Factsheet for HORVU1Hr1G054560.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G216700.2	Wheat	cytosol	88.23	97.12
TraesCS1A01G213900.2	Wheat	cytosol	88.23	97.12
TraesCS1B01G227700.1	Wheat	cytosol	88.08	96.96
Os10t0567800-01	Rice	plasma membrane	80.23	89.32
KXG38886	Sorghum	cytosol	79.22	86.51
Zm00001d030005_P002	Maize	cytosol, mitochondrion	50.29	86.07
GSMUA_Achr2P18210_001	Banana	cytosol	74.56	83.96
GSMUA_Achr11P...	Banana	cytosol	74.27	83.22
VIT_15s0021g00480.t01	Wine grape	cytosol	73.26	81.42
KRH46533	Soybean	cytosol, endoplasmic reticulum, nucleus	72.24	80.68
PGSC0003DMT400004319	Potato	cytosol	71.22	79.8
Solyc01g088510.2.1	Tomato	nucleus	59.16	79.49
KRH66384	Soybean	cytosol, endoplasmic reticulum	70.49	78.48
KRH48908	Soybean	cytosol, nucleus	70.49	78.48
PGSC0003DMT400028286	Potato	cytosol	69.62	78.27
AT3G60190.1	Thale cress	cytosol	70.2	77.4
CDX71832	Canola	cytosol	69.91	76.96
CDY41188	Canola	cytosol	69.77	76.8
Solyc10g062160.1.1	Tomato	plastid	65.12	76.58
Bra007513.1-P	Field mustard	cytosol	69.48	76.48
Bra014507.1-P	Field mustard	cytosol	69.33	76.2
CDX89053	Canola	cytosol	69.33	76.2
CDY42672	Canola	cytosol	69.04	76.0
CDY30477	Canola	cytosol	65.7	73.14
HORVU4Hr1G007880.11	Barley	cytosol	67.44	73.07
AT2G44590.3	Thale cress	cytosol	64.97	73.04
CDY23444	Canola	cytosol	65.55	72.98
Bra037643.1-P	Field mustard	cytosol	65.41	72.82
PGSC0003DMT400004228	Potato	cytosol	29.65	72.08
HORVU1Hr1G084970.2	Barley	plasma membrane	59.01	60.06
HORVU2Hr1G068810.3	Barley	cytosol	31.54	27.26
HORVU3Hr1G094260.4	Barley	cytosol	31.98	26.99
HORVU6Hr1G058700.1	Barley	cytosol	3.92	25.23
HORVU4Hr1G061820.3	Barley	plastid	22.09	22.35
HORVU7Hr1G040670.2	Barley	cytosol, nucleus, plasma membrane	27.03	20.62
HORVU6Hr1G077000.1	Barley	cytosol, mitochondrion, nucleus	27.47	19.46
HORVU3Hr1G071340.9	Barley	cytosol, plastid	18.17	14.57
HORVU5Hr1G092990.14	Barley	cytosol	3.92	10.19
HORVU4Hr1G074040.2	Barley	nucleus	3.78	10.16
HORVU4Hr1G073960.12	Barley	cytosol	4.8	8.27
HORVU1Hr1G001520.1	Barley	cytosol	1.02	7.78
HORVU2Hr1G095510.1	Barley	cytosol	0.87	6.82
HORVU2Hr1G095500.1	Barley	cytosol	1.02	5.93

Protein Annotations

Gene3D:1.20.120.1240	MapMan:22.1.7.1	Gene3D:3.40.50.300	UniProt:A0A287FNP6	InterPro:Dynamin_GTPase	InterPro:Dynamin_GTPase_CS
InterPro:Dynamin_SF	InterPro:Dynamin_central	InterPro:GED	InterPro:GED_dom	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:G_DYNAMIN_dom
EnsemblPlantsGene:HORVU1Hr1G054560	EnsemblPlants:HORVU1Hr1G054560.1	InterPro:IPR020850	InterPro:IPR030381	InterPro:P-loop_NTPase	PFAM:PF00350
PFAM:PF01031	PFAM:PF02212	PRINTS:PR00195	ScanProsite:PS00410	PFscan:PS51388	PFscan:PS51718
PANTHER:PTHR11566	PANTHER:PTHR11566:SF73	SMART:SM00053	SMART:SM00302	SUPFAM:SSF52540	UniParc:UPI000B462F55
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:402878801..402883607

