Factsheet for VIT_12s0035g01740.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0087g00010.t01	Wine grape	cytosol	18.15	89.78
VIT_18s0089g00350.t01	Wine grape	cytosol	86.96	85.93
VIT_03s0110g00120.t01	Wine grape	cytosol	22.72	84.62
VIT_03s0038g00540.t01	Wine grape	cytosol	16.09	84.09
KRH01870	Soybean	endoplasmic reticulum	82.72	83.26
KRH51295	Soybean	endoplasmic reticulum	82.28	82.82
GSMUA_Achr1P18350_001	Banana	cytosol	80.22	82.55
GSMUA_Achr7P05530_001	Banana	nucleus	81.85	81.76
GSMUA_Achr4P20040_001	Banana	cytosol	81.3	81.39
Solyc11g039650.1.1	Tomato	cytosol, nucleus, plastid	81.2	81.28
GSMUA_Achr3P01090_001	Banana	nucleus	79.24	79.41
VIT_15s0107g00170.t01	Wine grape	cytosol	19.89	77.87
Solyc01g103130.1.1	Tomato	nucleus, unclear	50.65	76.77
VIT_00s0267g00020.t01	Wine grape	cytosol	12.07	70.7
Solyc01g103120.2.1	Tomato	cytosol	22.28	69.49
VIT_19s0015g02240.t01	Wine grape	golgi, mitochondrion, plasma membrane	20.0	69.43
VIT_02s0012g00740.t01	Wine grape	cytosol	19.24	28.87
VIT_01s0011g05800.t01	Wine grape	cytosol	19.02	28.55
VIT_15s0046g00470.t01	Wine grape	cytosol	18.91	28.34
VIT_15s0021g00480.t01	Wine grape	cytosol	19.02	28.27
VIT_02s0025g01570.t01	Wine grape	cytosol, extracellular	17.72	26.77
VIT_03s0038g00970.t01	Wine grape	cytosol	17.93	19.76
VIT_04s0008g07010.t01	Wine grape	cytosol	13.15	18.67
VIT_12s0055g00490.t01	Wine grape	cytosol	11.63	13.84
VIT_19s0014g02500.t01	Wine grape	plastid	11.52	12.65

Protein Annotations

Gene3D:1.20.120.1240	EntrezGene:100245514	wikigene:100245514	Gene3D:2.30.29.30	MapMan:22.1.7.2	Gene3D:3.40.50.300
ProteinID:CBI29646	ProteinID:CBI29646.3	ncoils:Coil	UniProt:D7TGM4	InterPro:Dynamin_GTPase	InterPro:Dynamin_GTPase_CS
InterPro:Dynamin_SF	InterPro:Dynamin_central	EMBL:FN595990	InterPro:GED	InterPro:GED_dom	GO:GO:0000166
GO:GO:0000266	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005515
GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008017
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016787
InterPro:G_DYNAMIN_dom	InterPro:IPR001849	InterPro:IPR011993	InterPro:IPR020850	InterPro:IPR030381	EntrezGene:LOC100245514
wikigene:LOC100245514	InterPro:P-loop_NTPase	PFAM:PF00169	PFAM:PF00350	PFAM:PF01031	PFAM:PF02212
InterPro:PH-like_dom_sf	InterPro:PH_domain	PRINTS:PR00195	ScanProsite:PS00410	PFscan:PS50003	PFscan:PS51388
PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF57	SMART:SM00053	SMART:SM00233	SUPFAM:SSF50729
SUPFAM:SSF52540	TIGR:TC58413	UniParc:UPI00015CB31A	ArrayExpress:VIT_12s0035g01740	EnsemblPlantsGene:VIT_12s0035g01740	EnsemblPlants:VIT_12s0035g01740.t01
unigene:Vvi.12643	RefSeq:XP_002268311	RefSeq:XP_002268311.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr12:+:21829858..21860136

Molecular Weight (calculated)

100133.0 Da

IEP (calculated)

9.747

GRAVY (calculated)

-0.536

Length

920 amino acids

Sequence
(BLAST)

