Factsheet for TraesCS4A01G213700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G098800.1	Wheat	cytosol	92.4	79.97
TraesCS4A01G086700.1	Wheat	cytosol	73.14	65.21
AT1G60530.1	Thale cress	cytosol	30.41	59.8
CDY36456	Canola	cytosol	18.07	57.53
GSMUA_Achr8P19650_001	Banana	cytosol, mitochondrion	48.99	52.06
CDY47217	Canola	cytosol	44.76	51.56
CDY53048	Canola	cytosol	43.41	51.4
PGSC0003DMT400088564	Potato	cytosol	10.64	51.22
CDY47216	Canola	cytosol	45.78	50.37
KRH21193	Soybean	cytosol	40.2	47.98
Bra031505.1-P	Field mustard	cytosol	45.44	47.03
PGSC0003DMT400064542	Potato	cytosol	53.21	46.67
Solyc04g072030.1.1	Tomato	cytosol	53.04	46.52
KRH42928	Soybean	cytosol	46.96	46.41
CDY34120	Canola	cytosol	51.18	46.33
KRH21190	Soybean	cytosol	52.03	46.32
CDY24536	Canola	cytosol	51.01	46.18
Bra031502.1-P	Field mustard	cytosol	50.84	46.02
PGSC0003DMT400065607	Potato	cytosol	15.88	45.85
CDY53046	Canola	cytosol	52.03	45.7
KRH59040	Soybean	cytosol	51.86	45.48
PGSC0003DMT400050652	Potato	cytosol	47.13	45.37
AT1G60500.1	Thale cress	mitochondrion	51.01	45.14
Bra027151.1-P	Field mustard	cytosol	51.18	44.89
CDY02039	Canola	cytosol, plastid	42.06	44.54
PGSC0003DMT400072601	Potato	cytosol	46.28	44.26
KRH11082	Soybean	cytosol	10.81	43.84
Bra010250.1-P	Field mustard	cytosol	29.05	43.54
PGSC0003DMT400064541	Potato	cytosol	44.26	42.81
CDY34117	Canola	cytosol	37.84	42.42
CDY03289	Canola	cytosol	37.84	42.42
CDY23281	Canola	cytosol	28.21	42.17
PGSC0003DMT400095128	Potato	cytosol	31.25	42.14
Solyc11g069980.1.1	Tomato	cytosol	52.7	39.05
PGSC0003DMT400064491	Potato	cytosol	23.99	35.86
PGSC0003DMT400094747	Potato	cytosol	19.26	27.6
CDY53047	Canola	cytosol	4.05	24.74
TraesCS1A01G385400.2	Wheat	cytosol, golgi, nucleus, unclear	23.99	23.32
TraesCS4A01G266600.1	Wheat	cytosol	23.99	23.28
CDY24530	Canola	cytosol, nucleus, plasma membrane	23.65	22.08
Bra031511.1-P	Field mustard	cytosol	22.97	22.01
TraesCS1A01G213900.2	Wheat	cytosol	22.8	21.6
TraesCS3A01G428000.2	Wheat	cytosol, plastid	26.35	19.5
TraesCS2A01G281000.2	Wheat	cytosol	23.65	18.06
TraesCS5A01G114600.1	Wheat	cytosol	18.75	14.51
TraesCS3A01G273500.1	Wheat	plastid	17.74	12.85
TraesCS6A01G312300.3	Wheat	nucleus	17.23	11.21
TraesCS7A01G198100.1	Wheat	cytosol, nucleus, plasma membrane	16.89	11.07

Protein Annotations

Gene3D:1.20.120.1240	Gene3D:3.40.50.300	MapMan:35.1	InterPro:Dynamin_GTPase	InterPro:Dynamin_SF	InterPro:Dynamin_central
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525
GO:GO:0016787	InterPro:G_DYNAMIN_dom	InterPro:IPR030381	InterPro:P-loop_NTPase	PFAM:PF00350	PFAM:PF01031
PRINTS:PR00195	PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF135	SMART:SM00053	SUPFAM:SSF52540
EnsemblPlantsGene:TraesCS4A01G213700	EnsemblPlants:TraesCS4A01G213700.1	TIGR:cd08771	SEG:seg	:	:

Description

No Description!

