Factsheet for Bra037604.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 3
endoplasmic reticulum 1
mitochondrion 1
nucleus 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29720	Canola	cytosol, extracellular	51.69	92.99
CDY50514	Canola	plastid	85.84	86.29
Bra038100.1-P	Field mustard	cytosol	83.12	78.05
HORVU2Hr1G095510.1	Barley	cytosol	8.31	72.73
AT1G53140.1	Thale cress	plastid	76.75	72.34
HORVU2Hr1G095500.1	Barley	cytosol	10.39	67.8
VIT_19s0014g02500.t01	Wine grape	plastid	63.51	58.35
KRH26094	Soybean	plastid	60.39	57.84
KRH55251	Soybean	plastid	59.48	57.61
PGSC0003DMT400032399	Potato	plastid	61.17	57.09
Solyc07g063080.2.1	Tomato	plastid	61.17	56.82
HORVU1Hr1G001520.1	Barley	cytosol	6.23	53.33
TraesCS3A01G273500.1	Wheat	plastid	54.55	51.41
TraesCS3B01G307100.1	Wheat	plastid	54.55	51.41
GSMUA_Achr2P09480_001	Banana	plastid	54.42	51.22
TraesCS3D01G272800.1	Wheat	plastid	54.29	51.16
Os01t0748000-00	Rice	plastid	54.29	50.85
EES03602	Sorghum	plastid	52.99	49.45
Zm00001d043451_P001	Maize	plastid	52.86	49.45
HORVU3Hr1G071340.9	Barley	cytosol, plastid	54.29	48.72
Zm00001d012752_P006	Maize	plastid	49.74	45.65
CDY29721	Canola	cytosol	5.71	28.39
Bra003469.1-P	Field mustard	cytosol	12.34	16.52
Bra028525.1-P	Field mustard	cytosol	12.73	16.07
Bra025448.1-P	Field mustard	cytosol	11.95	15.78
Bra014507.1-P	Field mustard	cytosol	11.95	14.7
Bra037643.1-P	Field mustard	cytosol	11.69	14.56
Bra007513.1-P	Field mustard	cytosol	11.82	14.56
Bra026801.1-P	Field mustard	cytosol	11.43	14.33
Bra010250.1-P	Field mustard	cytosol	7.27	14.18
Bra016679.1-P	Field mustard	cytosol	11.3	14.17
Bra027151.1-P	Field mustard	cytosol	10.52	12.0
Bra031505.1-P	Field mustard	cytosol	8.83	11.89
Bra031502.1-P	Field mustard	cytosol	9.87	11.62
Bra011458.1-P	Field mustard	cytosol	11.43	10.9
Bra036991.1-P	Field mustard	cytosol	11.43	10.9
Bra038229.1-P	Field mustard	cytosol	10.91	10.69
Bra034579.1-P	Field mustard	cytosol	10.78	10.29
Bra018449.1-P	Field mustard	cytosol	10.91	9.2
Bra031707.1-P	Field mustard	cytosol	10.91	9.18
Bra017901.1-P	Field mustard	cytosol	11.17	9.1
Bra019950.1-P	Field mustard	cytosol	10.91	8.95
Bra035433.1-P	Field mustard	cytosol	11.3	8.69
Bra031511.1-P	Field mustard	cytosol	6.62	8.25

Protein Annotations

EnsemblPlants:Bra037604.1	EnsemblPlants:Bra037604.1-P	EnsemblPlantsGene:Bra037604	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:Dynamin_SF	ncoils:Coil	PANTHER:PTHR11566	PANTHER:PTHR11566:SF44	SEG:seg	TMHMM:TMhelix
UniParc:UPI00025437B6	UniProt:M4F941	MapMan:35.1	:	:	:

Description

AT1G53140 (E=7e-131) | dynamin family protein

Coordinates

chrA01:-:13168908..13171847

Molecular Weight (calculated)

84128.2 Da

IEP (calculated)

7.122

GRAVY (calculated)

-0.336

Length

770 amino acids

Sequence
(BLAST)

