Factsheet for HORVU4Hr1G073960.12

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi
MultiLoc:	cytosol
WoLF PSORT:	golgi
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G084970.2
HORVU4Hr1G007880.11
HORVU4Hr1G073960.12	plasma membrane
HORVU4Hr1G074040.2	plasma membrane
HORVU5Hr1G092990.14	plasma membrane
HORVU6Hr1G077000.1	plasma membrane
HORVU7Hr1G040670.2	plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G10290.1	HORVU4Hr1G073960.12	AT1G10290.1	25462567
AT1G10290.1	HORVU4Hr1G074040.2	AT1G10290.1	25462567
AT1G10290.1	HORVU5Hr1G092990.14	AT1G10290.1	25462567
AT1G10290.1	HORVU6Hr1G077000.1	AT1G10290.1	25462567
AT1G10290.1	HORVU7Hr1G040670.2	AT1G10290.1	25462567
AT1G10290.1	HORVU4Hr1G073960.12	AT1G59610.1	25462567
AT1G10290.1	HORVU4Hr1G074040.2	AT1G59610.1	25462567
AT1G10290.1	HORVU5Hr1G092990.14	AT1G59610.1	25462567
AT1G10290.1	HORVU6Hr1G077000.1	AT1G59610.1	25462567
AT1G10290.1	HORVU7Hr1G040670.2	AT1G59610.1	25462567
AT1G10290.1	HORVU4Hr1G073960.12	AT1G59610.1	25462567
AT1G10290.1	HORVU4Hr1G074040.2	AT1G59610.1	25462567
AT1G10290.1	HORVU5Hr1G092990.14	AT1G59610.1	25462567
AT1G10290.1	HORVU6Hr1G077000.1	AT1G59610.1	25462567
AT1G10290.1	HORVU7Hr1G040670.2	AT1G59610.1	25462567
AT1G59610.1	HORVU4Hr1G007880.11	AT1G14830.1	21798944
AT1G59610.1	HORVU4Hr1G073960.12	AT1G59610.1	25462567
AT1G59610.1	HORVU4Hr1G074040.2	AT1G59610.1	25462567
AT1G59610.1	HORVU5Hr1G092990.14	AT1G59610.1	25462567
AT1G59610.1	HORVU6Hr1G077000.1	AT1G59610.1	25462567
AT1G59610.1	HORVU7Hr1G040670.2	AT1G59610.1	25462567
AT1G59610.1	HORVU1Hr1G084970.2	AT5G42080.1	20231465

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G074040.2	Barley	nucleus	64.16	100.0
HORVU2Hr1G095510.1	Barley	cytosol	20.05	90.91
HORVU2Hr1G095500.1	Barley	cytosol	26.57	89.83
HORVU5Hr1G092990.14	Barley	cytosol	59.4	89.43
HORVU1Hr1G001520.1	Barley	cytosol	12.78	56.67
HORVU3Hr1G071340.9	Barley	cytosol, plastid	67.67	31.47
HORVU6Hr1G058700.1	Barley	cytosol	2.76	10.28
HORVU1Hr1G084970.2	Barley	plasma membrane	11.28	6.66
CDX94910	Canola	cytosol	7.77	6.53
HORVU4Hr1G061820.3	Barley	plastid	10.03	5.88
HORVU4Hr1G007880.11	Barley	cytosol	8.77	5.51
CDY20643	Canola	cytosol	8.52	5.37
CDY31035	Canola	cytosol	8.02	5.11
HORVU2Hr1G068810.3	Barley	cytosol	9.77	4.9
HORVU1Hr1G054560.1	Barley	mitochondrion	8.27	4.8
HORVU3Hr1G094260.4	Barley	cytosol	9.77	4.79
CDY27283	Canola	cytosol	8.27	4.33
CDX94909	Canola	mitochondrion	7.52	4.13
CDY45889	Canola	cytosol	9.27	4.02
KRH27552	Soybean	cytosol	9.27	4.01
AT1G10290.1	Thale cress	cytosol	9.02	3.94
CDY04455	Canola	cytosol	9.02	3.92
CDX93442	Canola	cytosol	8.77	3.84
Bra018449.1-P	Field mustard	cytosol	8.77	3.83
CDY34897	Canola	cytosol	8.77	3.83
Bra031707.1-P	Field mustard	cytosol	8.77	3.83
Bra017901.1-P	Field mustard	cytosol	9.02	3.81
GSMUA_Achr4P20040_001	Banana	cytosol	8.77	3.81
AT1G59610.1	Thale cress	cytosol	8.77	3.8
KRH36411	Soybean	endoplasmic reticulum, nucleus	8.77	3.8
HORVU7Hr1G040670.2	Barley	cytosol, nucleus, plasma membrane	8.52	3.77
CDY44550	Canola	cytosol	9.02	3.73
Bra019950.1-P	Field mustard	cytosol	8.77	3.73
HORVU6Hr1G077000.1	Barley	cytosol, mitochondrion, nucleus	9.02	3.71
VIT_18s0089g00350.t01	Wine grape	cytosol	8.52	3.65
Bra035433.1-P	Field mustard	cytosol	9.02	3.6
GSMUA_Achr7P05530_001	Banana	nucleus	8.27	3.58
GSMUA_Achr1P18350_001	Banana	cytosol	8.02	3.58
GSMUA_Achr3P01090_001	Banana	nucleus	8.02	3.49
VIT_15s0107g00170.t01	Wine grape	cytosol	1.25	2.13
VIT_19s0015g02240.t01	Wine grape	golgi, mitochondrion, plasma membrane	1.0	1.51
Zm00001d051815_P002	Maize	cytosol	1.75	1.28
VIT_00s0267g00020.t01	Wine grape	cytosol	0.5	1.27