Molecular Weight (calculated)

76316.4 Da

IEP (calculated)

7.623

GRAVY (calculated)

-0.277

Length

688 amino acids

Sequence
(BLAST)

001: VKLAVTNTGR RSRFSISTTA TPLCFLRPQG HLSRSSATPS LSLPPLPHLL EPSTPTARAA QMATMENVIE LVNRIQRACT VLGDHGGDGG AASLPALWEA
101: LPSVAVVGGQ VQSSGKSSVL ESIVGRDFLP RGSGIVTRRP LVLQLHKTEV GEQEYAEFLH APKRRFTDFA LVRNEIEDET DRLTGRSKQI SPVPIHLSIY
201: SPNVVNLTLI DLPGLTKVAT EGQPESIAQD IENMVRLYVE KPNCIILAIS PANQDIATSD AIKLARDVDP TGERTFGVLT KLDLMDKGTD ALDVLEGRAY
301: KLQHPWVGIV NRSQADINRN VDMIIAREKE QEFFVSSPEY AHLASRMGSE YLAKLLSQQL EAVIRARIPS ITSLINKTID ELESEMDHLG RPIGSDAGAQ
401: LYLVLELCRA FDKIFKEHLD GGRPGGDQIY WVFDNQLPAA LRKLPFDRYL SLQNVKRIVS QADGYQPHLI APEQGYRRLI DSGLSYFRGP AEASVDAVHN
501: VLKELVRKSI GETEELRRFP TLQAELAAAC YKALESFRQE GRKTTVRLVD MESAYLTVDF FRKLPQEVGR TGTGYPVDNA GTGPSTPGDR YSDTHFRRIA
601: SNVSSYIDMV SGTLKNTIPK AVVHCQVREA KRSLLNYFYI QVGSKDAKQL ALLLDEDPAL MGRRQQCFKR LELYKSARDE IDAVSWSR

Best Arabidopsis Sequence Match ( AT3G60190.1 )
(BLAST)

001: MTTMESLIGL VNRIQRACTV LGDYGGGTGS NAFNSLWEAL PTVAVVGGQS SGKSSVLESI VGRDFLPRGS GIVTRRPLVL QLHKTDDGTE EYAEFLHLPK
101: KQFTDFALVR REIQDETDRI TGKNKQISPV PIHLSIYSPN VVNLTLIDLP GLTKVAVEGQ PETIAEDIES MVRTYVDKPN CIILAISPAN QDIATSDAIK
201: LAKDVDPTGE RTFGVLTKLD LMDKGTNALE VLEGRSYRLQ HPWVGIVNRS QADINKNVDM MLARRKEREY FDTSPDYGHL ASKMGSEYLA KLLSKHLESV
301: IRTRIPSILS LINKSIEELE RELDRMGRPV AVDAGAQLYT ILEMCRAFDK IFKEHLDGGR PGGDRIYGVF DNQLPAALKK LPFDRHLSLQ SVKKIVSEAD
401: GYQPHLIAPE QGYRRLIEGA LGYFRGPAEA SVDAVHYVLK ELVRKSISET EELKRFPSLQ VELAAAANSS LEKFREESKK SVIRLVDMES AYLTAEFFRK
501: LPQEIERPVT NSKNQTASPS SATLDQYGDG HFRRIASNVS AYVNMVSDTL RNTIPKACVY CQVRQAKLAL LNYFYSQISK REGKQLGQLL DEDPALMDRR
601: LECAKRLELY KKARDEIDAV AWVR

Arabidopsis Description

DRP1EDynamin-related protein 1E [Source:UniProtKB/Swiss-Prot;Acc:Q9FNX5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.