Coordinates

chr4A:-:511824039..511826026

Molecular Weight (calculated)

65260.0 Da

IEP (calculated)

6.987

GRAVY (calculated)

-0.212

Length

592 amino acids

Sequence
(BLAST)

001: MAKPKAKRLK SSPNDAAAAD GVAASAIASS YNDHIRPLLD AVDRLRHLNV TQEGIQLPTI VVVGDQSSGK SSVLESLAGI SLPRGQGICT RAPLVMRLKG
101: DPSGGDAPVL QLEYGAGRVV STSEAEIAGS GKGISDRPIT LFVRKRGLPD LTLVDLPGIT RVPVKGQPDD IYEQVAGIIQ EYIAPKESII LNVLSATVDF
201: PTCESIRMSQ QVDRNGDRTL AVVTKQVTMD DVNIGLGYVC VRNRVGDETH DQARAEEERL FDHHPLLSRI DKSMVGIAVL VQRLMQIQAT IIAKCLPDIV
301: SSTAELEQMP PDLNNVADAV RAFFHIVKRT CSSVEKMLVR GEFEECPDDR HFHGTARIAE MLNAYAKKLP AECPEHGSYL FLMEEVRILE ETTAIKLPDF
401: LPRSAFLVLL KKKVQTVVQG PHDLVREVWD YVEDLTLKVL LQHSTDFPQV QPSCRRAVQS MMDKARAQSA RHVTELIDME LVADYTYNPD YSKLMEGYGK
501: FMEAVKDRTK PTAVTLKGFG KVERLAENDL EVALSDELLG NKMTGVERML APSPGTGSKR QRLKKSIVLL QQSKEAVAYI MGKKLYETRS HG

Best Arabidopsis Sequence Match ( AT1G60500.1 )
(BLAST)

001: MVKKKVATKK NSPSLAIAKK KSRSNKDVVS VEAPIISSYN DRIRPLLDTV DRLRNLNVMR EGIHLPTIVV VGDQSSGKSS VLESLAGISL PRGQGICTRV
101: PLVMRLQRSS SPEPEIWLEY NDKVVPTDEE HIAEAIRAAT DVIAGSGKGV SDAPLTLHVK KAGVPDLTMV DLPGITRVPV NGQPENIYEQ ISGMIMEYIE
201: PQESIILNVL SATVDFTTCE SIRMSRKVDK TGQRTLAVVT KADMAPEGLL QKVTADDVSI VLGYVCVRNR IGEETYEEAR MQEELLFRTH PVLSLIDEDI
301: VGIPVLAQKL MLIQSSMIAR CLPKIVSKIN QKLDTAVLEL NKLPMVMAST GEALMALMDI IGSAKESLLR ILVQGDFSEY PDDQNMHCTA RLADMLSQFS
401: DSLQAKPKEV AEFLMDEIKI LDECKCVGLP NFIPRSAFLA ILSQHVDGIQ DKPVEFINKI WDYIEDVLSS VTAKRSDNFP QIQSSIKRAG RNLISKIKEQ
501: SVNRVMEIVE MEKLTDYTCN PEYMTSWTQK TSAQESFIDA VVKNENIPDY FSVTGFGNVK ISHLRKYHAH LLIPAFDMKM RITSYWKIVL RRIVDNLALY
601: LQLSVKSLVN TRFQKEIVAE MVDPRDGGGV EKMLEESPLV ASKREKLQNS IKLLKESKDA VAAIVDQNC

Arabidopsis Description

DRP4CDynamin-related protein 4C [Source:UniProtKB/Swiss-Prot;Acc:Q9ZP55]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.