2G44590.3	Thale cress	cytosol	76.22	76.47
HORVU1Hr1G054560.1	Barley	mitochondrion	83.22	74.27
GSMUA_Achr6P26600_001	Banana	cytosol	73.45	74.06
GSMUA_Achr8P27540_001	Banana	cytosol	71.99	72.58
GSMUA_Achr1P04880_001	Banana	cytosol	70.68	71.15
GSMUA_Achr10P...	Banana	cytosol	36.32	28.48
GSMUA_Achr8P08760_001	Banana	cytosol	29.97	23.9
GSMUA_Achr8P19650_001	Banana	cytosol, mitochondrion	21.17	23.34
GSMUA_Achr1P18350_001	Banana	cytosol	29.8	20.47
GSMUA_Achr3P01090_001	Banana	nucleus	30.13	20.15
GSMUA_Achr4P20040_001	Banana	cytosol	29.8	19.91
GSMUA_Achr7P05530_001	Banana	nucleus	29.48	19.65
GSMUA_Achr2P09480_001	Banana	plastid	21.34	16.01
GSMUA_Achr10P...	Banana	cytosol	16.45	14.87

Protein Annotations

Gene3D:1.20.120.1240	MapMan:22.1.7.1	Gene3D:3.40.50.300	InterPro:Dynamin_GTPase	InterPro:Dynamin_GTPase_CS	InterPro:Dynamin_SF
InterPro:Dynamin_central	InterPro:GED	InterPro:GED_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr11G23180_001	EnsemblPlants:GSMUA_Achr11P23180_001
EnsemblPlants:GSMUA_Achr11T23180_001	InterPro:G_DYNAMIN_dom	InterPro:IPR020850	InterPro:IPR030381	UniProt:M0RUP8	InterPro:P-loop_NTPase
PFAM:PF00350	PFAM:PF01031	PFAM:PF02212	PRINTS:PR00195	ScanProsite:PS00410	PFscan:PS51388
PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF77	SMART:SM00053	SMART:SM00302	SUPFAM:SSF52540
UniParc:UPI000296252E	SEG:seg	:	:	:	:

Description

Dynamin-related protein 1E [Source:GMGC_GENE;Acc:GSMUA_Achr11G23180_001]

Coordinates

chr11:+:23197956..23209587

Molecular Weight (calculated)

68798.7 Da

IEP (calculated)

7.992

GRAVY (calculated)

-0.322

Length

614 amino acids

Sequence
(BLAST)

001: MTTMESLIGL VNRIQRACTV LGDHGGADGT LPTLWEALPS VAVVGGQSSG KSSVLESIVG RDFLPRGSGI VTRRPLVLQL HKTEEGRPEY AEFLHLPNRR
101: FTDFSLVRKE IQDETDRLTG KTKQISPVPI HLSIYSPFVV NLTLIDLPGL TKVAVEGQPD SIVHDIENMV QSYVEKPNCI ILAISPANQD IATSDAIKLA
201: REVDPTGERT FGVLTKLDLM DKGTNALDVL EGRAYRLQHP WVGIVNRSQA DINKNIDMIV ARRKEKEYFA TSPEYSHLSS KMGSEYLAKL LSRHLESVIR
301: ARIPSITSLI NKTIDELESE MDHLGRPIAV DAGAQLHTIL ELCRAFDKIF KEHLDGGRPG GDRIYGVFDH QLPAALKKLP FDRHLSLQNV RKVVSEADGY
401: QPHLIAPEQG YRRLIESALN YFRGPAEASV DAVHFVLKEL VRKSIGETQE LKRFPSLQAE LAAASHEALE RFREDSRKTV LRLVDMEASY LTVDFFRKLP
501: QEVEKTGSPA APTIDRYTDG HLRRIASNVS SYISMVSQTL KNSIPKAAVY CQVREAKRSL LNHFYTQVGK KEGKQLSQLL DEDPALMERR LQCAKRLELY
601: KNARDEIDAV SWAR

Best Arabidopsis Sequence Match ( AT3G60190.1 )
(BLAST)

001: MTTMESLIGL VNRIQRACTV LGDYGGGTGS NAFNSLWEAL PTVAVVGGQS SGKSSVLESI VGRDFLPRGS GIVTRRPLVL QLHKTDDGTE EYAEFLHLPK
101: KQFTDFALVR REIQDETDRI TGKNKQISPV PIHLSIYSPN VVNLTLIDLP GLTKVAVEGQ PETIAEDIES MVRTYVDKPN CIILAISPAN QDIATSDAIK
201: LAKDVDPTGE RTFGVLTKLD LMDKGTNALE VLEGRSYRLQ HPWVGIVNRS QADINKNVDM MLARRKEREY FDTSPDYGHL ASKMGSEYLA KLLSKHLESV
301: IRTRIPSILS LINKSIEELE RELDRMGRPV AVDAGAQLYT ILEMCRAFDK IFKEHLDGGR PGGDRIYGVF DNQLPAALKK LPFDRHLSLQ SVKKIVSEAD
401: GYQPHLIAPE QGYRRLIEGA LGYFRGPAEA SVDAVHYVLK ELVRKSISET EELKRFPSLQ VELAAAANSS LEKFREESKK SVIRLVDMES AYLTAEFFRK
501: LPQEIERPVT NSKNQTASPS SATLDQYGDG HFRRIASNVS AYVNMVSDTL RNTIPKACVY CQVRQAKLAL LNYFYSQISK REGKQLGQLL DEDPALMDRR
601: LECAKRLELY KKARDEIDAV AWVR

Arabidopsis Description

DRP1EDynamin-related protein 1E [Source:UniProtKB/Swiss-Prot;Acc:Q9FNX5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.