CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX93442
CDX94909
CDX94910
CDY04455	plasma membrane
CDY20643
CDY27283	plasma membrane
CDY31035
CDY34897
CDY44550	plasma membrane
CDY45889	plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G10290.1	CDX93442	AT1G10290.1	25462567
AT1G10290.1	CDX94909	AT1G10290.1	25462567
AT1G10290.1	CDX94910	AT1G10290.1	25462567
AT1G10290.1	CDY20643	AT1G10290.1	25462567
AT1G10290.1	CDY31035	AT1G10290.1	25462567
AT1G10290.1	CDY34897	AT1G10290.1	25462567
AT1G10290.1	CDY04455	AT1G59610.1	25462567
AT1G10290.1	CDY27283	AT1G59610.1	25462567
AT1G10290.1	CDY44550	AT1G59610.1	25462567
AT1G10290.1	CDY45889	AT1G59610.1	25462567
AT1G10290.1	CDY04455	AT1G59610.1	25462567
AT1G10290.1	CDY27283	AT1G59610.1	25462567
AT1G10290.1	CDY44550	AT1G59610.1	25462567
AT1G10290.1	CDY45889	AT1G59610.1	25462567

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031707.1-P	Field mustard	cytosol	100.0	100.0
AT1G10290.1	Thale cress	cytosol	93.99	94.09
CDY31035	Canola	cytosol	64.26	93.93
CDX93442	Canola	cytosol	93.11	93.52
CDX94910	Canola	cytosol	48.52	93.47
CDY20643	Canola	cytosol	63.61	91.94
CDX94909	Canola	mitochondrion	73.01	91.88
CDY04455	Canola	cytosol	89.73	89.43
CDY45889	Canola	cytosol	89.84	89.35
CDY27283	Canola	cytosol	73.88	88.6
CDY44550	Canola	cytosol	89.51	84.96
VIT_18s0089g00350.t01	Wine grape	cytosol	80.22	78.84
KRH27552	Soybean	cytosol	78.69	78.09
KRH36411	Soybean	endoplasmic reticulum, nucleus	78.36	77.77
GSMUA_Achr1P18350_001	Banana	cytosol	73.11	74.83
GSMUA_Achr7P05530_001	Banana	nucleus	75.19	74.7
VIT_15s0107g00170.t01	Wine grape	cytosol	19.13	74.47
GSMUA_Achr4P20040_001	Banana	cytosol	74.54	74.21
EER88160	Sorghum	cytosol, endoplasmic reticulum, nucleus	73.33	73.49
Zm00001d037279_P005	Maize	plasma membrane	73.01	73.17
GSMUA_Achr3P01090_001	Banana	nucleus	73.11	72.88
Zm00001d044757_P006	Maize	cytosol, nucleus, plasma membrane	72.46	72.62
TraesCS7D01G200900.1	Wheat	golgi, unclear	71.48	72.43
Os06t0247800-01	Rice	plasma membrane	71.91	72.23
TraesCS7A01G198100.1	Wheat	cytosol, nucleus, plasma membrane	71.26	72.2
EES05560	Sorghum	nucleus	72.46	71.99
TraesCS7B01G104500.1	Wheat	golgi, unclear	71.04	71.98
Zm00001d017979_P002	Maize	extracellular, mitochondrion	72.35	71.88
TraesCS6D01G291700.1	Wheat	nucleus	70.93	71.87
HORVU7Hr1G040670.2	Barley	cytosol, nucleus, plasma membrane	70.71	71.73
TraesCS6A01G312300.3	Wheat	nucleus	71.04	71.43
Os02t0738900-01	Rice	plasma membrane	71.8	71.18
TraesCS6B01G342500.2	Wheat	cytosol	68.31	67.71
HORVU6Hr1G077000.1	Barley	cytosol, mitochondrion, nucleus	71.15	67.04
Os08t0425100-01	Rice	plasma membrane	55.96	66.84
KXG25176	Sorghum	cytosol	54.75	66.62
VIT_19s0015g02240.t01	Wine grape	golgi, mitochondrion, plasma membrane	19.13	66.04
Zm00001d032256_P001	Maize	cytosol	57.7	56.77
Zm00001d051815_P002	Maize	cytosol	32.13	53.55
CDX71832	Canola	cytosol	20.44	29.92
CDX89053	Canola	cytosol	20.44	29.87
CDY41188	Canola	cytosol	20.33	29.76
CDY42672	Canola	cytosol	20.33	29.76
CDY25074	Canola	cytosol	19.34	29.02
CDX67862	Canola	cytosol	19.23	28.85
CDX81675	Canola	cytosol	19.34	28.83
CDY33737	Canola	cytosol	19.34	28.83
CDY23444	Canola	cytosol	19.45	28.8
CDY30477	Canola	cytosol	19.45	28.8
CDX99702	Canola	cytosol	19.02	28.52
CDY27661	Canola	cytosol	19.02	28.52
CDX84001	Canola	cytosol	19.13	28.5
CDY52026	Canola	cytosol	19.13	28.5
CDX67529	Canola	cytosol	18.91	28.36
CDY13364	Canola	cytosol	18.91	28.36
CDX68994	Canola	cytosol	17.16	19.31
CDY28314	Canola	cytosol	16.83	19.11
CDY48440	Canola	cytosol	16.72	18.96
CDY46101	Canola	cytosol	16.5	18.8
CDY35023	Canola	cytosol	7.1	18.73
CDY35022	Canola	cytosol	5.79	18.47
CDX75370	Canola	cytosol	16.83	18.33
CDX72418	Canola	cytosol	16.5	18.17
CDY29721	Canola	cytosol	2.73	16.13
CDY03289	Canola	cytosol	9.29	16.1
CDY34117	Canola	cytosol	9.29	16.1
CDY47216	Canola	cytosol	9.4	15.99
CDY53048	Canola	cytosol	8.52	15.6
CDY24536	Canola	cytosol	11.15	15.6
CDY34120	Canola	cytosol	11.15	15.6
CDY02039	Canola	cytosol, plastid	9.4	15.38
CDY47217	Canola	cytosol	8.63	15.37
CDY53046	Canola	cytosol	11.15	15.13
CDY36456	Canola	cytosol	3.06	15.05
CDY23281	Canola	cytosol	6.34	14.65
CDY33414	Canola	cytosol	12.13	14.29
CDY42203	Canola	cytosol	12.24	14.25
CDY53047	Canola	cytosol	1.42	13.4
CDY25877	Canola	plastid	11.04	12.27
CDY50514	Canola	plastid	9.51	11.36
CDY24530	Canola	cytosol, nucleus, plasma membrane	7.32	10.57
HORVU4Hr1G074040.2	Barley	nucleus	2.73	9.77
HORVU5Hr1G092990.14	Barley	cytosol	2.73	9.43
HORVU4Hr1G073960.12	Barley	cytosol	3.83	8.77
CDY29720	Canola	cytosol, extracellular	3.28	7.01

