Factsheet for TraesCS4A01G086700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G217700.1	Wheat	cytosol	90.21	93.89
TraesCS4D01G217900.1	Wheat	cytosol	80.42	80.54
HORVU4Hr1G061820.3	Barley	plastid	80.57	78.68
Os03t0260000-01	Rice	cytosol	80.27	78.61
KXG39737	Sorghum	cytosol	75.9	77.06
TraesCS4A01G213700.1	Wheat	cytosol	65.21	73.14
Zm00001d028497_P001	Maize	cytosol	68.52	72.92
AT1G60530.1	Thale cress	cytosol	28.92	63.79
CDY36456	Canola	cytosol	16.57	59.14
GSMUA_Achr8P19650_001	Banana	cytosol, mitochondrion	48.04	57.27
CDY53048	Canola	cytosol	42.32	56.2
CDY47217	Canola	cytosol	43.22	55.84
KRH21193	Soybean	cytosol	41.57	55.65
KRH11082	Soybean	cytosol	12.2	55.48
CDY47216	Canola	cytosol	44.58	55.02
Solyc04g072030.1.1	Tomato	cytosol	55.87	54.96
PGSC0003DMT400064542	Potato	cytosol	55.87	54.96
PGSC0003DMT400050652	Potato	cytosol	49.4	53.33
PGSC0003DMT400072601	Potato	cytosol	49.55	53.15
KRH21190	Soybean	cytosol	53.16	53.08
PGSC0003DMT400088564	Potato	cytosol	9.79	52.85
CDY34120	Canola	cytosol	51.81	52.6
CDY24536	Canola	cytosol	51.66	52.45
CDY53046	Canola	cytosol	53.16	52.37
Bra027151.1-P	Field mustard	cytosol	53.16	52.3
Bra031502.1-P	Field mustard	cytosol	51.51	52.29
Bra031505.1-P	Field mustard	cytosol	45.03	52.27
KRH42928	Soybean	cytosol	47.14	52.25
AT1G60500.1	Thale cress	mitochondrion	52.41	52.02
PGSC0003DMT400064541	Potato	cytosol	47.29	51.31
PGSC0003DMT400095128	Potato	cytosol	33.89	51.25
KRH59040	Soybean	cytosol	51.96	51.11
CDY02039	Canola	cytosol, plastid	42.92	50.98
CDY34117	Canola	cytosol	40.21	50.57
CDY03289	Canola	cytosol	40.21	50.57
PGSC0003DMT400065607	Potato	cytosol	14.91	48.29
Bra010250.1-P	Field mustard	cytosol	28.61	48.1
CDY23281	Canola	cytosol	27.86	46.72
PGSC0003DMT400064491	Potato	cytosol	27.11	45.45
Solyc11g069980.1.1	Tomato	cytosol	53.92	44.81
CDY53047	Canola	cytosol	6.02	41.24
PGSC0003DMT400094747	Potato	cytosol	19.88	31.96
Bra031511.1-P	Field mustard	cytosol	24.85	26.7
CDY24530	Canola	cytosol, nucleus, plasma membrane	25.3	26.5
TraesCS1A01G385400.2	Wheat	cytosol, golgi, nucleus, unclear	23.04	25.12
TraesCS4A01G266600.1	Wheat	cytosol	23.04	25.08
TraesCS1A01G213900.2	Wheat	cytosol	21.23	22.56
TraesCS3A01G428000.2	Wheat	cytosol, plastid	25.3	21.0
TraesCS2A01G281000.2	Wheat	cytosol	23.34	20.0
TraesCS5A01G114600.1	Wheat	cytosol	17.02	14.77
TraesCS3A01G273500.1	Wheat	plastid	16.57	13.46
TraesCS6A01G312300.3	Wheat	nucleus	15.81	11.54
TraesCS7A01G198100.1	Wheat	cytosol, nucleus, plasma membrane	15.66	11.52

Protein Annotations

Gene3D:1.20.120.1240	Gene3D:3.40.50.300	MapMan:35.1	ncoils:Coil	InterPro:Dynamin_GTPase	InterPro:Dynamin_SF
InterPro:Dynamin_central	InterPro:GED	InterPro:GED_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:G_DYNAMIN_dom	InterPro:IPR020850
InterPro:IPR030381	InterPro:P-loop_NTPase	PFAM:PF00350	PFAM:PF01031	PFAM:PF02212	PRINTS:PR00195
PFscan:PS51388	PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF135	SMART:SM00053	SUPFAM:SSF52540
EnsemblPlantsGene:TraesCS4A01G086700	EnsemblPlants:TraesCS4A01G086700.1	TIGR:cd08771	SEG:seg	:	:

Description

No Description!

