Factsheet for Bra018449.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra017901.1-P	plasma membrane
Bra018449.1-P
Bra019950.1-P
Bra031707.1-P
Bra035433.1-P	plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G10290.1	Bra018449.1-P	AT1G10290.1	25462567
AT1G10290.1	Bra019950.1-P	AT1G10290.1	25462567
AT1G10290.1	Bra031707.1-P	AT1G10290.1	25462567
AT1G10290.1	Bra017901.1-P	AT1G59610.1	25462567
AT1G10290.1	Bra035433.1-P	AT1G59610.1	25462567
AT1G10290.1	Bra017901.1-P	AT1G59610.1	25462567
AT1G10290.1	Bra035433.1-P	AT1G59610.1	25462567

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31035	Canola	cytosol	68.13	99.36
CDY20643	Canola	cytosol	67.47	97.31
AT1G10290.1	Thale cress	cytosol	93.65	93.54
Bra031707.1-P	Field mustard	cytosol	93.54	93.33
Bra019950.1-P	Field mustard	cytosol	93.43	90.84
Bra017901.1-P	Field mustard	cytosol	90.03	86.98
Bra035433.1-P	Field mustard	cytosol	89.7	81.82
VIT_18s0089g00350.t01	Wine grape	cytosol	79.74	78.2
KRH27552	Soybean	cytosol	77.55	76.79
KRH36411	Soybean	endoplasmic reticulum, nucleus	77.33	76.57
GSMUA_Achr7P05530_001	Banana	nucleus	75.68	75.03
GSMUA_Achr4P20040_001	Banana	cytosol	75.36	74.86
GSMUA_Achr1P18350_001	Banana	cytosol	73.17	74.72
EER88160	Sorghum	cytosol, endoplasmic reticulum, nucleus	74.15	74.15
Zm00001d037279_P005	Maize	plasma membrane	73.82	73.82
TraesCS7A01G198100.1	Wheat	cytosol, nucleus, plasma membrane	72.51	73.31
TraesCS7D01G200900.1	Wheat	golgi, unclear	72.51	73.31
HORVU7Hr1G040670.2	Barley	cytosol, nucleus, plasma membrane	72.29	73.17
TraesCS7B01G104500.1	Wheat	golgi, unclear	72.29	73.09
GSMUA_Achr3P01090_001	Banana	nucleus	73.38	72.98
Zm00001d044757_P006	Maize	cytosol, nucleus, plasma membrane	72.95	72.95
EES05560	Sorghum	nucleus	73.49	72.86
Zm00001d017979_P002	Maize	extracellular, mitochondrion	73.38	72.75
Os06t0247800-01	Rice	plasma membrane	72.29	72.45
VIT_15s0107g00170.t01	Wine grape	cytosol	18.62	72.34
Os02t0738900-01	Rice	plasma membrane	72.29	71.51
TraesCS6D01G291700.1	Wheat	nucleus	70.65	71.43
TraesCS6A01G312300.3	Wheat	nucleus	70.76	70.99
TraesCS6B01G342500.2	Wheat	cytosol	68.13	67.39
KXG25176	Sorghum	cytosol	55.2	67.02
HORVU6Hr1G077000.1	Barley	cytosol, mitochondrion, nucleus	71.08	66.84
Os08t0425100-01	Rice	plasma membrane	55.75	66.45
VIT_19s0015g02240.t01	Wine grape	golgi, mitochondrion, plasma membrane	18.62	64.15
Zm00001d032256_P001	Maize	cytosol	57.72	56.67
Zm00001d051815_P002	Maize	cytosol	32.53	54.1
Bra007513.1-P	Field mustard	cytosol	20.48	29.92
Bra014507.1-P	Field mustard	cytosol	20.48	29.87
Bra003469.1-P	Field mustard	cytosol	18.51	29.39
Bra037643.1-P	Field mustard	cytosol	19.39	28.64
Bra028525.1-P	Field mustard	cytosol	19.06	28.52
Bra026801.1-P	Field mustard	cytosol	19.06	28.34
Bra025448.1-P	Field mustard	cytosol	18.07	28.3
Bra016679.1-P	Field mustard	cytosol	18.95	28.18
Bra034579.1-P	Field mustard	cytosol	16.76	18.96
Bra011458.1-P	Field mustard	cytosol	16.65	18.84
Bra036991.1-P	Field mustard	cytosol	16.32	18.46
Bra010250.1-P	Field mustard	cytosol	6.9	15.95
Bra031505.1-P	Field mustard	cytosol	9.86	15.73
Bra027151.1-P	Field mustard	cytosol	11.61	15.7
Bra031502.1-P	Field mustard	cytosol	11.17	15.6
Bra038229.1-P	Field mustard	cytosol	11.61	13.49
Bra038100.1-P	Field mustard	cytosol	11.06	12.32
Bra037604.1-P	Field mustard	plastid	9.2	10.91
HORVU4Hr1G074040.2	Barley	nucleus	2.85	10.16
HORVU5Hr1G092990.14	Barley	cytosol	2.85	9.81
Bra031511.1-P	Field mustard	cytosol	6.57	9.71
HORVU4Hr1G073960.12	Barley	cytosol	3.83	8.77

