Factsheet for PGSC0003DMT400032399

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 3
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g063080.2.1	Tomato	plastid	97.7	97.23
KRH55251	Soybean	plastid	73.94	76.73
KRH26094	Soybean	plastid	74.67	76.62
VIT_19s0014g02500.t01	Wine grape	plastid	77.82	76.61
HORVU2Hr1G095510.1	Barley	cytosol	8.0	75.0
AT1G53140.1	Thale cress	plastid	74.06	74.79
CDY25877	Canola	plastid	74.3	74.48
Bra038100.1-P	Field mustard	cytosol	72.73	73.17
GSMUA_Achr2P09480_001	Banana	plastid	71.39	72.0
HORVU2Hr1G095500.1	Barley	cytosol	10.06	70.34
TraesCS3A01G273500.1	Wheat	plastid	68.85	69.52
CDY29720	Canola	cytosol, extracellular	35.88	69.16
TraesCS3D01G272800.1	Wheat	plastid	68.48	69.16
TraesCS3B01G307100.1	Wheat	plastid	68.36	69.03
Os01t0748000-00	Rice	plastid	68.61	68.86
EES03602	Sorghum	plastid	68.36	68.36
Zm00001d043451_P001	Maize	plastid	67.39	67.56
HORVU3Hr1G071340.9	Barley	cytosol, plastid	68.97	66.32
Zm00001d012752_P006	Maize	plastid	64.73	63.65
CDY29721	Canola	cytosol	11.76	62.58
CDY50514	Canola	plastid	57.94	62.4
Bra037604.1-P	Field mustard	plastid	57.09	61.17
HORVU1Hr1G001520.1	Barley	cytosol	5.82	53.33
PGSC0003DMT400065607	Potato	cytosol	5.09	20.49
PGSC0003DMT400000646	Potato	cytosol	15.03	20.33
PGSC0003DMT400004319	Potato	cytosol	14.42	19.38
PGSC0003DMT400004655	Potato	cytosol	14.3	19.34
PGSC0003DMT400051417	Potato	cytosol	12.73	18.99
PGSC0003DMT400028286	Potato	cytosol	14.06	18.95
PGSC0003DMT400088564	Potato	cytosol	2.55	17.07
PGSC0003DMT400064542	Potato	cytosol	13.58	16.59
PGSC0003DMT400014025	Potato	cytosol	14.79	15.82
PGSC0003DMT400095128	Potato	cytosol	8.24	15.49
PGSC0003DMT400072601	Potato	cytosol	11.39	15.19
PGSC0003DMT400050652	Potato	cytosol	11.15	14.96
PGSC0003DMT400064541	Potato	cytosol	11.03	14.87
PGSC0003DMT400004228	Potato	cytosol	4.36	12.72
PGSC0003DMT400064491	Potato	cytosol	5.33	11.11
PGSC0003DMT400094747	Potato	cytosol	3.88	7.75

Protein Annotations

EntrezGene:102591789	Gene3D:3.40.50.300	MapMan:35.1	ncoils:Coil	InterPro:Dynamin_GTPase	InterPro:Dynamin_SF
GO:GO:0000166	GO:GO:0000911	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0007049
GO:GO:0008150	GO:GO:0009504	GO:GO:0009987	GO:GO:0016787	InterPro:G_DYNAMIN_dom	InterPro:IPR030381
UniProt:M1AXD3	InterPro:P-loop_NTPase	PFAM:PF00350	EnsemblPlantsGene:PGSC0003DMG400012444	PGSC:PGSC0003DMG400012444	EnsemblPlants:PGSC0003DMT400032399
PRINTS:PR00195	PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF44	SMART:SM00053	SUPFAM:SSF52540
UniParc:UPI000296513E	RefSeq:XP_006348258.1	SEG:seg	:	:	:

Description

ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400012444]

Coordinates

chr7:-:53141508..53146564

Molecular Weight (calculated)

91742.8 Da

IEP (calculated)

7.115

GRAVY (calculated)

-0.426

Length

825 amino acids

Sequence
(BLAST)

