CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH11082	Soybean	cytosol	21.98	74.66
KRH21190	Soybean	cytosol	85.69	63.91
PGSC0003DMT400088564	Potato	cytosol	15.73	63.41
KRH42928	Soybean	cytosol	62.9	52.09
KRH59040	Soybean	cytosol	70.77	52.0
PGSC0003DMT400050652	Potato	cytosol	58.67	47.32
Solyc04g072030.1.1	Tomato	cytosol	64.31	47.26
PGSC0003DMT400064542	Potato	cytosol	64.11	47.11
TraesCS4D01G217900.1	Wheat	cytosol	58.27	43.59
PGSC0003DMT400064541	Potato	cytosol	53.43	43.3
Os03t0260000-01	Rice	cytosol	58.67	42.92
KXG39737	Sorghum	cytosol	56.45	42.81
HORVU4Hr1G061820.3	Barley	plastid	58.67	42.79
TraesCS4B01G217700.1	Wheat	cytosol	54.84	42.63
PGSC0003DMT400072601	Potato	cytosol	52.82	42.33
Zm00001d028495_P001	Maize	cytosol	56.85	41.84
Os04t0129900-01	Rice	cytosol	57.66	41.81
EER95148	Sorghum	cytosol	56.85	41.65
TraesCS4A01G086700.1	Wheat	cytosol	55.65	41.57
GSMUA_Achr8P19650_001	Banana	cytosol, mitochondrion	45.56	40.57
TraesCS4A01G213700.1	Wheat	cytosol	47.98	40.2
TraesCS4D01G098800.1	Wheat	cytosol	54.44	39.47
Solyc11g069980.1.1	Tomato	cytosol	62.1	38.55
PGSC0003DMT400095128	Potato	cytosol	33.67	38.04
Zm00001d028497_P001	Maize	cytosol	47.38	37.66
PGSC0003DMT400064491	Potato	cytosol	23.39	29.29
KRH41321	Soybean	endoplasmic reticulum, nucleus	25.6	20.82
KRH60047	Soybean	endoplasmic reticulum	25.4	20.66
KRH70357	Soybean	endoplasmic reticulum, nucleus	25.6	20.55
KRH77654	Soybean	endoplasmic reticulum	25.2	20.49
KRH41722	Soybean	endoplasmic reticulum, nucleus	25.4	20.42
KRH49665	Soybean	endoplasmic reticulum	25.4	20.39
KRH60421	Soybean	endoplasmic reticulum	25.2	20.26
KRH04285	Soybean	cytosol	24.8	20.1
KRH27831	Soybean	cytosol, endoplasmic reticulum, nucleus	24.6	20.0
KRH46533	Soybean	cytosol, endoplasmic reticulum, nucleus	24.8	19.97
KRH48908	Soybean	cytosol, nucleus	24.8	19.9
KRH47905	Soybean	cytosol, endoplasmic reticulum	24.4	19.87
KRH66384	Soybean	cytosol, endoplasmic reticulum	24.6	19.74
KRH10618	Soybean	plastid	28.23	17.01
KRH42074	Soybean	endoplasmic reticulum, nucleus	27.82	16.95
KRH21736	Soybean	nucleus	28.02	16.83
KRH62781	Soybean	nucleus	27.62	16.77
KRH49844	Soybean	plastid	27.22	16.63
KRH06461	Soybean	cytosol	16.53	15.8
KRH42202	Soybean	nucleus	16.53	10.92
KRH55251	Soybean	plastid	16.94	10.57
KRH26094	Soybean	plastid	16.73	10.32
KRH01870	Soybean	endoplasmic reticulum	16.73	9.08
KRH51295	Soybean	endoplasmic reticulum	16.33	8.86
KRH27552	Soybean	cytosol	15.73	8.46
KRH36411	Soybean	endoplasmic reticulum, nucleus	15.73	8.46
KRH58326	Soybean	plasma membrane	3.63	3.61

