Factsheet for Zm00001d030005_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400004228	Potato	cytosol	52.24	74.2
KXG38886	Sorghum	cytosol	98.76	63.02
Solyc01g088510.2.1	Tomato	nucleus	79.35	62.3
Os10t0567800-01	Rice	plasma membrane	90.8	59.06
TraesCS1D01G216700.2	Wheat	cytosol	86.57	55.68
TraesCS1A01G213900.2	Wheat	cytosol	86.57	55.68
TraesCS1B01G227700.1	Wheat	cytosol	86.32	55.52
GSMUA_Achr2P18210_001	Banana	cytosol	83.58	54.99
GSMUA_Achr11P...	Banana	cytosol	83.83	54.89
VIT_15s0021g00480.t01	Wine grape	cytosol	80.85	52.5
PGSC0003DMT400004319	Potato	cytosol	79.6	52.12
KRH48908	Soybean	cytosol, nucleus	79.35	51.62
KRH46533	Soybean	cytosol, endoplasmic reticulum, nucleus	78.61	51.3
PGSC0003DMT400028286	Potato	cytosol	77.86	51.14
KRH66384	Soybean	cytosol, endoplasmic reticulum	77.86	50.65
HORVU1Hr1G054560.1	Barley	mitochondrion	86.07	50.29
Zm00001d013426_P002	Maize	plasma membrane	74.63	49.1
Solyc10g062160.1.1	Tomato	plastid	71.14	48.89
AT3G60190.1	Thale cress	cytosol	75.62	48.72
Zm00001d033751_P003	Maize	plasma membrane	73.88	48.61
CDY41188	Canola	cytosol	75.12	48.32
CDX71832	Canola	cytosol	75.12	48.32
CDX89053	Canola	cytosol	75.12	48.24
Bra014507.1-P	Field mustard	cytosol	75.12	48.24
CDY42672	Canola	cytosol	74.88	48.16
Bra007513.1-P	Field mustard	cytosol	74.63	48.0
Zm00001d005306_P002	Maize	cytosol, extracellular, mitochondrion	72.89	46.66
AT2G44590.3	Thale cress	cytosol	70.4	46.24
CDY23444	Canola	cytosol	69.9	45.47
CDY30477	Canola	cytosol	69.65	45.31
Bra037643.1-P	Field mustard	cytosol	69.15	44.98
Zm00001d009504_P002	Maize	cytosol	63.43	38.87
Zm00001d038955_P001	Maize	cytosol, mitochondrion, plasma membrane	63.68	38.21
Zm00001d042338_P002	Maize	extracellular, mitochondrion	26.37	12.97
Zm00001d012027_P002	Maize	cytosol	26.87	12.71
Zm00001d037279_P005	Maize	plasma membrane	28.86	12.71
Zm00001d044757_P006	Maize	cytosol, nucleus, plasma membrane	28.61	12.6
Zm00001d017979_P002	Maize	extracellular, mitochondrion	28.61	12.49
Zm00001d051815_P002	Maize	cytosol	15.67	11.48
Zm00001d032256_P001	Maize	cytosol	25.12	10.86
Zm00001d028497_P001	Maize	cytosol	15.92	10.26
Zm00001d028495_P001	Maize	cytosol	15.42	9.2
Zm00001d004012_P001	Maize	cytosol	22.14	8.14
Zm00001d023583_P005	Maize	plastid	14.18	7.52
Zm00001d012752_P006	Maize	plastid	14.68	7.03
Zm00001d043451_P001	Maize	plastid	14.18	6.93

Protein Annotations

Gene3D:1.20.120.1240	MapMan:22.1.7.1	Gene3D:3.40.50.300	UniProt:A0A1D6K8W1	InterPro:Dynamin_SF	InterPro:Dynamin_central
InterPro:GED	InterPro:GED_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:IPR020850	ProteinID:ONL99959.1	InterPro:P-loop_NTPase
PFAM:PF01031	PFAM:PF02212	PFscan:PS51388	PANTHER:PTHR11566	PANTHER:PTHR11566:SF77	SMART:SM00302
SUPFAM:SSF52540	UniParc:UPI00084434AF	EnsemblPlantsGene:Zm00001d030005	EnsemblPlants:Zm00001d030005_P002	EnsemblPlants:Zm00001d030005_T002	:

Description

Dynamin-related protein 1E

Coordinates

chr1:-:98585427..98594780

Molecular Weight (calculated)

45631.5 Da

IEP (calculated)

8.550

GRAVY (calculated)

-0.481

Length

402 amino acids

Sequence
(BLAST)

001: MDKGTNALDV LEGRAYRLQH PWVGIVNRSQ ADINKNVDMI IARRKEQEFF DSSPEYSHLA SRMGSEYLAK LLSQHLEAAI RSRIPSITSL INKTIDELES
101: EMDHLGRPIA SDAGAQLYLI LELCRAFDKI FKEHLDGGRP GGDRIYGVFD NQLPSALRKL PFDRHLSVQN VKRVVSQADG YQPHLIAPEQ GYRRLIESSL
201: NYFRGPAEAS VDAVHSVLKE LVRISIGETQ ELKRFPSLQT ELAAACYKAL ERFREDGRKT TLRLVDMESA YLTVEFFRKL PQEVDKTGTG NPRNANPPAP
301: SDDRYADAHF RRIASNVSSY IGMVSETLKN TIPKSVVHCQ VREAKRSLLN HFYTQVGGKD AKQLAVLLDE DPALMERRLQ CFKRLELYKS ARDEIDAVSW
401: TR

Best Arabidopsis Sequence Match ( AT1G14830.1 )
(BLAST)

001: MATMKSLIGL INKIQRACTV LGDHGGEGMS LWEALPTVAV VGGQSSGKSS VLESVVGRDF LPRGSGIVTR RPLVLQLHKT EDGTTEYAEF LHAPKKRFAD
101: FAAVRKEIED ETDRITGKSK QISNIPIQLS IYSPNVVNLT LIDLPGLTKV AVDGQPESIV QDIENMVRSY VEKPNCIILA ISPANQDIAT SDAIKLAREV
201: DPTGERTFGV ATKLDIMDKG TDCLDVLEGR SYRLQHPWVG IVNRSQADIN KRVDMIAARR KEQEYFETSP EYGHLASRMG SEYLAKLLSQ HLETVIRQKI
301: PSIVALINKS IDEINAELDR IGRPIAVDSG AQLYTILELC RAFDRVFKEH LDGGRPGGDR IYGVFDHQLP AALKKLPFDR HLSTKNVQKV VSEADGYQPH
401: LIAPEQGYRR LIDGSISYFK GPAEATVDAV HFVLKELVRK SISETEELKR FPTLASDIAA AANEALERFR DESRKTVLRL VDMESSYLTV EFFRKLHLEP
501: EKEKPNPRNA PAPNADPYSD NHFRKIGSNV SAYINMVCDT LRNSLPKAVV YCQVREAKRS LLNFFYAQVG RKEKEKLGAM LDEDPQLMER RGTLAKRLEL
601: YKQARDDIDA VAWK

Arabidopsis Description

DRP1CDRP1C [Source:UniProtKB/TrEMBL;Acc:A0A178W4V6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.