Factsheet for Solyc07g063080.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 3
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400032399	Potato	plastid	97.23	97.7
KRH55251	Soybean	plastid	73.22	76.35
VIT_19s0014g02500.t01	Wine grape	plastid	77.08	76.25
KRH26094	Soybean	plastid	73.94	76.24
HORVU2Hr1G095510.1	Barley	cytosol	7.96	75.0
AT1G53140.1	Thale cress	plastid	73.46	74.54
CDY25877	Canola	plastid	73.7	74.24
Bra038100.1-P	Field mustard	cytosol	72.14	72.93
GSMUA_Achr2P09480_001	Banana	plastid	70.69	71.64
HORVU2Hr1G095500.1	Barley	cytosol	9.89	69.49
TraesCS3A01G273500.1	Wheat	plastid	68.4	69.4
CDY29720	Canola	cytosol, extracellular	35.71	69.16
TraesCS3D01G272800.1	Wheat	plastid	68.03	69.03
TraesCS3B01G307100.1	Wheat	plastid	67.91	68.91
Os01t0748000-00	Rice	plastid	67.91	68.49
EES03602	Sorghum	plastid	67.31	67.64
Zm00001d043451_P001	Maize	plastid	66.34	66.83
HORVU3Hr1G071340.9	Barley	cytosol, plastid	68.4	66.08
Zm00001d012752_P006	Maize	plastid	63.93	63.17
CDY29721	Canola	cytosol	11.7	62.58
CDY50514	Canola	plastid	57.54	62.27
Bra037604.1-P	Field mustard	plastid	56.82	61.17
HORVU1Hr1G001520.1	Barley	cytosol	5.91	54.44
Solyc11g043170.1.1	Tomato	cytosol	4.58	23.31
Solyc05g050600.2.1	Tomato	nucleus, plastid	15.2	20.69
Solyc01g095970.2.1	Tomato	plastid	14.72	20.0
Solyc01g005310.2.1	Tomato	plastid	14.72	19.61
Solyc08g077360.2.1	Tomato	plastid	14.23	19.34
Solyc10g062160.1.1	Tomato	plastid	13.39	18.97
Solyc11g043200.1.1	Tomato	cytosol, nucleus	4.83	17.47
Solyc01g088510.2.1	Tomato	nucleus	10.74	17.38
Solyc04g072030.1.1	Tomato	cytosol	13.75	16.89
Solyc08g006600.2.1	Tomato	plastid	15.08	16.56
Solyc10g047050.1.1	Tomato	nucleus	14.6	15.69
Solyc01g106050.2.1	Tomato	plastid	15.44	15.57
Solyc01g103130.1.1	Tomato	nucleus, unclear	10.49	14.33
Solyc11g069980.1.1	Tomato	cytosol	12.42	12.89
Solyc11g039650.1.1	Tomato	cytosol, nucleus, plastid	13.03	11.75
Solyc11g043210.1.1	Tomato	nucleus	7.72	11.62
Solyc11g070010.1.1	Tomato	cytosol	4.1	8.65
Solyc01g103120.2.1	Tomato	cytosol	2.05	5.76

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	ncoils:Coil	InterPro:Dynamin_GTPase	InterPro:Dynamin_SF	GO:GO:0000166
GO:GO:0000266	GO:GO:0000911	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005515	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0007049	GO:GO:0008017	GO:GO:0008150	GO:GO:0009504	GO:GO:0009987	GO:GO:0016043
GO:GO:0016787	InterPro:G_DYNAMIN_dom	InterPro:IPR030381	UniProt:K4CGZ1	InterPro:P-loop_NTPase	PFAM:PF00350
PRINTS:PR00195	PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF44	SMART:SM00053	SUPFAM:SSF52540
EnsemblPlantsGene:Solyc07g063080.2	EnsemblPlants:Solyc07g063080.2.1	UniParc:UPI000276BC31	SEG:seg	:	:

Description

Dynamin-related protein 5A [Source:Projected from Arabidopsis thaliana (AT1G53140) UniProtKB/Swiss-Prot;Acc:F4HPR5]

Coordinates

chr7:-:65657675..65662332

Molecular Weight (calculated)

92137.1 Da

IEP (calculated)

7.025

GRAVY (calculated)

-0.446

Length

829 amino acids

Sequence
(BLAST)

