Factsheet for TraesCS4D01G217900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G061820.3	Barley	plastid	96.53	94.12
Os03t0260000-01	Rice	cytosol	85.07	83.19
TraesCS4B01G217700.1	Wheat	cytosol	79.94	83.07
TraesCS4A01G086700.1	Wheat	cytosol	80.54	80.42
KXG39737	Sorghum	cytosol	78.88	79.97
Zm00001d028497_P001	Maize	cytosol	72.4	76.92
TraesCS4D01G098800.1	Wheat	cytosol	75.72	73.39
AT1G60530.1	Thale cress	cytosol	31.07	68.44
GSMUA_Achr8P19650_001	Banana	cytosol, mitochondrion	50.23	59.78
CDY36456	Canola	cytosol	16.74	59.68
PGSC0003DMT400088564	Potato	cytosol	10.86	58.54
KRH21193	Soybean	cytosol	43.59	58.27
CDY53048	Canola	cytosol	43.29	57.4
CDY47217	Canola	cytosol	44.49	57.39
Solyc04g072030.1.1	Tomato	cytosol	58.37	57.33
PGSC0003DMT400064542	Potato	cytosol	58.22	57.19
CDY47216	Canola	cytosol	45.55	56.13
PGSC0003DMT400072601	Potato	cytosol	52.34	56.06
KRH21190	Soybean	cytosol	55.96	55.79
KRH42928	Soybean	cytosol	50.23	55.59
KRH11082	Soybean	cytosol	12.22	55.48
PGSC0003DMT400050652	Potato	cytosol	51.13	55.12
PGSC0003DMT400064541	Potato	cytosol	49.77	53.92
KRH59040	Soybean	cytosol	54.6	53.63
PGSC0003DMT400095128	Potato	cytosol	35.44	53.53
CDY34120	Canola	cytosol	52.64	53.36
CDY24536	Canola	cytosol	52.49	53.21
CDY53046	Canola	cytosol	54.0	53.12
Bra031502.1-P	Field mustard	cytosol	52.34	53.06
Bra031505.1-P	Field mustard	cytosol	45.55	52.8
Bra027151.1-P	Field mustard	cytosol	53.7	52.74
AT1G60500.1	Thale cress	mitochondrion	52.94	52.47
CDY02039	Canola	cytosol, plastid	43.14	51.16
PGSC0003DMT400065607	Potato	cytosol	15.69	50.73
CDY34117	Canola	cytosol	39.97	50.19
CDY03289	Canola	cytosol	39.97	50.19
PGSC0003DMT400064491	Potato	cytosol	28.51	47.73
Bra010250.1-P	Field mustard	cytosol	28.21	47.34
Solyc11g069980.1.1	Tomato	cytosol	55.81	46.31
CDY23281	Canola	cytosol	27.3	45.71
CDY53047	Canola	cytosol	5.58	38.14
PGSC0003DMT400094747	Potato	cytosol	20.36	32.69
Bra031511.1-P	Field mustard	cytosol	25.49	27.35
CDY24530	Canola	cytosol, nucleus, plasma membrane	25.64	26.81
TraesCS1D01G393000.2	Wheat	cytosol	24.28	26.44
TraesCS4D01G047600.1	Wheat	golgi, nucleus, unclear	23.98	26.07
TraesCS1D01G216700.2	Wheat	cytosol	22.93	24.32
TraesCS6D01G385300.1	Wheat	cytosol	15.54	20.81
TraesCS3D01G423500.1	Wheat	cytosol	25.49	20.74
TraesCS5D01G082000.4	Wheat	cytosol	21.12	20.44
TraesCS2D01G279900.2	Wheat	cytosol	23.68	20.23
TraesCS5D01G124800.1	Wheat	cytosol	17.65	15.14
TraesCS3D01G272800.1	Wheat	plastid	17.35	14.08
TraesCS6D01G291700.1	Wheat	nucleus	15.99	11.74
TraesCS7D01G200900.1	Wheat	golgi, unclear	15.69	11.52