001: MEAIDELVQL SDSMRQAAAL LADEDVDESA SSSKRPSTFL NVVALGNVGA GKSAVLNSLI GHPVLPTGEN GATRAPISID LNRDASVSSR SIILQIDNKS
101: QQVSASALRH SLQDRLSKSS SGKSRDEIYL KLRTSTAPPL KLIDLPGLDQ RIVDDSMISG YVQHNDAILL VITPAAQAPE ISSSRALRIA KEYDADSTRT
201: IGVISKIDQA AGEPKILAAV QALLSNQGPR STSDIPWVAL IGQSVSIASA QSGNAGSENS LETAWRAESE TLKSILPGAP QNKLGRVALV DALAQQIRNR
301: MKVRLPNLLS GLQGKSQIVQ EELVRLGEQM VDSVEGTRAI ALQLCREFED KFLQHLAHGE GSGWKVVASF EGNFPNRIKQ LPLDKHFDIN NVKRIVLEAD
401: GYQPYLISPE KGLRSLIKIV LELAKEPSRL CVDEVHRVLV DIVSAAANAT PGLGRYPPFK REVVAIASTA LEGFKNEAKK MVVALVDMER AFVPPQHFIR
501: LVQRRMDRQR REEEVKNRSS KKGLDAEQSI LNRATSPQTG GQQTGGSLKT MKDKSSQQDK EGQEGPALKT AGPGGEITAG FLLKRSAKTN GWSRRWFVLN
601: EKSSKLGYTK KQEERHFRGV INLEECNIEE IADEDEPPPK SSKSKKENGP EKSPSLVFKI TSKVPYKTVL KAHSAVVLKA ESAVDKAEWL NKLRNVIQPS
701: GQVKGESGLT MRQSLSDGSL DTMARRPADP EEELRWMSQE VRGYVEAVLN SLAANVPKAV VLCQVEKSKE DMLNQLYSSV SAQSTARIEE LLQEDQNVKR
801: RRERNQKQSS LLAKLTKQLS IHDNRAAAAS SSWSNGGAES SPRTPGPSSG DDWRSAFDAA ANGPTDSYSN SSRSGANGHS RRYSDPSQNG DANSGPNSGS
901: RRTPNRLPPA PPQSGSSYRY

Best Arabidopsis Sequence Match ( AT1G10290.1 )
(BLAST)

001: MEAIDELSQL SDSMKQAASL LADEDPDETS SSKRPATFLN VVALGNVGAG KSAVLNSLIG HPVLPTGENG ATRAPIIIEL SRESSLSSKA IILQIDNKSQ
101: QVSASALRHS LQDRLSKGAS GKNRDEINLK LRTSTAPPLK LVDLPGLDQR IVDESMIAEY AQHNDAILLV IVPASQASEI SSSRALKIAK EYDPESTRTI
201: GIIGKIDQAA ENSKALAAVQ ALLSNQGPPK TTDIPWVAVI GQSVSIASAQ SGSGENSLET AWRAESESLK SILTGAPQSK LGRIALVDTL ASQIRSRMKL
301: RLPSVLSGLQ GKSQIVQDEL ARLGEQLVNS AEGTRAIALE LCREFEDKFL LHLAGGEGSG WKVVASFEGN FPNRIKQLPL DRHFDLNNVK RVVLEADGYQ
401: PYLISPEKGL RSLIKIVLEL AKDPARLCVD EVHRVLVDIV SASANATPGL GRYPPFKREV VAIASAALDG FKNEAKKMVV ALVDMERAFV PPQHFIRLVQ
501: RRMERQRREE ELKGRSSKKG QDAEQSLLSR ATSPQPDGPT AGGSLKSMKD KPSPQDKETP EVSGLKTAGP EGEITAGYLM KKSAKTNGWS RRWFVLNEKT
601: GKLGYTKKQE ERNFRGTITL EECTIEEIPE DEVEKSKSSK DKKANGPDSK GPGLVFKITC KVPYKTVLKA HNALVLKAES VVDKNEWINK LQKVIQARGG
701: QVGSVSMRQS LSEGSLDKMV RKPIDPEEEL RWMSQEVRGY VEAVLNSLAA NVPKAVVLCQ VEKAKEDMLN QLYSSISAIG NERIESLIQE DQNVKRRRER
801: YQKQSSLLSK LTRQLSIHDN RAAAASSYSD NSGTESSPRA SGGSSGDDWM NAFNSAANGP SDSLSKYGSG GHSRRYSDPA QNGDAASPGS GSNRRTTPNR
901: LPPAPPPTGS AYRY

Arabidopsis Description

DRP2ADRP2A [Source:UniProtKB/TrEMBL;Acc:A0A178WBB3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.