Factsheet for VIT_19s0014g02500.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1
nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH26094	Soybean	plastid	77.8	81.09
KRH55251	Soybean	plastid	76.37	80.5
AT1G53140.1	Thale cress	plastid	75.89	77.85
PGSC0003DMT400032399	Potato	plastid	76.61	77.82
CDY25877	Canola	plastid	76.01	77.4
HORVU2Hr1G095510.1	Barley	cytosol	8.11	77.27
Solyc07g063080.2.1	Tomato	plastid	76.25	77.08
Bra038100.1-P	Field mustard	cytosol	74.22	75.85
GSMUA_Achr2P09480_001	Banana	plastid	71.84	73.59
HORVU2Hr1G095500.1	Barley	cytosol	10.26	72.88
CDY29720	Canola	cytosol, extracellular	36.99	72.43
TraesCS3D01G272800.1	Wheat	plastid	70.53	72.34
TraesCS3A01G273500.1	Wheat	plastid	70.41	72.22
TraesCS3B01G307100.1	Wheat	plastid	70.05	71.85
Os01t0748000-00	Rice	plastid	70.41	71.78
EES03602	Sorghum	plastid	68.85	69.94
Zm00001d043451_P001	Maize	plastid	67.9	69.14
HORVU3Hr1G071340.9	Barley	cytosol, plastid	70.29	68.65
CDY50514	Canola	plastid	59.9	65.54
Zm00001d012752_P006	Maize	plastid	65.39	65.32
Bra037604.1-P	Field mustard	plastid	58.35	63.51
CDY29721	Canola	cytosol	11.58	62.58
HORVU1Hr1G001520.1	Barley	cytosol	6.21	57.78
VIT_02s0012g00740.t01	Wine grape	cytosol	15.87	21.7
VIT_02s0025g01570.t01	Wine grape	cytosol, extracellular	15.63	21.51
VIT_01s0011g05800.t01	Wine grape	cytosol	15.51	21.21
VIT_15s0046g00470.t01	Wine grape	cytosol	15.27	20.85
VIT_15s0107g00170.t01	Wine grape	cytosol	5.73	20.43
VIT_15s0021g00480.t01	Wine grape	cytosol	14.92	20.19
VIT_19s0015g02240.t01	Wine grape	golgi, mitochondrion, plasma membrane	5.49	17.36
VIT_00s0267g00020.t01	Wine grape	cytosol	3.22	17.2
VIT_12s0055g00490.t01	Wine grape	cytosol	15.63	16.95
VIT_04s0008g07010.t01	Wine grape	cytosol	11.69	15.12
VIT_03s0038g00970.t01	Wine grape	cytosol	14.92	14.97
VIT_18s0089g00350.t01	Wine grape	cytosol	12.89	11.6
VIT_12s0035g01740.t01	Wine grape	cytosol	12.65	11.52
VIT_03s0110g00120.t01	Wine grape	cytosol	1.79	6.07
VIT_03s0038g00540.t01	Wine grape	cytosol	1.19	5.68
VIT_02s0087g00010.t01	Wine grape	cytosol	1.07	4.84

Protein Annotations

EntrezGene:100252153	wikigene:100252153	Gene3D:3.40.50.300	MapMan:35.1	ProteinID:CCB46331	ProteinID:CCB46331.1
ncoils:Coil	InterPro:Dynamin_GTPase	InterPro:Dynamin_SF	UniProt:F6H235	EMBL:FN595229	GO:GO:0000166
GO:GO:0000266	GO:GO:0000911	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005515	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0007049	GO:GO:0008017	GO:GO:0008150	GO:GO:0009504	GO:GO:0009987	GO:GO:0016043
GO:GO:0016787	InterPro:G_DYNAMIN_dom	InterPro:IPR030381	EntrezGene:LOC100252153	wikigene:LOC100252153	InterPro:P-loop_NTPase
PFAM:PF00350	PRINTS:PR00195	PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF44	SMART:SM00053
SUPFAM:SSF52540	UniParc:UPI0002109D52	ArrayExpress:VIT_19s0014g02500	EnsemblPlantsGene:VIT_19s0014g02500	EnsemblPlants:VIT_19s0014g02500.t01	RefSeq:XP_002282528
RefSeq:XP_002282528.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr19:-:2599266..2605072

Molecular Weight (calculated)

92911.4 Da

IEP (calculated)

7.534

GRAVY (calculated)