Protein Annotations

Gene3D:1.20.120.1240	Gene3D:3.40.50.300	MapMan:35.1	InterPro:Dynamin_GTPase	InterPro:Dynamin_SF	InterPro:Dynamin_central
InterPro:GED	InterPro:GED_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:G_DYNAMIN_dom	InterPro:IPR020850	InterPro:IPR030381
InterPro:P-loop_NTPase	PFAM:PF00350	PFAM:PF01031	PFAM:PF02212	PRINTS:PR00195	PFscan:PS51388
PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF135	SMART:SM00053	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS4D01G217900
EnsemblPlants:TraesCS4D01G217900.1	TIGR:cd08771	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4D:+:373636654..373638746

Molecular Weight (calculated)

74053.9 Da

IEP (calculated)

6.004

GRAVY (calculated)

-0.140

Length

663 amino acids

Sequence
(BLAST)

001: MSDLQMVLSD TTAASAVTGS AIAASYNDQI RPLLDAVDRL RHLKVTQEGI QLPTIVVVGD QSSGKSSVLE SLAGISLPRG QGICTRVPLV MRLQDDPAAD
101: SPVLQLEYSN GRVVTTTEAN VADAINAATA EIAGSGKGIS DAPITLVVRK RGVPDLTLVD LPGITRVPVQ GQPDDIYDQI ARIIREYIAP KESIILNVLS
201: ATVDFPTCES IRMSQQVDRT GERTLAVVTK VDKAPEGLLE KVTMDDVNIG LGYVCVRNRI GEETYDQARV EEERLFKYHP LLSKIDKDMV GIPVLAQRLV
301: QIQATIIAKC LPDIVRQIND RLSRSSTELD QMPPDLNNVA DAVREFFHIL KLVCASLEKI LVRSEFDEYP DDSHFHATAR IAEMFDRYAK KLPAQIPKGS
401: DQLFLMEEMR VLEETKGINL PNFLPRSAFL VLLKKKVDTV MQVPHDLVNE VWNYVEDIVV KVLMQHSDNF PQVQSACRRA VQGMFEKARA RSAQHVKELI
501: EMEKVADYTA NPDYMKTWSE IMQCHDRFMK AVEDKSKSAK ITLEFFGEVD VSHMRAHADL ARQAFDLRAR LTAYWKSIML RLIDGLALHI LLGVKRLVEN
601: DLEEELANEL LRNKMAGMER MLTPSPSSGT KRERLKKSIV LLRQSKEVVG SIMDRICASG ELV

Best Arabidopsis Sequence Match ( AT1G60500.1 )
(BLAST)

001: MVKKKVATKK NSPSLAIAKK KSRSNKDVVS VEAPIISSYN DRIRPLLDTV DRLRNLNVMR EGIHLPTIVV VGDQSSGKSS VLESLAGISL PRGQGICTRV
101: PLVMRLQRSS SPEPEIWLEY NDKVVPTDEE HIAEAIRAAT DVIAGSGKGV SDAPLTLHVK KAGVPDLTMV DLPGITRVPV NGQPENIYEQ ISGMIMEYIE
201: PQESIILNVL SATVDFTTCE SIRMSRKVDK TGQRTLAVVT KADMAPEGLL QKVTADDVSI VLGYVCVRNR IGEETYEEAR MQEELLFRTH PVLSLIDEDI
301: VGIPVLAQKL MLIQSSMIAR CLPKIVSKIN QKLDTAVLEL NKLPMVMAST GEALMALMDI IGSAKESLLR ILVQGDFSEY PDDQNMHCTA RLADMLSQFS
401: DSLQAKPKEV AEFLMDEIKI LDECKCVGLP NFIPRSAFLA ILSQHVDGIQ DKPVEFINKI WDYIEDVLSS VTAKRSDNFP QIQSSIKRAG RNLISKIKEQ
501: SVNRVMEIVE MEKLTDYTCN PEYMTSWTQK TSAQESFIDA VVKNENIPDY FSVTGFGNVK ISHLRKYHAH LLIPAFDMKM RITSYWKIVL RRIVDNLALY
601: LQLSVKSLVN TRFQKEIVAE MVDPRDGGGV EKMLEESPLV ASKREKLQNS IKLLKESKDA VAAIVDQNC

Arabidopsis Description

DRP4CDynamin-related protein 4C [Source:UniProtKB/Swiss-Prot;Acc:Q9ZP55]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.