001: MASTNSFLNT PTKTPTSTSI SKKHHHKHHT ADSNRSASEF KDRFEAYNRL QAAAVAFGEK LPIPEIVAIG GQSDGKSSLL EALLGFRFNV REVEMGTRRP
101: LILQMVHDQS ALDPRCRFQD EDSEEYGSPL VLASEIADTI KSRTESLLKR TRAAVSSKPI VMRAEYAHCP NLTIIDTPGF VLKAKKGEPE RTPDEILSMV
201: KSLASPPHRI ILFLQQSSVE WCSSLWLDTI REIDPSFRRT VIVVSKFDNR LKEFTERWEV DRYLSASGYL GENTHPFFVA LPKDRGTISN DEFRRQISQV
301: DAEMLHYLRD SVKGGFDEEK YRSYVGFGCL RDFLEAELQR RYKEAAPATL ALLEQRCGEV TADLARMECK INATSDVAHL RKSAMLHAAA LCNHVEALID
401: GAADPAPEQW GKTTEEERIE SGIGSWPSVT AEIKPPNATL RLYGGAAFER VMHEFRCATY SIKCPPVSRE KVANILLAHT GRGGGRGITE AAAEIARAAA
501: RSWLAPLLDT ACDRLAFVLG NLFDISIEKN HGNDSNSKNS DGHRPVDMEG YIGFHAALRQ SYNNFMKDLS KECKQLLRHH LDSVTSPYSH VCYENNFIGS
601: FSSGNNSIYQ LNQATASPLC LELSDGGAAL RKEAMKDQEN MPPEKSAQET TPGKVTESRD ALRECQMTVP ETPSPDQPSD GNYGIKRELG NCVEVGARKR
701: QPRISGNARN HGQNGESLLF GNGDNISRPV STYAEICSSA AQHFARIREV LVERSVASTL NSGFLTPCRE RLFVALGLNL FAVNDEKFMD MFVAPGAIDS
801: LENERQSLQK RQKILHSCLN EFKSVARAL

Best Arabidopsis Sequence Match ( AT1G53140.1 )
(BLAST)

001: MANSNTYLTT PTKTPSSRRN QQSQSKMQSH SKDPINAESR SRFEAYNRLQ AAAVAFGEKL PIPEIVAIGG QSDGKSSLLE ALLGFRFNVR EVEMGTRRPL
101: ILQMVHDLSA LEPRCRFQDE DSEEYGSPIV SATAVADVIR SRTEALLKKT KTAVSPKPIV MRAEYAHCPN LTIIDTPGFV LKAKKGEPET TPDEILSMVK
201: SLASPPHRIL LFLQQSSVEW CSSLWLDAVR EIDSSFRRTI VVVSKFDNRL KEFSDRGEVD RYLSASGYLG ENTRPYFVAL PKDRSTISND EFRRQISQVD
301: TEVIRHLREG VKGGFDEEKF RSCIGFGSLR DFLESELQKR YKEAAPATLA LLEERCSEVT DDMLRMDMKI QATSDVAHLR KAAMLYTASI SNHVGALIDG
401: AANPAPEQWG KTTEEERGES GIGSWPGVSV DIKPPNAVLK LYGGAAFERV IHEFRCAAYS IECPPVSREK VANILLAHAG RGGGRGVTEA SAEIARTAAR
501: SWLAPLLDTA CDRLAFVLGS LFEIALERNL NQNSEYEKKT ENMDGYVGFH AAVRNCYSRF VKNLAKQCKQ LVRHHLDSVT SPYSMACYEN NYHQGGAFGA
601: YNKFNQASPN SFCFELSDTS RDEPMKDQEN IPPEKNNGQE TTPGKGGESH ITVPETPSPD QPCEIVYGLV KKEIGNGPDG VGARKRMARM VGNRNIEPFR
701: VQNGGLMFAN ADNGMKSSSA YSEICSSAAQ HFARIREVLV ERSVTSTLNS GFLTPCRDRL VVALGLDLFA VNDDKFMDMF VAPGAIVVLQ NERQQLQKRQ
801: KILQSCLTEF KTVARSL

Arabidopsis Description

DRP5ADRP5A [Source:UniProtKB/TrEMBL;Acc:A0A178WBH9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.