Coordinates

chr4A:+:90878561..90885916

Molecular Weight (calculated)

73504.2 Da

IEP (calculated)

6.271

GRAVY (calculated)

-0.111

Length

664 amino acids

Sequence
(BLAST)

001: MPSSKKNKAS DSSKNLQMVI SDGKGEAAAS AVTGSAIAAS YNDQIRPLLD AVDRLRHLKV TQEGIQLPTI VVVGDQSSGK SSVLESLAGI SLPRGQGICT
101: RVPLVMRLQD DPSADSPVLQ LEHINGRVVT TTEANIAGSG KGISDAPITL VVRKRGVPDL TLVDLPGITR VPVKGQPDDI YDQIAKIIKD YISPKESIIL
201: NVLSATVDFP TCESIRMSQQ VDRTGERTLA VVTKVDKSPE GLLEKVTMDD VNIGLGYVCV RNRIGDETYD QARVEEEKLF KYHHLLSKIE KSMVGIPVLA
301: QRLMQIQATI IAKCLPGIVK QINDRLSRSS TELNQMPPDL VSVADAVREF IRIVKQVCSS LEKILVRGEF DEFPDDCHFH GTARIAEMLN AYAKKLPVEV
401: PGRGGLFLME EVRVLEETKG VNLPNFLPRS AFQRVVLVPQ NLLSYTHDLV NEVWEYVEDL VSKVVLQHAD NFPQVQSSCR RAVQMLMEKA RARSAQHIEE
501: LMEMELVADF TANPEYMKTW YEIMESHEKF MDAVVDTSKS TLLNLVGFGE VDVSHLRVNS ELAGQAFDLS ARVTAYWKII VLRLIDGLAL HVLRGVKRLV
601: ESELERELSD ELLGNKLAGV ERMLMPSPGS GTKRERLKKS IVLLRQSKEV VANIMDRISA SGEI

Best Arabidopsis Sequence Match ( AT1G60500.1 )
(BLAST)

001: MVKKKVATKK NSPSLAIAKK KSRSNKDVVS VEAPIISSYN DRIRPLLDTV DRLRNLNVMR EGIHLPTIVV VGDQSSGKSS VLESLAGISL PRGQGICTRV
101: PLVMRLQRSS SPEPEIWLEY NDKVVPTDEE HIAEAIRAAT DVIAGSGKGV SDAPLTLHVK KAGVPDLTMV DLPGITRVPV NGQPENIYEQ ISGMIMEYIE
201: PQESIILNVL SATVDFTTCE SIRMSRKVDK TGQRTLAVVT KADMAPEGLL QKVTADDVSI VLGYVCVRNR IGEETYEEAR MQEELLFRTH PVLSLIDEDI
301: VGIPVLAQKL MLIQSSMIAR CLPKIVSKIN QKLDTAVLEL NKLPMVMAST GEALMALMDI IGSAKESLLR ILVQGDFSEY PDDQNMHCTA RLADMLSQFS
401: DSLQAKPKEV AEFLMDEIKI LDECKCVGLP NFIPRSAFLA ILSQHVDGIQ DKPVEFINKI WDYIEDVLSS VTAKRSDNFP QIQSSIKRAG RNLISKIKEQ
501: SVNRVMEIVE MEKLTDYTCN PEYMTSWTQK TSAQESFIDA VVKNENIPDY FSVTGFGNVK ISHLRKYHAH LLIPAFDMKM RITSYWKIVL RRIVDNLALY
601: LQLSVKSLVN TRFQKEIVAE MVDPRDGGGV EKMLEESPLV ASKREKLQNS IKLLKESKDA VAAIVDQNC

Arabidopsis Description

DRP4CDynamin-related protein 4C [Source:UniProtKB/Swiss-Prot;Acc:Q9ZP55]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.