Factsheet for VIT_02s0087g00010.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0110g00120.t01	Wine grape	cytosol	93.55	70.45
VIT_03s0038g00540.t01	Wine grape	cytosol	59.68	63.07
Solyc01g103120.2.1	Tomato	cytosol	61.29	38.64
VIT_12s0035g01740.t01	Wine grape	cytosol	89.78	18.15
VIT_18s0089g00350.t01	Wine grape	cytosol	79.03	15.79
Solyc11g039650.1.1	Tomato	cytosol, nucleus, plastid	74.19	15.02
GSMUA_Achr1P18350_001	Banana	cytosol	72.04	14.99
GSMUA_Achr3P01090_001	Banana	nucleus	73.12	14.81
GSMUA_Achr4P20040_001	Banana	cytosol	73.12	14.8
GSMUA_Achr7P05530_001	Banana	nucleus	70.97	14.33
KRH01870	Soybean	endoplasmic reticulum	69.35	14.11
KRH51295	Soybean	endoplasmic reticulum	69.35	14.11
VIT_02s0012g00740.t01	Wine grape	cytosol	11.29	3.43
VIT_15s0046g00470.t01	Wine grape	cytosol	10.75	3.26
VIT_01s0011g05800.t01	Wine grape	cytosol	10.22	3.1
VIT_02s0025g01570.t01	Wine grape	cytosol, extracellular	9.68	2.96
VIT_15s0021g00480.t01	Wine grape	cytosol	9.68	2.91
VIT_04s0008g07010.t01	Wine grape	cytosol	9.68	2.78
VIT_03s0038g00970.t01	Wine grape	cytosol	12.37	2.75
VIT_19s0015g02240.t01	Wine grape	golgi, mitochondrion, plasma membrane	3.23	2.26
VIT_15s0107g00170.t01	Wine grape	cytosol	2.15	1.7
VIT_12s0055g00490.t01	Wine grape	cytosol	6.99	1.68
VIT_19s0014g02500.t01	Wine grape	plastid	4.84	1.07
Solyc01g103130.1.1	Tomato	nucleus, unclear	2.69	0.82
VIT_00s0267g00020.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

Gene3D:2.30.29.30	MapMan:35.1	ProteinID:CCB52259	ProteinID:CCB52259.1	ncoils:Coil	InterPro:Dynamin_SF
UniProt:F6HJ62	EMBL:FN595769	InterPro:GED	GO:GO:0000166	GO:GO:0000266	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005515	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987
GO:GO:0016043	GO:GO:0016787	InterPro:IPR001849	InterPro:IPR011993	PFAM:PF02212	InterPro:PH-like_dom_sf
InterPro:PH_domain	PFscan:PS50003	PANTHER:PTHR11566	PANTHER:PTHR11566:SF57	UniParc:UPI0002107F92	ArrayExpress:VIT_02s0087g00010
EnsemblPlantsGene:VIT_02s0087g00010	EnsemblPlants:VIT_02s0087g00010.t01	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2:-:17046954..17049219

Molecular Weight (calculated)

20591.8 Da

IEP (calculated)

9.858

GRAVY (calculated)

-0.504

Length

186 amino acids

Sequence
(BLAST)

001: MASPYCMCHL ECNIEEIADK DEPPPKSSKS KKKNGLEKSP SLVFKITSKV PYKTVLKAHS AVVLKAESAA DKAEWLNKLR NVIQPSGQVK GEFGLTMRQS
101: LFDGSLAVVL CQVEKSKEDM LNQLYSSVSA QSTARIEELL QEVQNVKRRR ERNQKQSSLL VKLTKQLSIH DNRAAAASSC WSNGGA

Best Arabidopsis Sequence Match ( AT1G10290.1 )
(BLAST)

001: MEAIDELSQL SDSMKQAASL LADEDPDETS SSKRPATFLN VVALGNVGAG KSAVLNSLIG HPVLPTGENG ATRAPIIIEL SRESSLSSKA IILQIDNKSQ
101: QVSASALRHS LQDRLSKGAS GKNRDEINLK LRTSTAPPLK LVDLPGLDQR IVDESMIAEY AQHNDAILLV IVPASQASEI SSSRALKIAK EYDPESTRTI
201: GIIGKIDQAA ENSKALAAVQ ALLSNQGPPK TTDIPWVAVI GQSVSIASAQ SGSGENSLET AWRAESESLK SILTGAPQSK LGRIALVDTL ASQIRSRMKL
301: RLPSVLSGLQ GKSQIVQDEL ARLGEQLVNS AEGTRAIALE LCREFEDKFL LHLAGGEGSG WKVVASFEGN FPNRIKQLPL DRHFDLNNVK RVVLEADGYQ
401: PYLISPEKGL RSLIKIVLEL AKDPARLCVD EVHRVLVDIV SASANATPGL GRYPPFKREV VAIASAALDG FKNEAKKMVV ALVDMERAFV PPQHFIRLVQ
501: RRMERQRREE ELKGRSSKKG QDAEQSLLSR ATSPQPDGPT AGGSLKSMKD KPSPQDKETP EVSGLKTAGP EGEITAGYLM KKSAKTNGWS RRWFVLNEKT
601: GKLGYTKKQE ERNFRGTITL EECTIEEIPE DEVEKSKSSK DKKANGPDSK GPGLVFKITC KVPYKTVLKA HNALVLKAES VVDKNEWINK LQKVIQARGG
701: QVGSVSMRQS LSEGSLDKMV RKPIDPEEEL RWMSQEVRGY VEAVLNSLAA NVPKAVVLCQ VEKAKEDMLN QLYSSISAIG NERIESLIQE DQNVKRRRER
801: YQKQSSLLSK LTRQLSIHDN RAAAASSYSD NSGTESSPRA SGGSSGDDWM NAFNSAANGP SDSLSKYGSG GHSRRYSDPA QNGDAASPGS GSNRRTTPNR
901: LPPAPPPTGS AYRY

Arabidopsis Description

DRP2ADRP2A [Source:UniProtKB/TrEMBL;Acc:A0A178WBB3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.