001: MATTNSFLNT PTKTPTSTSI SKKHHHKQHT ADPNRSASEF KDRFEAYNRL QAAAVAFGEK LPIPEIVAIG GQSDGKSSLL EALLGFRFNV REVEMGTRRP
101: LILQMVHDQS ALEPRCRFQE EDSEEYGSPV VLASAIADTI KSRTESLLKR TRAAVSSKPI VMRAEYAHCP NLTIIDTPGF VLKAKKGEPE RTPDEILSMV
201: KSLASPPHRI ILFLQQSSVE WCSSLWLDTI REIDPTFRRT VIVVSKFDNR LKEFTERWEV DRYLSASGYL GENTRPFFVA LPKDRGTISN DEFRRQISQV
301: DAEMLHYLRD SVKGGFDEEK YRSYVGFGCL RDFLEAELQR RYKEAAPATL ALLEQRCGEV TADLARMECK INATSDVAHL RKSAMLHAAA LCNHVEALID
401: GAADPAPEQW GKTTEEERLE SGIGSWPSVT AEIKPPNASL RLYGGAAFER VMHEFRCATY SIKCPPVSRE KVANILLAHT GRGGGRGITE AAAEIARAAA
501: RSWLAPLLDT ACDRLAFVLG NLFDISIEKN HGNDSNNGHR PVDMEGYIGF HAALRQSYNH FMKDLSKECK QLLRHHLDSV TSPYSHVCYE NNFIGSFSSG
601: TNSMYQLNQA TASPLCLELS DGGAALHKEA MKDQENIPPE KSAQETTPGK VTESRDVLRE CQMTVPETPS PDQPSDGNYG IKRELGNCVE VGARKRQPRI
701: TGNARNHGQN GESLLFGNGD NISRPVSTYA EICSSAAQHF ARIREVLVER SVASTLNSGF LTPCRERLFV ALGLNLFAVN DEKFMDMFVA PGAIDSLENE
801: RQSLQKRQKI LHSCLNEFKS VARAL

Best Arabidopsis Sequence Match ( AT1G53140.1 )
(BLAST)

001: MANSNTYLTT PTKTPSSRRN QQSQSKMQSH SKDPINAESR SRFEAYNRLQ AAAVAFGEKL PIPEIVAIGG QSDGKSSLLE ALLGFRFNVR EVEMGTRRPL
101: ILQMVHDLSA LEPRCRFQDE DSEEYGSPIV SATAVADVIR SRTEALLKKT KTAVSPKPIV MRAEYAHCPN LTIIDTPGFV LKAKKGEPET TPDEILSMVK
201: SLASPPHRIL LFLQQSSVEW CSSLWLDAVR EIDSSFRRTI VVVSKFDNRL KEFSDRGEVD RYLSASGYLG ENTRPYFVAL PKDRSTISND EFRRQISQVD
301: TEVIRHLREG VKGGFDEEKF RSCIGFGSLR DFLESELQKR YKEAAPATLA LLEERCSEVT DDMLRMDMKI QATSDVAHLR KAAMLYTASI SNHVGALIDG
401: AANPAPEQWG KTTEEERGES GIGSWPGVSV DIKPPNAVLK LYGGAAFERV IHEFRCAAYS IECPPVSREK VANILLAHAG RGGGRGVTEA SAEIARTAAR
501: SWLAPLLDTA CDRLAFVLGS LFEIALERNL NQNSEYEKKT ENMDGYVGFH AAVRNCYSRF VKNLAKQCKQ LVRHHLDSVT SPYSMACYEN NYHQGGAFGA
601: YNKFNQASPN SFCFELSDTS RDEPMKDQEN IPPEKNNGQE TTPGKGGESH ITVPETPSPD QPCEIVYGLV KKEIGNGPDG VGARKRMARM VGNRNIEPFR
701: VQNGGLMFAN ADNGMKSSSA YSEICSSAAQ HFARIREVLV ERSVTSTLNS GFLTPCRDRL VVALGLDLFA VNDDKFMDMF VAPGAIVVLQ NERQQLQKRQ
801: KILQSCLTEF KTVARSL

Arabidopsis Description

DRP5ADRP5A [Source:UniProtKB/TrEMBL;Acc:A0A178WBH9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.