Factsheet for Bra031505.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34117	Canola	cytosol	68.71	74.43
CDY03289	Canola	cytosol	68.71	74.43
Bra027151.1-P	Field mustard	cytosol	78.15	66.22
Bra031502.1-P	Field mustard	cytosol	75.7	66.21
PGSC0003DMT400088564	Potato	cytosol	13.11	60.98
KRH11082	Soybean	cytosol	13.64	53.42
Solyc04g072030.1.1	Tomato	cytosol	56.99	48.3
Bra010250.1-P	Field mustard	cytosol	33.04	47.85
PGSC0003DMT400064542	Potato	cytosol	56.12	47.56
Os03t0260000-01	Rice	cytosol	55.42	46.76
KXG39737	Sorghum	cytosol	53.15	46.48
GSMUA_Achr8P19650_001	Banana	cytosol, mitochondrion	44.93	46.14
PGSC0003DMT400050652	Potato	cytosol	49.48	46.02
TraesCS4B01G217700.1	Wheat	cytosol	51.22	45.92
TraesCS4D01G217900.1	Wheat	cytosol	52.8	45.55
Zm00001d028495_P001	Maize	cytosol	53.67	45.55
TraesCS4A01G213700.1	Wheat	cytosol	47.03	45.44
EER95148	Sorghum	cytosol	53.32	45.05
TraesCS4A01G086700.1	Wheat	cytosol	52.27	45.03
HORVU4Hr1G061820.3	Barley	plastid	52.97	44.56
PGSC0003DMT400072601	Potato	cytosol	47.9	44.26
PGSC0003DMT400064541	Potato	cytosol	46.85	43.79
PGSC0003DMT400095128	Potato	cytosol	32.87	42.82
Os04t0129900-01	Rice	cytosol	51.05	42.69
TraesCS4D01G098800.1	Wheat	cytosol	50.7	42.4
Zm00001d028497_P001	Maize	cytosol	45.63	41.83
Solyc11g069980.1.1	Tomato	cytosol	54.2	38.8
PGSC0003DMT400064491	Potato	cytosol	22.55	32.58
Bra031511.1-P	Field mustard	cytosol	28.15	26.05
Bra014507.1-P	Field mustard	cytosol	25.87	23.64
Bra007513.1-P	Field mustard	cytosol	25.52	23.36
Bra025448.1-P	Field mustard	cytosol	23.78	23.33
Bra016679.1-P	Field mustard	cytosol	24.48	22.8
Bra026801.1-P	Field mustard	cytosol	24.13	22.48
Bra028525.1-P	Field mustard	cytosol	23.6	22.13
Bra037643.1-P	Field mustard	cytosol	23.78	22.01
Bra003469.1-P	Field mustard	cytosol	21.68	21.57
Bra011458.1-P	Field mustard	cytosol	25.0	17.72
Bra034579.1-P	Field mustard	cytosol	24.83	17.6
Bra036991.1-P	Field mustard	cytosol	24.65	17.47
Bra038229.1-P	Field mustard	cytosol	17.83	12.98
Bra038100.1-P	Field mustard	cytosol	15.56	10.85
Bra031707.1-P	Field mustard	cytosol	15.91	9.95
Bra019950.1-P	Field mustard	cytosol	16.26	9.9
Bra018449.1-P	Field mustard	cytosol	15.73	9.86
Bra017901.1-P	Field mustard	cytosol	15.73	9.52
Bra035433.1-P	Field mustard	cytosol	15.73	8.99
Bra037604.1-P	Field mustard	plastid	11.89	8.83

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	EnsemblPlantsGene:Bra031505	EnsemblPlants:Bra031505.1	EnsemblPlants:Bra031505.1-P	InterPro:Dynamin_GTPase
InterPro:Dynamin_SF	InterPro:Dynamin_central	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:G_DYNAMIN_dom	InterPro:IPR030381	UniProt:M4ERS9
InterPro:P-loop_NTPase	PFAM:PF00350	PFAM:PF01031	PRINTS:PR00195	PFscan:PS51718	PANTHER:PTHR11566
PANTHER:PTHR11566:SF135	SMART:SM00053	SUPFAM:SSF52540	UniParc:UPI0002544C84	SEG:seg	:

