CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EER88160	plasma membrane
EES01270
EES05560	plasma membrane
EES19921
KXG25176	plasma membrane
KXG37727

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G10290.1	EER88160	AT1G10290.1	25462567
AT1G10290.1	EES05560	AT1G10290.1	25462567
AT1G10290.1	KXG25176	AT1G10290.1	25462567
AT1G10290.1	EER88160	AT1G59610.1	25462567
AT1G10290.1	EES05560	AT1G59610.1	25462567
AT1G10290.1	KXG25176	AT1G59610.1	25462567
AT1G10290.1	EER88160	AT1G59610.1	25462567
AT1G10290.1	EES05560	AT1G59610.1	25462567
AT1G10290.1	KXG25176	AT1G59610.1	25462567
AT1G59610.1	KXG37727	AT1G14830.1	21798944
AT1G59610.1	EER88160	AT1G59610.1	25462567
AT1G59610.1	EES05560	AT1G59610.1	25462567
AT1G59610.1	KXG25176	AT1G59610.1	25462567
AT1G59610.1	EES01270	AT5G42080.1	20231465
AT1G59610.1	EES19921	AT5G42080.1	20231465

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0425100-01	Rice	plasma membrane	80.59	79.11
Zm00001d032256_P001	Maize	cytosol	88.3	71.4
CDX94910	Canola	cytosol	43.75	69.26
CDY31035	Canola	cytosol	56.91	68.37
CDY20643	Canola	cytosol	56.91	67.61
VIT_15s0107g00170.t01	Wine grape	cytosol	20.61	65.96
VIT_00s0267g00020.t01	Wine grape	cytosol	12.77	61.15
GSMUA_Achr1P18350_001	Banana	cytosol	70.74	59.51
GSMUA_Achr4P20040_001	Banana	cytosol	71.81	58.76
GSMUA_Achr7P05530_001	Banana	nucleus	71.54	58.41
VIT_18s0089g00350.t01	Wine grape	cytosol	71.94	58.11
EER88160	Sorghum	cytosol, endoplasmic reticulum, nucleus	70.48	58.05
EES05560	Sorghum	nucleus	70.88	57.87
VIT_19s0015g02240.t01	Wine grape	golgi, mitochondrion, plasma membrane	20.35	57.74
GSMUA_Achr3P01090_001	Banana	nucleus	69.02	56.54
KRH27552	Soybean	cytosol	69.28	56.51
AT1G10290.1	Thale cress	cytosol	68.62	56.46
CDX93442	Canola	cytosol	68.22	56.31
KRH36411	Soybean	endoplasmic reticulum, nucleus	69.02	56.29
CDY45889	Canola	cytosol	68.22	55.76
AT1G59610.1	Thale cress	cytosol	67.95	55.54
CDY04455	Canola	cytosol	67.42	55.23
Bra018449.1-P	Field mustard	cytosol	67.02	55.2
Bra031707.1-P	Field mustard	cytosol	66.62	54.75
CDY34897	Canola	cytosol	66.62	54.75
Bra019950.1-P	Field mustard	cytosol	68.22	54.63
Bra017901.1-P	Field mustard	cytosol	67.55	53.76
CDY27283	Canola	cytosol	54.39	53.6
CDY44550	Canola	cytosol	68.35	53.32
CDX94909	Canola	mitochondrion	50.13	51.86
Bra035433.1-P	Field mustard	cytosol	68.09	51.15
EES19921	Sorghum	cytosol	20.35	25.12
EES01270	Sorghum	cytosol	19.68	24.3
KXG38886	Sorghum	cytosol	20.08	23.97
EER98546	Sorghum	cytosol	19.81	23.88
KXG37727	Sorghum	cytosol, mitochondrion	19.41	23.86
OQU81360	Sorghum	cytosol	16.89	16.8
EES04116	Sorghum	cytosol	17.15	15.75
EER95148	Sorghum	cytosol	12.1	13.44
KXG39737	Sorghum	cytosol	11.17	12.84
EES16755	Sorghum	cytosol	12.5	12.42
EES03602	Sorghum	plastid	12.23	11.15

Protein Annotations

Gene3D:1.20.120.1240	Gene3D:2.30.29.30	MapMan:22.1.7.2	Gene3D:3.40.50.300	UniProt:A0A1B6PHL0	InterPro:Dynamin_GTPase
InterPro:Dynamin_GTPase_CS	InterPro:Dynamin_SF	InterPro:Dynamin_central	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:G_DYNAMIN_dom	InterPro:IPR001849
InterPro:IPR011993	InterPro:IPR030381	EnsemblPlants:KXG25176	ProteinID:KXG25176	ProteinID:KXG25176.1	InterPro:P-loop_NTPase
PFAM:PF00169	PFAM:PF00350	PFAM:PF01031	InterPro:PH-like_dom_sf	InterPro:PH_domain	PRINTS:PR00195
ScanProsite:PS00410	PFscan:PS50003	PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF136	SMART:SM00053
SMART:SM00233	EnsemblPlantsGene:SORBI_3007G131000	SUPFAM:SSF50729	SUPFAM:SSF52540	UniParc:UPI00081AB7D2	SEG:seg

