Factsheet for VIT_00s0267g00020.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_15s0107g00170.t01	Wine grape	cytosol	70.7	47.23
VIT_19s0015g02240.t01	Wine grape	golgi, mitochondrion, plasma membrane	73.25	43.4
VIT_18s0089g00350.t01	Wine grape	cytosol	83.44	14.07
KXG25176	Sorghum	cytosol	61.15	12.77
GSMUA_Achr1P18350_001	Banana	cytosol	72.61	12.75
Os08t0425100-01	Rice	plasma membrane	61.15	12.53
GSMUA_Achr3P01090_001	Banana	nucleus	72.61	12.42
GSMUA_Achr7P05530_001	Banana	nucleus	71.34	12.16
GSMUA_Achr4P20040_001	Banana	cytosol	70.7	12.08
VIT_12s0035g01740.t01	Wine grape	cytosol	70.7	12.07
Os02t0738900-01	Rice	plasma membrane	65.61	11.16
Zm00001d017979_P002	Maize	extracellular, mitochondrion	64.33	10.97
EES05560	Sorghum	nucleus	63.69	10.86
Zm00001d044757_P006	Maize	cytosol, nucleus, plasma membrane	62.42	10.73
EER88160	Sorghum	cytosol, endoplasmic reticulum, nucleus	62.42	10.73
Os06t0247800-01	Rice	plasma membrane	61.15	10.54
Zm00001d037279_P005	Maize	plasma membrane	61.15	10.51
TraesCS6A01G312300.3	Wheat	nucleus	60.51	10.44
HORVU7Hr1G040670.2	Barley	cytosol, nucleus, plasma membrane	59.87	10.42
TraesCS7B01G104500.1	Wheat	golgi, unclear	59.87	10.41
TraesCS7D01G200900.1	Wheat	golgi, unclear	59.87	10.41
TraesCS7A01G198100.1	Wheat	cytosol, nucleus, plasma membrane	59.87	10.41
TraesCS6D01G291700.1	Wheat	nucleus	59.87	10.41
TraesCS6B01G342500.2	Wheat	cytosol	59.87	10.18
Zm00001d032256_P001	Maize	cytosol	59.87	10.11
HORVU6Hr1G077000.1	Barley	cytosol, mitochondrion, nucleus	59.87	9.68
VIT_02s0012g00740.t01	Wine grape	cytosol	25.48	6.53
VIT_15s0021g00480.t01	Wine grape	cytosol	24.84	6.3
VIT_02s0025g01570.t01	Wine grape	cytosol, extracellular	23.57	6.08
VIT_01s0011g05800.t01	Wine grape	cytosol	23.57	6.04
VIT_15s0046g00470.t01	Wine grape	cytosol	23.57	6.03
VIT_03s0038g00970.t01	Wine grape	cytosol	24.2	4.55
VIT_12s0055g00490.t01	Wine grape	cytosol	17.2	3.49
VIT_19s0014g02500.t01	Wine grape	plastid	17.2	3.22
VIT_04s0008g07010.t01	Wine grape	cytosol	12.74	3.09
VIT_03s0110g00120.t01	Wine grape	cytosol	1.91	1.21
HORVU4Hr1G074040.2	Barley	nucleus	1.27	0.78
HORVU5Hr1G092990.14	Barley	cytosol	1.27	0.75
HORVU4Hr1G073960.12	Barley	cytosol	1.27	0.5
VIT_03s0038g00540.t01	Wine grape	cytosol	0.0	0.0
VIT_02s0087g00010.t01	Wine grape	cytosol	0.0	0.0
Zm00001d051815_P002	Maize	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	EMBL:AM431861	ProteinID:CAN82445	ProteinID:CAN82445.1	ProteinID:CCB57312
ProteinID:CCB57312.1	InterPro:Dynamin_GTPase_CS	InterPro:Dynamin_SF	UniProt:F6HRK4	EMBL:FN596024	GO:GO:0000166
GO:GO:0000266	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005515
GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008017
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016787
InterPro:G_DYNAMIN_dom	InterPro:IPR030381	InterPro:P-loop_NTPase	PFAM:PF00350	PRINTS:PR00195	ScanProsite:PS00410
PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF136	SUPFAM:SSF52540	UniParc:UPI000210938E	ArrayExpress:VIT_00s0267g00020
EnsemblPlantsGene:VIT_00s0267g00020	EnsemblPlants:VIT_00s0267g00020.t01	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrUn:-:19507244..19507825

Molecular Weight (calculated)

16818.1 Da

IEP (calculated)

5.130

GRAVY (calculated)

-0.050

Length

157 amino acids

Sequence
(BLAST)

001: MDEDVDENSS SSSSHRGLTF LNVVALGNVS AGKSVVLNSL IGYPVLPTGE NGATRATICM DLQNDGSLSS KLIILQTNNK SQQASTSALR HSLYDRVGKG
101: ALGKSRDEIY LKLQICTTSL LKLVDLPGLD QRIMDETLVS DYAQHNDAIL LVIVPTA

Best Arabidopsis Sequence Match ( AT1G10290.1 )
(BLAST)

001: MEAIDELSQL SDSMKQAASL LADEDPDETS SSKRPATFLN VVALGNVGAG KSAVLNSLIG HPVLPTGENG ATRAPIIIEL SRESSLSSKA IILQIDNKSQ
101: QVSASALRHS LQDRLSKGAS GKNRDEINLK LRTSTAPPLK LVDLPGLDQR IVDESMIAEY AQHNDAILLV IVPASQASEI SSSRALKIAK EYDPESTRTI
201: GIIGKIDQAA ENSKALAAVQ ALLSNQGPPK TTDIPWVAVI GQSVSIASAQ SGSGENSLET AWRAESESLK SILTGAPQSK LGRIALVDTL ASQIRSRMKL
301: RLPSVLSGLQ GKSQIVQDEL ARLGEQLVNS AEGTRAIALE LCREFEDKFL LHLAGGEGSG WKVVASFEGN FPNRIKQLPL DRHFDLNNVK RVVLEADGYQ
401: PYLISPEKGL RSLIKIVLEL AKDPARLCVD EVHRVLVDIV SASANATPGL GRYPPFKREV VAIASAALDG FKNEAKKMVV ALVDMERAFV PPQHFIRLVQ
501: RRMERQRREE ELKGRSSKKG QDAEQSLLSR ATSPQPDGPT AGGSLKSMKD KPSPQDKETP EVSGLKTAGP EGEITAGYLM KKSAKTNGWS RRWFVLNEKT
601: GKLGYTKKQE ERNFRGTITL EECTIEEIPE DEVEKSKSSK DKKANGPDSK GPGLVFKITC KVPYKTVLKA HNALVLKAES VVDKNEWINK LQKVIQARGG
701: QVGSVSMRQS LSEGSLDKMV RKPIDPEEEL RWMSQEVRGY VEAVLNSLAA NVPKAVVLCQ VEKAKEDMLN QLYSSISAIG NERIESLIQE DQNVKRRRER
801: YQKQSSLLSK LTRQLSIHDN RAAAASSYSD NSGTESSPRA SGGSSGDDWM NAFNSAANGP SDSLSKYGSG GHSRRYSDPA QNGDAASPGS GSNRRTTPNR
901: LPPAPPPTGS AYRY

Arabidopsis Description

DRP2ADRP2A [Source:UniProtKB/TrEMBL;Acc:A0A178WBB3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.