Protein Annotations

Gene3D:1.20.120.1240	Gene3D:2.30.29.30	MapMan:22.1.7.2	Gene3D:3.40.50.300	GO:A0A078HAU9	UniProt:A0A078HAU9
EnsemblPlants:CDY34897	ProteinID:CDY34897	ProteinID:CDY34897.1	ncoils:Coil	InterPro:Dynamin_GTPase	InterPro:Dynamin_GTPase_CS
InterPro:Dynamin_SF	InterPro:Dynamin_central	InterPro:GED	InterPro:GED_dom	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00057464001
InterPro:G_DYNAMIN_dom	InterPro:IPR001849	InterPro:IPR011993	InterPro:IPR020850	InterPro:IPR030381	InterPro:P-loop_NTPase
PFAM:PF00169	PFAM:PF00350	PFAM:PF01031	PFAM:PF02212	InterPro:PH-like_dom_sf	InterPro:PH_domain
PRINTS:PR00195	ScanProsite:PS00410	PFscan:PS50003	PFscan:PS51388	PFscan:PS51718	PANTHER:PTHR11566
PANTHER:PTHR11566:SF57	SMART:SM00053	SMART:SM00233	SUPFAM:SSF50729	SUPFAM:SSF52540	UniParc:UPI00025431BE
SEG:seg	:	:	:	:	:

Description

BnaA09g48230DBnaA09g48230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HAU9]

Coordinates

chrLK032342:-:377706..384448

Molecular Weight (calculated)

99527.3 Da

IEP (calculated)

9.574

GRAVY (calculated)

-0.507

Length

915 amino acids

Sequence
(BLAST)