Description

hypothetical protein

Coordinates

chr7:+:54764344..54780303

Molecular Weight (calculated)

82017.5 Da

IEP (calculated)

9.255

GRAVY (calculated)

-0.358

Length

752 amino acids

Sequence
(BLAST)

001: MEAMEELAEL ADTTLQGTAL LADDDPSADD DRPSRRGSSF LTVVAIGNVG AGKSAVLNGL IGHPVLPTGE NGATRAPICV ELQRDASLSS KAIVLQIDSK
101: SQQISASSLR HSLQDRLSKA SGKGRSDEIT VKLCTSTAPP LKLIDIPGVD QRSTDESMIS NYAARNDAIL LVIIPALQAP DVASSRALRI ARELDSEGTR
201: TIGVLSKIDQ ASGEQKALGA VQALLVNQGP RTAADIQWVA TIGHSVPTAS AQSEVGSETS SEAYWQAEVK TLISILGGAP QSKLGRVALV DSLAKQIKTR
301: ITARLPNLLN GLQGKSQIVQ EELGKLGEQM AESSDGTKAI ALGLCREFED KFLEHIAGGE GGGWKVVASF EGKFPTRIKQ LPLDKHFDMK NVKKVVLEAD
401: GYQPYLISPE KGLRFLIKGL LELAKEPSIL LVDEVHRVLL DIVSAAANAT PGLGRYPPFK REVIAIASAA LDGFKNEARK MVIALIDMER AFVPPQHFIR
501: LVQRRMERQR QEDELKNRST RKGQDPDKSR DTTPQKKSHQ EEMKQASNLQ VLGPAGEIIA GFLFKKRAKA NDWSKRWFVL NEKTGKLGYT KKQEERHFRG
601: VINLEDCNLE EILDDEDPPR SSKDSKKANM LDTGKDSSLI FKITHKIAYK NVLKAHNAVI LKAESMSDKT EWVTKIKSIV DPKGLAAKKQ ISSEGGGPMK
701: QIHSDGSLET TLKKPVNPEE ELRWISQEVR GYVEAVLSSL AANVPKLWFS AK

Best Arabidopsis Sequence Match ( AT1G59610.1 )
(BLAST)

001: MEAIDELSQL SDSMRQAASL LADEDPDETS SSRRPATSLN VVALGNVGAG KSAVLNSLIG HPVLPTGENG ATRAPIIIDL SREESLSSKA IILQIDNKNQ
101: QVSASALRHS LQDRLSKGAS GRGRDEIYLK LRTSTAPPLK LIDLPGLDQR IVDDSMIGEH AQHNDAILLV VVPASQASEI SSSRALKIAK EYDPESTRTV
201: GIISKIDQAA ENPKSLAAVQ ALLSNQGPPK TTDIPWVALI GQSVSIASAQ SGGSENSLET AWRAESESLK SILTGAPQSK LGRIALVDTL ASQIRSRMKL
301: RLPNILTGLQ GKSQIVQDEL ARLGEQLVSS AEGTRAIALE LCREFEDKFL LHLAGGEGSG WKVVASFEGN FPNRIKKLPL DRHFDLNNVK RIVLEADGYQ
401: PYLISPEKGL RSLIKTVLEL AKDPARLCVD EVHRVLVDIV SASANATPGL GRYPPFKREV VAIASAALDG FKNEAKKMVV ALVDMERAFV PPQHFIRLVQ
501: RRMERQRREE ELKGRSSKKG QDAEQSLLNR ATSPQPDGPS STGGSLKSLR DKLMPQDKDK DKEKETPEVS GLKTAGPEGE ITAGYLMKKS AKTNGWSRRW
601: FVLNEKTGKL GYTKKQEERN FRGTVTLEEC SIEEISDDEG EKSKSSKDKK SNGPDSKGPG LVFKITCRVP YKTVLKAHNA LVLKAESMVD KNEWINKLQK
701: VIQARGGQVG SASMRQSLSE GSLDKMVRKP VDPEEELRWM SQEVRGYVEA VLNSLAANVP KAVVLCQVEK SKEDMLNQLY SSISAIGNER IESLIQEDQN
801: VKRRRDRYQK QSSLLSKLTR QLSIHDNRAA AASSWSDNSG TESSPRTNGG SSGEDWMNAF NAAASGPDSL KRYGSGGHSR RYSDPAQNGE DSSGSGGSSR
901: RTTPNRLPPA PPQSGSSYRY

Arabidopsis Description

DRP2BDynamin-2B [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ55]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.