001: MANSNSSLPT PTKTPSSRRN NQSQSKIQSH PQDPATSESR SRFEAYNRLQ AAAVAFGEKL PTPEIVAIGG QSDGKSSPRV PIQRPRGRNG DAPSSDSPDG
101: AFEEDEDCGE YAHSPNLTII DTPGFVLKVA LSLGQRKETT PDEILSMVKS LASPPHRILL WSGALLCGLM LFVKLIQAFG GQLLLSPSLI IASRSLMIVV
201: KLIVTSVLVG TLGRTLVLTL WPCLKTGALS QTMSFVDMDV IRHLREGVNG GFDEEKFRSH IGFGSLRDFL ESELQKRYKD AAPATLALLE QRCSEVTDDM
301: LRMDMKIQAT SDVAHLRKGA LIDGAANPAP EQWGKTTEEE RGESGIGTWP GVWLDIKPPN AVLRLYGGAA CERVIHEFRC AAYSIECPPV SREKVANILL
401: AHAGRGGGRG VTEASAEIAR TAARSWLAPL LDTACDRLAF VLGSLFEIAL ERNLNQNSEC KNTILDFIKS HRSPVSHEVS LIADEKKAEN MDGYVGFHAA
501: LRNCYSRFVK NLAKQCKQLV RHHLDSVTSP YSMACYESDY HQGGAFGSYY KPNQASGIGS FCFELSDTGR DEPMKDQENI PPEKSKAQET TPGKGEETHI
601: TVPETPSPDQ PCEIGYGLVK KEIGNGHHHD GGGARKRVAR MGGNRNIQPL RIQNGEGGLL FGTTENGMNS SSAYTEICSS AAQHFARIRE VLVERSVTST
701: LNSGFLTPCR DRLVVALGVD LFAVNDEKFM DMFVAPGAID VLQNERQQLQ KRQKILQSCL TEFKTVSRSL

Best Arabidopsis Sequence Match ( AT1G53140.1 )
(BLAST)

001: MANSNTYLTT PTKTPSSRRN QQSQSKMQSH SKDPINAESR SRFEAYNRLQ AAAVAFGEKL PIPEIVAIGG QSDGKSSLLE ALLGFRFNVR EVEMGTRRPL
101: ILQMVHDLSA LEPRCRFQDE DSEEYGSPIV SATAVADVIR SRTEALLKKT KTAVSPKPIV MRAEYAHCPN LTIIDTPGFV LKAKKGEPET TPDEILSMVK
201: SLASPPHRIL LFLQQSSVEW CSSLWLDAVR EIDSSFRRTI VVVSKFDNRL KEFSDRGEVD RYLSASGYLG ENTRPYFVAL PKDRSTISND EFRRQISQVD
301: TEVIRHLREG VKGGFDEEKF RSCIGFGSLR DFLESELQKR YKEAAPATLA LLEERCSEVT DDMLRMDMKI QATSDVAHLR KAAMLYTASI SNHVGALIDG
401: AANPAPEQWG KTTEEERGES GIGSWPGVSV DIKPPNAVLK LYGGAAFERV IHEFRCAAYS IECPPVSREK VANILLAHAG RGGGRGVTEA SAEIARTAAR
501: SWLAPLLDTA CDRLAFVLGS LFEIALERNL NQNSEYEKKT ENMDGYVGFH AAVRNCYSRF VKNLAKQCKQ LVRHHLDSVT SPYSMACYEN NYHQGGAFGA
601: YNKFNQASPN SFCFELSDTS RDEPMKDQEN IPPEKNNGQE TTPGKGGESH ITVPETPSPD QPCEIVYGLV KKEIGNGPDG VGARKRMARM VGNRNIEPFR
701: VQNGGLMFAN ADNGMKSSSA YSEICSSAAQ HFARIREVLV ERSVTSTLNS GFLTPCRDRL VVALGLDLFA VNDDKFMDMF VAPGAIVVLQ NERQQLQKRQ
801: KILQSCLTEF KTVARSL

Arabidopsis Description

DRP5ADRP5A [Source:UniProtKB/TrEMBL;Acc:A0A178WBH9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.