Protein Annotations

EnsemblPlants:HORVU4Hr1G073960.12	EnsemblPlantsGene:HORVU4Hr1G073960	InterPro:Dynamin_SF	PANTHER:PTHR11566	PANTHER:PTHR11566:SF44	SEG:seg
UniParc:UPI000B46B83B	UniProt:A0A287PMX8	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chrchr4H:+:592222920..592230163

Molecular Weight (calculated)

44679.6 Da

IEP (calculated)

4.544

GRAVY (calculated)

-0.219

Length

399 amino acids

Sequence
(BLAST)

001: MSTQSCEIQP YAYVPDGPVE PYQPSWSMNL GYYHDSTEDL TPQYDNHAFE SGEYGGMASI FSSSSYPEQV EVYEQSYGDE YVSLEQNFQS NWNAFFEDTS
101: GITKLVDIDV LRHLHDGVKG GFNEDKFAPY IGFSCLRKYL ESELQKRYKE AAPATLALLE QRCSDVSMDL SRLDSKLQAT SDVSQLRRSA MLHVASICTH
201: LRALLDGAVD PAPEVWGKTT EEEQIHSGIN SWPSTSVPVK PPNSSLKLYG GAAFERVMHE FRSATYSMEC PQVSREKVAN ILLAHAGRGG SSGMTEAAAE
301: IARAAARSWL APRTETTCDR LAFVLQSLFD LAMERSRTDD SRLLFLSQAM MTWLSRVLES IPFESILLLF VYIQNQLYSI IVDTIYSSNF LLVDGIIVL

Best Arabidopsis Sequence Match ( AT1G53140.1 )
(BLAST)

001: MANSNTYLTT PTKTPSSRRN QQSQSKMQSH SKDPINAESR SRFEAYNRLQ AAAVAFGEKL PIPEIVAIGG QSDGKSSLLE ALLGFRFNVR EVEMGTRRPL
101: ILQMVHDLSA LEPRCRFQDE DSEEYGSPIV SATAVADVIR SRTEALLKKT KTAVSPKPIV MRAEYAHCPN LTIIDTPGFV LKAKKGEPET TPDEILSMVK
201: SLASPPHRIL LFLQQSSVEW CSSLWLDAVR EIDSSFRRTI VVVSKFDNRL KEFSDRGEVD RYLSASGYLG ENTRPYFVAL PKDRSTISND EFRRQISQVD
301: TEVIRHLREG VKGGFDEEKF RSCIGFGSLR DFLESELQKR YKEAAPATLA LLEERCSEVT DDMLRMDMKI QATSDVAHLR KAAMLYTASI SNHVGALIDG
401: AANPAPEQWG KTTEEERGES GIGSWPGVSV DIKPPNAVLK LYGGAAFERV IHEFRCAAYS IECPPVSREK VANILLAHAG RGGGRGVTEA SAEIARTAAR
501: SWLAPLLDTA CDRLAFVLGS LFEIALERNL NQNSEYEKKT ENMDGYVGFH AAVRNCYSRF VKNLAKQCKQ LVRHHLDSVT SPYSMACYEN NYHQGGAFGA
601: YNKFNQASPN SFCFELSDTS RDEPMKDQEN IPPEKNNGQE TTPGKGGESH ITVPETPSPD QPCEIVYGLV KKEIGNGPDG VGARKRMARM VGNRNIEPFR
701: VQNGGLMFAN ADNGMKSSSA YSEICSSAAQ HFARIREVLV ERSVTSTLNS GFLTPCRDRL VVALGLDLFA VNDDKFMDMF VAPGAIVVLQ NERQQLQKRQ
801: KILQSCLTEF KTVARSL

Arabidopsis Description

DRP5ADRP5A [Source:UniProtKB/TrEMBL;Acc:A0A178WBH9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.