Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY53048 | Canola | cytosol | 80.48 | 86.6 |
| CDY47217 | Canola | cytosol | 77.51 | 81.13 |
| CDY53046 | Canola | cytosol | 91.45 | 73.0 |
| AT1G60500.1 | Thale cress | mitochondrion | 84.39 | 67.86 |
| CDY36456 | Canola | cytosol | 22.68 | 65.59 |
| CDY34120 | Canola | cytosol | 78.81 | 64.83 |
| CDY24536 | Canola | cytosol | 78.62 | 64.68 |
| PGSC0003DMT400088564 | Potato | cytosol | 14.13 | 61.79 |
| CDY03289 | Canola | cytosol | 59.85 | 60.98 |
| CDY34117 | Canola | cytosol | 59.85 | 60.98 |
| CDY02039 | Canola | cytosol, plastid | 58.74 | 56.53 |
| KRH11082 | Soybean | cytosol | 14.68 | 54.11 |
| Solyc04g072030.1.1 | Tomato | cytosol | 61.9 | 49.33 |
| PGSC0003DMT400064542 | Potato | cytosol | 60.97 | 48.59 |
| PGSC0003DMT400050652 | Potato | cytosol | 53.16 | 46.5 |
| Zm00001d028495_P001 | Maize | cytosol | 57.62 | 45.99 |
| TraesCS4A01G213700.1 | Wheat | cytosol | 50.37 | 45.78 |
| Os03t0260000-01 | Rice | cytosol | 57.62 | 45.72 |
| KXG39737 | Sorghum | cytosol | 55.39 | 45.57 |
| TraesCS4D01G217900.1 | Wheat | cytosol | 56.13 | 45.55 |
| TraesCS4B01G217700.1 | Wheat | cytosol | 53.72 | 45.3 |
| GSMUA_Achr8P19650_001 | Banana | cytosol, mitochondrion | 46.84 | 45.24 |
| EER95148 | Sorghum | cytosol | 56.88 | 45.2 |
| PGSC0003DMT400072601 | Potato | cytosol | 51.49 | 44.75 |
| PGSC0003DMT400095128 | Potato | cytosol | 36.43 | 44.65 |
| PGSC0003DMT400064541 | Potato | cytosol | 50.74 | 44.61 |
| TraesCS4A01G086700.1 | Wheat | cytosol | 55.02 | 44.58 |
| HORVU4Hr1G061820.3 | Barley | plastid | 56.32 | 44.56 |
| CDY23281 | Canola | cytosol | 32.16 | 43.69 |
| TraesCS4D01G098800.1 | Wheat | cytosol | 53.53 | 42.11 |
| Os04t0129900-01 | Rice | cytosol | 53.35 | 41.96 |
| Zm00001d028497_P001 | Maize | cytosol | 47.96 | 41.35 |
| Solyc11g069980.1.1 | Tomato | cytosol | 59.29 | 39.92 |
| PGSC0003DMT400064491 | Potato | cytosol | 24.72 | 33.59 |
| CDY35022 | Canola | cytosol | 13.57 | 25.44 |
| CDY24530 | Canola | cytosol, nucleus, plasma membrane | 28.25 | 23.97 |
| CDY42672 | Canola | cytosol | 26.95 | 23.2 |
| CDX89053 | Canola | cytosol | 26.95 | 23.16 |
| CDX71832 | Canola | cytosol | 26.58 | 22.88 |
| CDY41188 | Canola | cytosol | 26.58 | 22.88 |
| CDX99702 | Canola | cytosol | 25.84 | 22.79 |
| CDY27661 | Canola | cytosol | 25.84 | 22.79 |
| CDY23444 | Canola | cytosol | 26.02 | 22.65 |
| CDX67529 | Canola | cytosol | 25.65 | 22.62 |
| CDX67862 | Canola | cytosol | 25.65 | 22.62 |