Protein Annotations

Gene3D:1.20.120.1240	Gene3D:2.30.29.30	MapMan:22.1.7.2	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra018449	EnsemblPlants:Bra018449.1
EnsemblPlants:Bra018449.1-P	ncoils:Coil	InterPro:Dynamin_GTPase	InterPro:Dynamin_GTPase_CS	InterPro:Dynamin_SF	InterPro:Dynamin_central
InterPro:GED	InterPro:GED_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:G_DYNAMIN_dom	InterPro:IPR001849	InterPro:IPR011993
InterPro:IPR020850	InterPro:IPR030381	UniProt:M4DPK8	InterPro:P-loop_NTPase	PFAM:PF00169	PFAM:PF00350
PFAM:PF01031	PFAM:PF02212	InterPro:PH-like_dom_sf	InterPro:PH_domain	PRINTS:PR00195	ScanProsite:PS00410
PFscan:PS50003	PFscan:PS51388	PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF57	SMART:SM00053
SMART:SM00233	SUPFAM:SSF50729	SUPFAM:SSF52540	UniParc:UPI0002547F4A	SEG:seg	:

Description

AT1G10290 (E=0.0) ADL6, DRP2A | ADL6 (DYNAMIN-LIKE PROTEIN 6); GTPase

Coordinates

chrA05:-:8272095..8278363

Molecular Weight (calculated)

99305.7 Da

IEP (calculated)

9.536

GRAVY (calculated)

-0.521

Length

913 amino acids

Sequence
(BLAST)

001: MEAIDELSQL SDSMKQAASL LADEDPDETS SSSRRPATFL NVVALGNVGA GKSAVLNSLI GHAILPTGEN GATRAPIIVD LSRESSLSSK AIILQIDNKS
101: QQVSATALRH NLQDRLGKAA PGKNRDEIYL KLRTSTAPPL KLVDLPGLDQ RIVDDSMIAE YAQHNDAILL VIIPASQASE ISSSRALKIA KEHDPESTRT
201: VGIIGKIDQA EGNAKALAAV QALLSNQGPP KTTDIPWVAL IGQSVSIASA AQSGSGENSL ETAWRAESES LNKTLTGAPQ SKLGRNALVE TLASQIRSRM
301: KLRLPNILSG LQGKSQMVQN ELARLGEQLV DSAEGTRAIA LELCREFEEK FLLHLAGGEG SGWKVVASFE GNFPNRIKQL PLDRHFDLNN VKRVVLEADG
401: YQPYLISPEK GLRSLIKIVL EMAKDPARLC VDEVHRVLVD IVSASANATP GLGRYPPFKR EVVAIASAAL DGFKNEAKKM VVALVDMERA FVPPQHFIRL
501: VQRRMERQRR EDELKGRSSK KGQDAEQSLL SRASSPQPDG PIAGGSMKSM KDKPSPQDKE TREVSGLKTA GPEGEITAGY LMKKSAKTNG WSRRWFVLNE
601: KTGKLGYTKK QEERNFRGTI TLEECTIEEI PEEEVEKSKS SKDKKANGPD SKGPGLVFKI TCKVPYKTVL KAHNALVLKA ESVVDKNEWI NKLQKVIQAR
701: GGQVGNVSMR QSFSDGSLDK MVRKPADPEE ELRWMSQEVR GYVEAVLNSL AANAVVLCQV EKSKEDMLNQ LYSSISAIGN ERIESLIQED QNVKRRRERY
801: QKQSSLLSTL TRQLSIHDNR AAAASSWSDN GATESSPRTS GGSSGDDWMN AFNSAANGAS DSLSRYGSGG HSRRYSDPAQ NGDASSSSSG SNRRSTPNRL
901: PPAPPQSGSS YRY

Best Arabidopsis Sequence Match ( AT1G10290.1 )
(BLAST)

001: MEAIDELSQL SDSMKQAASL LADEDPDETS SSKRPATFLN VVALGNVGAG KSAVLNSLIG HPVLPTGENG ATRAPIIIEL SRESSLSSKA IILQIDNKSQ
101: QVSASALRHS LQDRLSKGAS GKNRDEINLK LRTSTAPPLK LVDLPGLDQR IVDESMIAEY AQHNDAILLV IVPASQASEI SSSRALKIAK EYDPESTRTI
201: GIIGKIDQAA ENSKALAAVQ ALLSNQGPPK TTDIPWVAVI GQSVSIASAQ SGSGENSLET AWRAESESLK SILTGAPQSK LGRIALVDTL ASQIRSRMKL
301: RLPSVLSGLQ GKSQIVQDEL ARLGEQLVNS AEGTRAIALE LCREFEDKFL LHLAGGEGSG WKVVASFEGN FPNRIKQLPL DRHFDLNNVK RVVLEADGYQ
401: PYLISPEKGL RSLIKIVLEL AKDPARLCVD EVHRVLVDIV SASANATPGL GRYPPFKREV VAIASAALDG FKNEAKKMVV ALVDMERAFV PPQHFIRLVQ
501: RRMERQRREE ELKGRSSKKG QDAEQSLLSR ATSPQPDGPT AGGSLKSMKD KPSPQDKETP EVSGLKTAGP EGEITAGYLM KKSAKTNGWS RRWFVLNEKT
601: GKLGYTKKQE ERNFRGTITL EECTIEEIPE DEVEKSKSSK DKKANGPDSK GPGLVFKITC KVPYKTVLKA HNALVLKAES VVDKNEWINK LQKVIQARGG
701: QVGSVSMRQS LSEGSLDKMV RKPIDPEEEL RWMSQEVRGY VEAVLNSLAA NVPKAVVLCQ VEKAKEDMLN QLYSSISAIG NERIESLIQE DQNVKRRRER
801: YQKQSSLLSK LTRQLSIHDN RAAAASSYSD NSGTESSPRA SGGSSGDDWM NAFNSAANGP SDSLSKYGSG GHSRRYSDPA QNGDAASPGS GSNRRTTPNR
901: LPPAPPPTGS AYRY

Arabidopsis Description

DRP2ADRP2A [Source:UniProtKB/TrEMBL;Acc:A0A178WBB3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.