Factsheet for Bra010250.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY23281	Canola	cytosol	94.94	94.7
PGSC0003DMT400088564	Potato	cytosol	14.94	47.97
CDY36456	Canola	cytosol	22.53	47.85
Bra031502.1-P	Field mustard	cytosol	71.39	43.12
Bra027151.1-P	Field mustard	cytosol	66.58	38.96
PGSC0003DMT400050652	Potato	cytosol	52.15	33.5
Bra031505.1-P	Field mustard	cytosol	47.85	33.04
GSMUA_Achr8P19650_001	Banana	cytosol, mitochondrion	45.32	32.14
PGSC0003DMT400064542	Potato	cytosol	53.42	31.26
Solyc04g072030.1.1	Tomato	cytosol	52.91	30.96
TraesCS4B01G217700.1	Wheat	cytosol	48.1	29.78
Os03t0260000-01	Rice	cytosol	50.13	29.2
Zm00001d028495_P001	Maize	cytosol	49.62	29.08
TraesCS4A01G213700.1	Wheat	cytosol	43.54	29.05
EER95148	Sorghum	cytosol	49.11	28.66
TraesCS4A01G086700.1	Wheat	cytosol	48.1	28.61
TraesCS4D01G098800.1	Wheat	cytosol	48.86	28.22
TraesCS4D01G217900.1	Wheat	cytosol	47.34	28.21
KXG39737	Sorghum	cytosol	46.33	27.98
Os04t0129900-01	Rice	cytosol	48.35	27.92
HORVU4Hr1G061820.3	Barley	plastid	47.85	27.79
PGSC0003DMT400072601	Potato	cytosol	41.52	26.49
PGSC0003DMT400064541	Potato	cytosol	40.76	26.31
Solyc11g069980.1.1	Tomato	cytosol	52.15	25.78
Zm00001d028497_P001	Maize	cytosol	38.23	24.2
PGSC0003DMT400095128	Potato	cytosol	25.06	22.55
PGSC0003DMT400064491	Potato	cytosol	20.76	20.71
Bra031511.1-P	Field mustard	cytosol	28.1	17.96
Bra014507.1-P	Field mustard	cytosol	25.06	15.81
Bra007513.1-P	Field mustard	cytosol	24.56	15.52
Bra016679.1-P	Field mustard	cytosol	23.54	15.15
Bra026801.1-P	Field mustard	cytosol	23.54	15.15
Bra028525.1-P	Field mustard	cytosol	22.28	14.43
Bra025448.1-P	Field mustard	cytosol	21.27	14.41
Bra003469.1-P	Field mustard	cytosol	20.51	14.09
Bra037643.1-P	Field mustard	cytosol	22.03	14.08
Bra034579.1-P	Field mustard	cytosol	27.09	13.26
Bra011458.1-P	Field mustard	cytosol	26.84	13.14
Bra036991.1-P	Field mustard	cytosol	26.33	12.89
Bra038100.1-P	Field mustard	cytosol	16.71	8.05
Bra038229.1-P	Field mustard	cytosol	14.94	7.51
Bra037604.1-P	Field mustard	plastid	14.18	7.27
Bra018449.1-P	Field mustard	cytosol	15.95	6.9
Bra019950.1-P	Field mustard	cytosol	16.2	6.82
Bra017901.1-P	Field mustard	cytosol	15.95	6.67
Bra035433.1-P	Field mustard	cytosol	15.95	6.29
Bra031707.1-P	Field mustard	cytosol	14.43	6.23
KRH11082	Soybean	cytosol	0.76	2.05

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	EnsemblPlantsGene:Bra010250	EnsemblPlants:Bra010250.1	EnsemblPlants:Bra010250.1-P	InterPro:Dynamin_GTPase
InterPro:Dynamin_SF	InterPro:GED	InterPro:GED_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:G_DYNAMIN_dom	InterPro:IPR020850
InterPro:IPR030381	UniProt:M4D1A1	InterPro:P-loop_NTPase	PFAM:PF00350	PFAM:PF02212	PRINTS:PR00195
PFscan:PS51388	PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF135	SMART:SM00053	SMART:SM00302
SUPFAM:SSF52540	UniParc:UPI0002546D18	:	:	:	:

Description

AT1G60530 (E=6e-088) | dynamin family protein

Coordinates

chrA08:+:13423708..13425456

Molecular Weight (calculated)

43640.4 Da

IEP (calculated)

6.079

GRAVY (calculated)

-0.209

Length

395 amino acids

Sequence
(BLAST)

001: MGGSMMSEVC DNNIDAGLSS LAITNNVPIQ APIVSSYNDH IRPLLDTVDR LRNLNVMKEG IQLPTIVVAG DQSSGKSSVL ESLAGISLPR AADKICTRVP
101: LVMRLQRSSS PEPKIWLKYG DKSYSTDEEH ITEDICKATE AIAGTGEGVS DTPLELYVRR QSVPDLTMVD LPGITRNPVK DQPEDIYEQV SAMIKKYIEP
201: QESIILNVLA ATCDFSTSCR RLISKIKEQS VTRVIEMEKL TEYTCNPEYT TVCTQKIAAQ ANFVNAVSSN QSSLTLAGFG TVSITHLRKY PSQLLHQAFD
301: MKVSMTAYWS IVVRRIVDSF TLYLQFTVKN LVNSQFQKEI VGELGGGGDV EKMLDESPSV ACKREKLKNS IKLLKESKEA VAAVLDQNHG QGYRY

Best Arabidopsis Sequence Match ( AT1G60530.1 )
(BLAST)

001: MGGSKMSNDY EIDVEAGMSS LSIVNTPIEA PIVSSYNDRI RPLLDTVDRL RNLNVMREGI QLPTIVVVGD QSSGKSSVLE SLAGINLPRG QGICTRVPLV
101: MRLQRSSSPE PEIWLEYSDK VVPTDEEHVA EAICAATDVI AGTGEGVSDT PLTLSVKKNN VPDLTMVDLP GITRVPVNGQ PENIYEQISR MIMKYIEPQE
201: SIILNVLSAT VDFTTCESIR MSRQVDKTGE RTLAVVTKAD MAPEGLLQKV TADDVSIGLG YICVRNRIGE ETYEEARVQE DLLFRTHPLL SLIDGDIVGI
301: L

Arabidopsis Description

DRP4APutative dynamin-related protein 4A [Source:UniProtKB/Swiss-Prot;Acc:Q9ZP56]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.