| CDY25074 | Canola | cytosol | 25.65 | 22.62 |
| CDY30477 | Canola | cytosol | 25.84 | 22.49 |
| CDX84001 | Canola | cytosol | 25.65 | 22.48 |
| CDY52026 | Canola | cytosol | 25.65 | 22.48 |
| CDY13364 | Canola | cytosol | 25.28 | 22.3 |
| CDX81675 | Canola | cytosol | 25.28 | 22.15 |
| CDY33737 | Canola | cytosol | 25.28 | 22.15 |
| CDY35023 | Canola | cytosol | 13.94 | 21.61 |
| CDY28314 | Canola | cytosol | 27.14 | 18.11 |
| CDY48440 | Canola | cytosol | 27.14 | 18.09 |
| CDX68994 | Canola | cytosol | 26.95 | 17.84 |
| CDY46101 | Canola | cytosol | 26.21 | 17.56 |
| CDX75370 | Canola | cytosol | 26.77 | 17.14 |
| CDX72418 | Canola | cytosol | 26.21 | 16.97 |
| CDX94910 | Canola | cytosol | 14.68 | 16.63 |
| CDY29721 | Canola | cytosol | 4.46 | 15.48 |
| CDY31035 | Canola | cytosol | 15.8 | 13.58 |
| CDY20643 | Canola | cytosol | 15.8 | 13.43 |
| CDY33414 | Canola | cytosol | 17.84 | 12.36 |
| CDY42203 | Canola | cytosol | 17.84 | 12.21 |
| CDY25877 | Canola | plastid | 17.1 | 11.18 |
| CDX93442 | Canola | cytosol | 16.54 | 9.77 |
| CDY04455 | Canola | cytosol | 16.54 | 9.69 |
| CDY45889 | Canola | cytosol | 16.54 | 9.67 |
| CDY34897 | Canola | cytosol | 15.99 | 9.4 |
| CDY44550 | Canola | cytosol | 16.54 | 9.23 |
| CDY50514 | Canola | plastid | 13.01 | 9.14 |
| CDY27283 | Canola | cytosol | 11.52 | 8.13 |
| CDX94909 | Canola | mitochondrion | 9.29 | 6.88 |
| CDY29720 | Canola | cytosol, extracellular | 3.72 | 4.67 |
| CDY53047 | Canola | cytosol | 0.19 | 1.03 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | GO:A0A078IBK2 | UniProt:A0A078IBK2 | EnsemblPlants:CDY47216 | ProteinID:CDY47216 |
| ProteinID:CDY47216.1 | InterPro:Dynamin_GTPase | InterPro:Dynamin_SF | InterPro:Dynamin_central | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00086926001 |
| InterPro:G_DYNAMIN_dom | InterPro:IPR030381 | InterPro:P-loop_NTPase | PFAM:PF00350 | PFAM:PF01031 | PRINTS:PR00195 |
| PFscan:PS51718 | PANTHER:PTHR11566 | PANTHER:PTHR11566:SF135 | SMART:SM00053 | SUPFAM:SSF52540 | UniParc:UPI0004EEE686 |
Description
BnaC09g14650DBnaC09g14650D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IBK2]
Coordinates
chrLK032703:-:33977..35949
Molecular Weight (calculated)
59850.3 Da
IEP (calculated)
5.130
GRAVY (calculated)
-0.055
Length
538 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSSKKYAVS QSCSLAIVEA NPPENKKVVP IDAPIVSSYN DRIRPLLDTV DRLRNLNVMK EGIQLPTIVV VGDQSSGKSS VLESLAGISL PRGQGICTRV
101: PLVMRLQRSS SPEPEIWLEY SDKVVPTDEE HISEAICAAT DVIAGSGKGV SDAPLTLHVK KVGVPDITMV DLPGITRVPV NGQPENIYEQ ISAMIMKYIE
