Factsheet for VIT_03s0038g00540.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0087g00010.t01	Wine grape	cytosol	63.07	59.68
VIT_03s0110g00120.t01	Wine grape	cytosol	82.95	59.11
Solyc01g103120.2.1	Tomato	cytosol	61.36	36.61
VIT_12s0035g01740.t01	Wine grape	cytosol	84.09	16.09
VIT_18s0089g00350.t01	Wine grape	cytosol	74.43	14.07
GSMUA_Achr1P18350_001	Banana	cytosol	69.89	13.76
Solyc11g039650.1.1	Tomato	cytosol, nucleus, plastid	71.59	13.71
KRH01870	Soybean	endoplasmic reticulum	69.89	13.46
KRH51295	Soybean	endoplasmic reticulum	69.89	13.46
GSMUA_Achr4P20040_001	Banana	cytosol	69.89	13.38
GSMUA_Achr7P05530_001	Banana	nucleus	67.61	12.92
GSMUA_Achr3P01090_001	Banana	nucleus	67.05	12.85
VIT_02s0012g00740.t01	Wine grape	cytosol	10.23	2.94
VIT_15s0046g00470.t01	Wine grape	cytosol	9.66	2.77
VIT_03s0038g00970.t01	Wine grape	cytosol	12.5	2.63
VIT_04s0008g07010.t01	Wine grape	cytosol	9.66	2.62
VIT_01s0011g05800.t01	Wine grape	cytosol	9.09	2.61
VIT_15s0021g00480.t01	Wine grape	cytosol	9.09	2.58
VIT_02s0025g01570.t01	Wine grape	cytosol, extracellular	8.52	2.46
VIT_12s0055g00490.t01	Wine grape	cytosol	7.95	1.81
VIT_19s0015g02240.t01	Wine grape	golgi, mitochondrion, plasma membrane	2.27	1.51
VIT_19s0014g02500.t01	Wine grape	plastid	5.68	1.19
Solyc01g103130.1.1	Tomato	nucleus, unclear	0.57	0.16
VIT_00s0267g00020.t01	Wine grape	cytosol	0.0	0.0
VIT_15s0107g00170.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.20.120.1240	MapMan:35.1	ProteinID:CBI38000	ProteinID:CBI38000.3	UniProt:D7U5I1	InterPro:Dynamin_SF
EMBL:FN596508	InterPro:GED	InterPro:GED_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:IPR001849	InterPro:IPR020850
PFAM:PF02212	InterPro:PH_domain	PFscan:PS50003	PFscan:PS51388	PANTHER:PTHR11566	PANTHER:PTHR11566:SF57
UniParc:UPI0001BE4D1B	ArrayExpress:VIT_03s0038g00540	EnsemblPlantsGene:VIT_03s0038g00540	EnsemblPlants:VIT_03s0038g00540.t01	SEG:seg	:

Description

No Description!

Coordinates

chr3:+:503106..504318

Molecular Weight (calculated)

19880.1 Da

IEP (calculated)

8.690

GRAVY (calculated)

-0.405

Length

176 amino acids

Sequence
(BLAST)

001: MTWQVHIECN IKEIADEDEP PPKSSKNKKE NGPEKSPSLV FKITRKVPYK TVLKVHSAVM LKAESIADKA EWLNKLRNVI QPSGQVKGES GLTMRQSLSD
101: GSLDTMARRT TDPEEELRWM SQEVRGYVEA VLNSLAANVP KAVVLCQVEK SKEDMLNQLY SSVMLVLFAI WKHTIL

Best Arabidopsis Sequence Match ( AT1G10290.1 )
(BLAST)

001: MEAIDELSQL SDSMKQAASL LADEDPDETS SSKRPATFLN VVALGNVGAG KSAVLNSLIG HPVLPTGENG ATRAPIIIEL SRESSLSSKA IILQIDNKSQ
101: QVSASALRHS LQDRLSKGAS GKNRDEINLK LRTSTAPPLK LVDLPGLDQR IVDESMIAEY AQHNDAILLV IVPASQASEI SSSRALKIAK EYDPESTRTI
201: GIIGKIDQAA ENSKALAAVQ ALLSNQGPPK TTDIPWVAVI GQSVSIASAQ SGSGENSLET AWRAESESLK SILTGAPQSK LGRIALVDTL ASQIRSRMKL
301: RLPSVLSGLQ GKSQIVQDEL ARLGEQLVNS AEGTRAIALE LCREFEDKFL LHLAGGEGSG WKVVASFEGN FPNRIKQLPL DRHFDLNNVK RVVLEADGYQ
401: PYLISPEKGL RSLIKIVLEL AKDPARLCVD EVHRVLVDIV SASANATPGL GRYPPFKREV VAIASAALDG FKNEAKKMVV ALVDMERAFV PPQHFIRLVQ
501: RRMERQRREE ELKGRSSKKG QDAEQSLLSR ATSPQPDGPT AGGSLKSMKD KPSPQDKETP EVSGLKTAGP EGEITAGYLM KKSAKTNGWS RRWFVLNEKT
601: GKLGYTKKQE ERNFRGTITL EECTIEEIPE DEVEKSKSSK DKKANGPDSK GPGLVFKITC KVPYKTVLKA HNALVLKAES VVDKNEWINK LQKVIQARGG
701: QVGSVSMRQS LSEGSLDKMV RKPIDPEEEL RWMSQEVRGY VEAVLNSLAA NVPKAVVLCQ VEKAKEDMLN QLYSSISAIG NERIESLIQE DQNVKRRRER
801: YQKQSSLLSK LTRQLSIHDN RAAAASSYSD NSGTESSPRA SGGSSGDDWM NAFNSAANGP SDSLSKYGSG GHSRRYSDPA QNGDAASPGS GSNRRTTPNR
901: LPPAPPPTGS AYRY

Arabidopsis Description

DRP2ADRP2A [Source:UniProtKB/TrEMBL;Acc:A0A178WBB3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.