001: MDAIDELSQL SDSMKQAASL LADEDPDETS SSKRPATFLN VVALGNVGAG KSAALNSLIG HPILPTGENG ATRAPIIIDL SRDASLSSKA IILQIDNKNQ
101: QVSASALRHS LQDRLGKGAS GKNRDEIYLK LRTSTAPPLK LVDMPGLDQR IVDDSMIAQY AQHNDAILLV IVPASQASEI LSSRALKIAK EYDPESTRTV
201: GIIGKIDQAA ENPKALAAVQ ALLSNQGPPK TTDIPWVALI GQSVAIASAQ SGSGENSLET AWRAESESLK SILTGAPQSK LGRIALVDTL ASQIRSRMKL
301: RLPNILSGLQ GKSQTVQSEL ARLGEQLVDS AEGTRAIALE LCREFEEKFL LHLVGGEGSG WKVVESFEGN FPNRIKQLPL DRHFDLNNVK RVVLEADGYQ
401: PYLISPEKGL RSLIKIVLEL AKDPARLCVD EVHRVLVDIV SASANATPGL GRYPPFKREV VAIASAALDG FKNEAKKMVV ALVDMERAFV PPQHFIRLVQ
501: RRMERQRREE ELKGRSSKKG QDAEQSLLSR ASSPQPDGPI AGGSMKSMKD KPSPQDKESP EVSGLKTAGP EGEITAGYLM KKSAKTNGWS RRWFVLNEKT
601: GKLGYTKKQE ERNFRGTITL EECTIEELPE EEVEKSKSSK DKKANGPDSK GPGLVFKLTC KVPYKTVLKA HNALVLKAES VVDKNEWINK LQKVIQARGG
701: QVVNVSMRHS LSEGSIDKMA RKPIDPEEEL RWMSQEVRGY VEAVLNSLAA NVPKAVVLCQ VEKAKEDMLN QLYSSISAIG NERIESLIQE DQNVKRRRER
801: YQKQSSLLSK LTRQLSVHDN RAAAASSWSD NGAPESSPRT SGGSSSGDDW RNAFNSAANG APDSLSRYGS GGHSRRYSDP AQNGEAESPG SGSNRRTTPN
901: RLPPGPPQAG SSYKY

Best Arabidopsis Sequence Match ( AT1G10290.1 )
(BLAST)

001: MEAIDELSQL SDSMKQAASL LADEDPDETS SSKRPATFLN VVALGNVGAG KSAVLNSLIG HPVLPTGENG ATRAPIIIEL SRESSLSSKA IILQIDNKSQ
101: QVSASALRHS LQDRLSKGAS GKNRDEINLK LRTSTAPPLK LVDLPGLDQR IVDESMIAEY AQHNDAILLV IVPASQASEI SSSRALKIAK EYDPESTRTI
201: GIIGKIDQAA ENSKALAAVQ ALLSNQGPPK TTDIPWVAVI GQSVSIASAQ SGSGENSLET AWRAESESLK SILTGAPQSK LGRIALVDTL ASQIRSRMKL
301: RLPSVLSGLQ GKSQIVQDEL ARLGEQLVNS AEGTRAIALE LCREFEDKFL LHLAGGEGSG WKVVASFEGN FPNRIKQLPL DRHFDLNNVK RVVLEADGYQ
401: PYLISPEKGL RSLIKIVLEL AKDPARLCVD EVHRVLVDIV SASANATPGL GRYPPFKREV VAIASAALDG FKNEAKKMVV ALVDMERAFV PPQHFIRLVQ
501: RRMERQRREE ELKGRSSKKG QDAEQSLLSR ATSPQPDGPT AGGSLKSMKD KPSPQDKETP EVSGLKTAGP EGEITAGYLM KKSAKTNGWS RRWFVLNEKT
601: GKLGYTKKQE ERNFRGTITL EECTIEEIPE DEVEKSKSSK DKKANGPDSK GPGLVFKITC KVPYKTVLKA HNALVLKAES VVDKNEWINK LQKVIQARGG
701: QVGSVSMRQS LSEGSLDKMV RKPIDPEEEL RWMSQEVRGY VEAVLNSLAA NVPKAVVLCQ VEKAKEDMLN QLYSSISAIG NERIESLIQE DQNVKRRRER
801: YQKQSSLLSK LTRQLSIHDN RAAAASSYSD NSGTESSPRA SGGSSGDDWM NAFNSAANGP SDSLSKYGSG GHSRRYSDPA QNGDAASPGS GSNRRTTPNR
901: LPPAPPPTGS AYRY

Arabidopsis Description

DRP2ADRP2A [Source:UniProtKB/TrEMBL;Acc:A0A178WBB3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.