Description

AT1G60500 (E=7e-247) | dynamin family protein

Coordinates

chrA01:+:16901304..16903358

Molecular Weight (calculated)

64051.1 Da

IEP (calculated)

7.278

GRAVY (calculated)

-0.192

Length

572 amino acids

Sequence
(BLAST)

001: MKGSKKRVVS KPSSSRTIVK ANPNDNKSVT IEPPIVSSYN DQIRPLLDTV DRLRNLNVMK EGIQLPTIVV VGDQSSGKSS VLESLAGISL PRGQGICTRV
101: PLVMRLQGST SSKPEIWLEY SDKVVQTDEE HIAEAISAAT DVIAGSSKGV SDAPLTLHVK KAGAPDLTMV DLPGIIRVPV KGQPENIHEQ ISGMIMKYIK
201: PQESIILNVL SATVDFTTCE SIRMSRQVDK TGERTLAVVT KADMAPEGLL QKVTADDVSI GLGYVCVRNR VGEETYEEAR DQEELLFKTH PMLSMIDENI
301: VGLPVLAQKL IHIQTTMISR CLPEIVRKIN HKMETADLEL KKLPMVMTST GEALMTLMDI IASAKESLLR ILIQGDFSEF PDNHGMHGTA RLADMLSKFS
401: DDLQAKPKQV REFLMDEIKV LEEYKCVGLP NFIPRSAFMA ILSQHVDDIH AKPVEFIKNL WDYIEVVLSS IITKYSENFP QVQPSIKRAG RNLMSKIKEQ
501: SVDRVIQIVE MEKLTDYTCS PEYMKSWTEK IDAQKSFVDA VLNVIGTIRL TCARRKARED WKRMTWRETL RF

Best Arabidopsis Sequence Match ( AT1G60500.1 )
(BLAST)

001: MVKKKVATKK NSPSLAIAKK KSRSNKDVVS VEAPIISSYN DRIRPLLDTV DRLRNLNVMR EGIHLPTIVV VGDQSSGKSS VLESLAGISL PRGQGICTRV
101: PLVMRLQRSS SPEPEIWLEY NDKVVPTDEE HIAEAIRAAT DVIAGSGKGV SDAPLTLHVK KAGVPDLTMV DLPGITRVPV NGQPENIYEQ ISGMIMEYIE
201: PQESIILNVL SATVDFTTCE SIRMSRKVDK TGQRTLAVVT KADMAPEGLL QKVTADDVSI VLGYVCVRNR IGEETYEEAR MQEELLFRTH PVLSLIDEDI
301: VGIPVLAQKL MLIQSSMIAR CLPKIVSKIN QKLDTAVLEL NKLPMVMAST GEALMALMDI IGSAKESLLR ILVQGDFSEY PDDQNMHCTA RLADMLSQFS
401: DSLQAKPKEV AEFLMDEIKI LDECKCVGLP NFIPRSAFLA ILSQHVDGIQ DKPVEFINKI WDYIEDVLSS VTAKRSDNFP QIQSSIKRAG RNLISKIKEQ
501: SVNRVMEIVE MEKLTDYTCN PEYMTSWTQK TSAQESFIDA VVKNENIPDY FSVTGFGNVK ISHLRKYHAH LLIPAFDMKM RITSYWKIVL RRIVDNLALY
601: LQLSVKSLVN TRFQKEIVAE MVDPRDGGGV EKMLEESPLV ASKREKLQNS IKLLKESKDA VAAIVDQNC

Arabidopsis Description

DRP4CDynamin-related protein 4C [Source:UniProtKB/Swiss-Prot;Acc:Q9ZP55]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.