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A0R0H0V0	EMBL:ACUP02008344	InterPro:Dynamin_GTPase	InterPro:Dynamin_SF
InterPro:Dynamin_central	InterPro:GED	InterPro:GED_dom	EnsemblPlantsGene:GLYMA_13G224600	GO:GO:0000166	GO:GO:0000266
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005515	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008017	GO:GO:0008150
GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	InterPro:G_DYNAMIN_dom	InterPro:IPR020850	InterPro:IPR030381
EnsemblPlants:KRH21193	ProteinID:KRH21193	ProteinID:KRH21193.1	InterPro:P-loop_NTPase	PFAM:PF00350	PFAM:PF01031
PFAM:PF02212	PRINTS:PR00195	PFscan:PS51388	PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF135
SMART:SM00053	SUPFAM:SSF52540	UniParc:UPI0006ED92D4	:	:	:

Description

hypothetical protein

Coordinates

chr13:-:33735984..33741877

Molecular Weight (calculated)

54609.3 Da

IEP (calculated)

8.723

GRAVY (calculated)

-0.109

Length

496 amino acids

Sequence
(BLAST)

001: NALGSSTASR ANEVTRPDRS WQLLHLRLIF SAKHVAPIVS SYNERIRPVL DAVWCHTVEN LRRLNITKEG IQLPTIVVVG DQSSGKSSVL ESLAGISLPR
101: GQGICTRVPL IMRLQNHSLP KPELVLEYNA KIVSTDEAQV SDAIRVATDE LAGGGKGISN TPLTLVVKKD GVPDLTMVDL PGITRVPVHG QPEDIYDQIK
201: DIIMEYIRPE ESIILNVLSA TVDFSTCESI RMSQGVDKTG ERTLAVVTKA DKAPEGLHEK VTADDVNIGL GYVCVRNRIG DESYEDARAE EANLFRTHTL
301: LSKIDKPIVG VPVLAQKLVQ LQAASISKIL PEIVKKINDK LGSQLSELDK FPRKLTYGAN AMSAFMHIIG LAKESLSKIL LSGEFDEYPD DKHICTVPLL
401: SSLTRLTAYW KIVLRRLIDS TALHLQFRIF NPVKKDVGYE IVKDVMSQCG GGIQRLLKES PSVALNRDKL NRSIKVLRES KKVVASITDK VSSYGN

Best Arabidopsis Sequence Match ( AT1G60500.1 )
(BLAST)

001: MVKKKVATKK NSPSLAIAKK KSRSNKDVVS VEAPIISSYN DRIRPLLDTV DRLRNLNVMR EGIHLPTIVV VGDQSSGKSS VLESLAGISL PRGQGICTRV
101: PLVMRLQRSS SPEPEIWLEY NDKVVPTDEE HIAEAIRAAT DVIAGSGKGV SDAPLTLHVK KAGVPDLTMV DLPGITRVPV NGQPENIYEQ ISGMIMEYIE
201: PQESIILNVL SATVDFTTCE SIRMSRKVDK TGQRTLAVVT KADMAPEGLL QKVTADDVSI VLGYVCVRNR IGEETYEEAR MQEELLFRTH PVLSLIDEDI
301: VGIPVLAQKL MLIQSSMIAR CLPKIVSKIN QKLDTAVLEL NKLPMVMAST GEALMALMDI IGSAKESLLR ILVQGDFSEY PDDQNMHCTA RLADMLSQFS
401: DSLQAKPKEV AEFLMDEIKI LDECKCVGLP NFIPRSAFLA ILSQHVDGIQ DKPVEFINKI WDYIEDVLSS VTAKRSDNFP QIQSSIKRAG RNLISKIKEQ
501: SVNRVMEIVE MEKLTDYTCN PEYMTSWTQK TSAQESFIDA VVKNENIPDY FSVTGFGNVK ISHLRKYHAH LLIPAFDMKM RITSYWKIVL RRIVDNLALY
601: LQLSVKSLVN TRFQKEIVAE MVDPRDGGGV EKMLEESPLV ASKREKLQNS IKLLKESKDA VAAIVDQNC

Arabidopsis Description

DRP4CDynamin-related protein 4C [Source:UniProtKB/Swiss-Prot;Acc:Q9ZP55]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.