201: PQESIILNVL SATVDFTTCE SIRMSRQVDK TGERTLAVVT KADMAPEGLL QKVTADDVSI GLGYVCVRNR IGEETYEEAR MQEELLFRTH PMLSLIDEEI
301: VGIPVLAQKL MHIQATMIAR CLPEIVRKIN MKMETAVLEL NKLPMVMAST GEALMTLMDI ITSAKESLLK ILIHGDFSEF PDEPKMHSTA RLADMLSQFS
401: DNLQAKPDDK EKFLMDEIKI LDECKCVGLP NFIPRSAFLA ILSQHVDVIH MKPVEFIKKI WDYIEGVLIS VLSKYSENFP QIQSSVKRAG RNLITKMKEQ
501: AVNRVTEIVE MEKLTDYTCN PDYMKTNLRT SLSLDLGM
101: PLVMRLQRSS SPEPEIWLEY SDKVVPTDEE HISEAICAAT DVIAGSGKGV SDAPLTLHVK KVGVPDITMV DLPGITRVPV NGQPENIYEQ ISAMIMKYIE
201: PQESIILNVL SATVDFTTCE SIRMSRQVDK TGERTLAVVT KADMAPEGLL QKVTADDVSI GLGYVCVRNR IGEETYEEAR MQEELLFRTH PMLSLIDEEI
301: VGIPVLAQKL MHIQATMIAR CLPEIVRKIN MKMETAVLEL NKLPMVMAST GEALMTLMDI ITSAKESLLK ILIHGDFSEF PDEPKMHSTA RLADMLSQFS
401: DNLQAKPDDK EKFLMDEIKI LDECKCVGLP NFIPRSAFLA ILSQHVDVIH MKPVEFIKKI WDYIEGVLIS VLSKYSENFP QIQSSVKRAG RNLITKMKEQ
501: AVNRVTEIVE MEKLTDYTCN PDYMKTNLRT SLSLDLGM
001: MVKKKVATKK NSPSLAIAKK KSRSNKDVVS VEAPIISSYN DRIRPLLDTV DRLRNLNVMR EGIHLPTIVV VGDQSSGKSS VLESLAGISL PRGQGICTRV
101: PLVMRLQRSS SPEPEIWLEY NDKVVPTDEE HIAEAIRAAT DVIAGSGKGV SDAPLTLHVK KAGVPDLTMV DLPGITRVPV NGQPENIYEQ ISGMIMEYIE
201: PQESIILNVL SATVDFTTCE SIRMSRKVDK TGQRTLAVVT KADMAPEGLL QKVTADDVSI VLGYVCVRNR IGEETYEEAR MQEELLFRTH PVLSLIDEDI
301: VGIPVLAQKL MLIQSSMIAR CLPKIVSKIN QKLDTAVLEL NKLPMVMAST GEALMALMDI IGSAKESLLR ILVQGDFSEY PDDQNMHCTA RLADMLSQFS
401: DSLQAKPKEV AEFLMDEIKI LDECKCVGLP NFIPRSAFLA ILSQHVDGIQ DKPVEFINKI WDYIEDVLSS VTAKRSDNFP QIQSSIKRAG RNLISKIKEQ
501: SVNRVMEIVE MEKLTDYTCN PEYMTSWTQK TSAQESFIDA VVKNENIPDY FSVTGFGNVK ISHLRKYHAH LLIPAFDMKM RITSYWKIVL RRIVDNLALY
601: LQLSVKSLVN TRFQKEIVAE MVDPRDGGGV EKMLEESPLV ASKREKLQNS IKLLKESKDA VAAIVDQNC
101: PLVMRLQRSS SPEPEIWLEY NDKVVPTDEE HIAEAIRAAT DVIAGSGKGV SDAPLTLHVK KAGVPDLTMV DLPGITRVPV NGQPENIYEQ ISGMIMEYIE
201: PQESIILNVL SATVDFTTCE SIRMSRKVDK TGQRTLAVVT KADMAPEGLL QKVTADDVSI VLGYVCVRNR IGEETYEEAR MQEELLFRTH PVLSLIDEDI
301: VGIPVLAQKL MLIQSSMIAR CLPKIVSKIN QKLDTAVLEL NKLPMVMAST GEALMALMDI IGSAKESLLR ILVQGDFSEY PDDQNMHCTA RLADMLSQFS
401: DSLQAKPKEV AEFLMDEIKI LDECKCVGLP NFIPRSAFLA ILSQHVDGIQ DKPVEFINKI WDYIEDVLSS VTAKRSDNFP QIQSSIKRAG RNLISKIKEQ
501: SVNRVMEIVE MEKLTDYTCN PEYMTSWTQK TSAQESFIDA VVKNENIPDY FSVTGFGNVK ISHLRKYHAH LLIPAFDMKM RITSYWKIVL RRIVDNLALY
601: LQLSVKSLVN TRFQKEIVAE MVDPRDGGGV EKMLEESPLV ASKREKLQNS IKLLKESKDA VAAIVDQNC
Arabidopsis Description
DRP4CDynamin-related protein 4C [Source:UniProtKB/Swiss-Prot;Acc:Q9ZP55]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.