Factsheet for VIT_15s0046g00470.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0025g01570.t01	Wine grape	cytosol, extracellular	89.09	89.82
Solyc05g050600.2.1	Tomato	nucleus, plastid	87.46	88.18
Solyc01g095970.2.1	Tomato	plastid	85.99	86.56
GSMUA_Achr1P04880_001	Banana	cytosol	85.83	86.39
PGSC0003DMT400000646	Potato	cytosol	85.83	86.39
KRH47905	Soybean	cytosol, endoplasmic reticulum	82.74	83.42
Bra003469.1-P	Field mustard	cytosol	78.01	83.3
AT3G61760.1	Thale cress	cytosol	82.74	83.28
CDY25074	Canola	cytosol	82.57	83.11
CDX67862	Canola	cytosol	82.57	83.11
KRH06461	Soybean	cytosol	66.29	78.42
VIT_02s0012g00740.t01	Wine grape	cytosol	71.66	71.78
VIT_15s0021g00480.t01	Wine grape	cytosol	69.71	69.14
VIT_01s0011g05800.t01	Wine grape	cytosol	68.4	68.52
VIT_04s0008g07010.t01	Wine grape	cytosol	27.85	26.39
VIT_03s0038g00970.t01	Wine grape	cytosol	35.34	25.99
VIT_15s0107g00170.t01	Wine grape	cytosol	9.45	24.68
VIT_00s0267g00020.t01	Wine grape	cytosol	6.03	23.57
VIT_19s0015g02240.t01	Wine grape	golgi, mitochondrion, plasma membrane	9.28	21.51
VIT_18s0089g00350.t01	Wine grape	cytosol	29.48	19.44
VIT_12s0035g01740.t01	Wine grape	cytosol	28.34	18.91
VIT_12s0055g00490.t01	Wine grape	cytosol	19.38	15.39
VIT_19s0014g02500.t01	Wine grape	plastid	20.85	15.27
VIT_03s0110g00120.t01	Wine grape	cytosol	4.89	12.15
VIT_02s0087g00010.t01	Wine grape	cytosol	3.26	10.75
VIT_03s0038g00540.t01	Wine grape	cytosol	2.77	9.66

Protein Annotations

Gene3D:1.20.120.1240	EntrezGene:100255379	wikigene:100255379	MapMan:22.1.7.1	Gene3D:3.40.50.300	EMBL:AM444604
ProteinID:CAN71952	ProteinID:CAN71952.1	ProteinID:CBI40548	ProteinID:CBI40548.3	ncoils:Coil	UniProt:D7UCT3
InterPro:Dynamin_GTPase	InterPro:Dynamin_GTPase_CS	InterPro:Dynamin_SF	InterPro:Dynamin_central	EMBL:FN596755	InterPro:GED
InterPro:GED_dom	GO:GO:0000166	GO:GO:0000266	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005515	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787
InterPro:G_DYNAMIN_dom	InterPro:IPR020850	InterPro:IPR030381	EntrezGene:LOC100255379	wikigene:LOC100255379	InterPro:P-loop_NTPase
PFAM:PF00350	PFAM:PF01031	PFAM:PF02212	PRINTS:PR00195	ScanProsite:PS00410	PFscan:PS51388
PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF60	SMART:SM00053	SMART:SM00302	SUPFAM:SSF52540
UniParc:UPI000198621E	ArrayExpress:VIT_15s0046g00470	EnsemblPlantsGene:VIT_15s0046g00470	EnsemblPlants:VIT_15s0046g00470.t01	RefSeq:XP_002263342	RefSeq:XP_002263342.1
RefSeq:XP_003633970	RefSeq:XP_003633970.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr15:+:17423893..17430928

Molecular Weight (calculated)

68879.8 Da

IEP (calculated)

7.205

GRAVY (calculated)

-0.320

Length

614 amino acids

Sequence
(BLAST)

001: MENLISLVNK IQRACTALGD YGEESTLPTL WDALPAIAVV GGQSSGKSSV LESVVGKDFL PRGSGIVTRR PLVLQLHKID EGREDEGREY AEFLHLPRKR
101: FTDFAAVRQE ISDETDRETG RSKQISSVPI HLSIYSPNVV NLTLIDLPGL TKVAVEGQPD SIVHDIENMV RSFIEKPNCI ILAISPANQD LATSDAIKIS
201: REVDPRGERT FGVLTKIDLM DKGTDAVDIL EGKSYKLQFP WIGVVNRSQA DINKSVDMIA ARRREREYFS NSPEYKHLSH RMGSEHLGKM LSKHLETVIK
301: SRIPGLQSLI SKTIAELESE LSRLGKPIAS DAGGKLYMIM EICRCFDQIF KEHLDGIRPG GDKVYNVFDS QLPAALKRLQ FDKQLSMENV KKLITEADGY
401: QPHLIAPEQG YRRLIESSIV TIRGPAEAAV DAVHAILKDL VHKSISETLE LKQYPSLRVE VTNAACEALD RMKEESRRAT VQLVDMETSY LTVEFFRKLP
501: QDIEKGGNPT HSIFDRYNDS YLRRIGTTVL SYVTMVVASL RNSIPKSVVY CQVREAKRSL LDHFFADLGK KETKQLGSLL DEDPAVMQRR TNLAKRLELY
601: RSAQAEIDAV AWSK

Best Arabidopsis Sequence Match ( AT5G42080.1 )
(BLAST)

001: MENLISLVNK IQRACTALGD HGDSSALPTL WDSLPAIAVV GGQSSGKSSV LESIVGKDFL PRGSGIVTRR PLVLQLQKID DGTREYAEFL HLPRKKFTDF
101: AAVRKEIQDE TDRETGRSKA ISSVPIHLSI YSPNVVNLTL IDLPGLTKVA VDGQSDSIVK DIENMVRSYI EKPNCIILAI SPANQDLATS DAIKISREVD
201: PSGDRTFGVL TKIDLMDKGT DAVEILEGRS FKLKYPWVGV VNRSQADINK NVDMIAARKR EREYFSNTTE YRHLANKMGS EHLAKMLSKH LERVIKSRIP
301: GIQSLINKTV LELETELSRL GKPIAADAGG KLYSIMEICR LFDQIFKEHL DGVRAGGEKV YNVFDNQLPA ALKRLQFDKQ LAMDNIRKLV TEADGYQPHL
401: IAPEQGYRRL IESSIVSIRG PAEASVDTVH AILKDLVHKS VNETVELKQY PALRVEVTNA AIESLDKMRE GSKKATLQLV DMECSYLTVD FFRKLPQDVE
501: KGGNPTHSIF DRYNDSYLRR IGSNVLSYVN MVCAGLRNSI PKSIVYCQVR EAKRSLLDHF FAELGTMDMK RLSSLLNEDP AIMERRSAIS KRLELYRAAQ
601: SEIDAVAWSK

Arabidopsis Description

DRP1ARSW9 [Source:UniProtKB/TrEMBL;Acc:A0A178UEJ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.