-0.367

Length

838 amino acids

Sequence
(BLAST)

001: MATTTTSNAF LTTPTKTPSE KSKKSHHHFP NSDSKSRFEA YNRLQSAAVA FGEKLPIPEI VALGGQSDGK SSLLEALLGF RFNVREVEMG TRRPLILQMV
101: HDSTALEPRC RFQQVLFLSI VLTSLRFKDS EEDSEEYGSP VVLASAIADI IKSRTEAYLK KTKTAVSSKP IVMRAEYAHC PNLTIIDTPG FVLKAKKGEP
201: ENTPDEILSM VKSLASPPHR ILLFLQQSSV EWCSSLWLDA VREIDPTYRR TVIVVSKFDN RLKEFTDRWE VDRYLSASGY LGDGTHPFFV ALPKDRNTVS
301: NDEFRRQISQ VDSDVLRHLR DGIKGGFDEE KFRPFIGFGC LREYLESELQ KRYKEAAPAT LALLEQRCCE VTTELARLDS KIQATSDVAH LRRCAMLHTA
401: SISNHVGVLI DGAADPAPEQ WGKTTEEEQS ESGIGSWPGI TAVIKPPNST LRLYGGAAFE RVIHEFRCAA YSIECPPVSR EKVANILLAH AGRGGGRGVM
501: EAAAEIARAA ARSWLAPLLD TACDRLAFVL GNLFDLAVER SCSRDSDYGR KSGNMDGYVG FHAALRHSYN RFIKDLAKQC KQLVRHHLDS ATSPYSQVCY
601: ENFQGGSGSG VTSMYRFSQP LVGSFSLELS EGGPALRHDK VRDQENIPPE KDAQETTPGK GVETREALRE SQLTVPETPS PDQPCDMVYG GVKKEVGNEH
701: GARKRQARMI GHSRNSDNLR LTNAGSFLFG NADSGLRSGS AYSDICSSAA QHFARIREVL VERSVMSTLN SGFLTPCRDR LMMALGLDLF AVNDEKFMDM
801: FVAPGAIDIL QNERQSLEKR QKILQSCLNE FKSVARAL

Best Arabidopsis Sequence Match ( AT1G53140.1 )
(BLAST)

001: MANSNTYLTT PTKTPSSRRN QQSQSKMQSH SKDPINAESR SRFEAYNRLQ AAAVAFGEKL PIPEIVAIGG QSDGKSSLLE ALLGFRFNVR EVEMGTRRPL
101: ILQMVHDLSA LEPRCRFQDE DSEEYGSPIV SATAVADVIR SRTEALLKKT KTAVSPKPIV MRAEYAHCPN LTIIDTPGFV LKAKKGEPET TPDEILSMVK
201: SLASPPHRIL LFLQQSSVEW CSSLWLDAVR EIDSSFRRTI VVVSKFDNRL KEFSDRGEVD RYLSASGYLG ENTRPYFVAL PKDRSTISND EFRRQISQVD
301: TEVIRHLREG VKGGFDEEKF RSCIGFGSLR DFLESELQKR YKEAAPATLA LLEERCSEVT DDMLRMDMKI QATSDVAHLR KAAMLYTASI SNHVGALIDG
401: AANPAPEQWG KTTEEERGES GIGSWPGVSV DIKPPNAVLK LYGGAAFERV IHEFRCAAYS IECPPVSREK VANILLAHAG RGGGRGVTEA SAEIARTAAR
501: SWLAPLLDTA CDRLAFVLGS LFEIALERNL NQNSEYEKKT ENMDGYVGFH AAVRNCYSRF VKNLAKQCKQ LVRHHLDSVT SPYSMACYEN NYHQGGAFGA
601: YNKFNQASPN SFCFELSDTS RDEPMKDQEN IPPEKNNGQE TTPGKGGESH ITVPETPSPD QPCEIVYGLV KKEIGNGPDG VGARKRMARM VGNRNIEPFR
701: VQNGGLMFAN ADNGMKSSSA YSEICSSAAQ HFARIREVLV ERSVTSTLNS GFLTPCRDRL VVALGLDLFA VNDDKFMDMF VAPGAIVVLQ NERQQLQKRQ
801: KILQSCLTEF KTVARSL

Arabidopsis Description

DRP5ADRP5A [Source:UniProtKB/TrEMBL;Acc:A0A178WBH9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.