Factsheet for Solyc11g069980.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400050652	Potato	cytosol	70.46	91.54
Solyc04g072030.1.1	Tomato	cytosol	61.2	72.44
AT1G60530.1	Thale cress	cytosol	25.28	67.11
KRH21193	Soybean	cytosol	38.55	62.1
CDY47217	Canola	cytosol	39.17	60.89
KRH42928	Soybean	cytosol	45.43	60.6
KRH59040	Soybean	cytosol	50.56	59.85
KRH21190	Soybean	cytosol	49.56	59.55
CDY47216	Canola	cytosol	39.92	59.29
CDY53048	Canola	cytosol	36.92	59.0
GSMUA_Achr8P19650_001	Banana	cytosol, mitochondrion	39.42	56.55
CDY36456	Canola	cytosol	13.14	56.45
Bra027151.1-P	Field mustard	cytosol	47.68	56.44
KRH11082	Soybean	cytosol	10.26	56.16
TraesCS4D01G217900.1	Wheat	cytosol	46.31	55.81
CDY53046	Canola	cytosol	46.81	55.49
TraesCS4B01G217700.1	Wheat	cytosol	44.18	55.33
CDY02039	Canola	cytosol, plastid	38.55	55.1
KXG39737	Sorghum	cytosol	45.06	55.05
Zm00001d028495_P001	Maize	cytosol	46.18	54.75
AT1G60500.1	Thale cress	mitochondrion	45.81	54.71
EER95148	Sorghum	cytosol	46.18	54.51
CDY34120	Canola	cytosol	44.56	54.43
HORVU4Hr1G061820.3	Barley	plastid	46.18	54.26
Bra031505.1-P	Field mustard	cytosol	38.8	54.2
CDY24536	Canola	cytosol	44.18	53.98
Bra031502.1-P	Field mustard	cytosol	44.18	53.98
TraesCS4A01G086700.1	Wheat	cytosol	44.81	53.92
Os03t0260000-01	Rice	cytosol	45.43	53.54
TraesCS4A01G213700.1	Wheat	cytosol	39.05	52.7
CDY53047	Canola	cytosol	6.38	52.58
Bra010250.1-P	Field mustard	cytosol	25.78	52.15
Os04t0129900-01	Rice	cytosol	44.31	51.75
TraesCS4D01G098800.1	Wheat	cytosol	44.06	51.46
CDY03289	Canola	cytosol	33.92	51.33
CDY34117	Canola	cytosol	33.92	51.33
CDY23281	Canola	cytosol	25.28	51.01
Zm00001d028497_P001	Maize	cytosol	39.3	50.32
Solyc11g070010.1.1	Tomato	cytosol	21.28	43.26
Solyc11g043170.1.1	Tomato	cytosol	6.38	31.29
Solyc11g043200.1.1	Tomato	cytosol, nucleus	8.51	29.69
Bra031511.1-P	Field mustard	cytosol	20.15	26.05
CDY24530	Canola	cytosol, nucleus, plasma membrane	20.53	25.87
Solyc05g050600.2.1	Tomato	nucleus, plastid	18.52	24.3
Solyc08g077360.2.1	Tomato	plastid	18.52	24.26
Solyc01g095970.2.1	Tomato	plastid	18.02	23.61
Solyc01g005310.2.1	Tomato	plastid	18.15	23.31
Solyc10g062160.1.1	Tomato	plastid	16.77	22.91
Solyc01g088510.2.1	Tomato	nucleus	13.27	20.7
Solyc08g006600.2.1	Tomato	plastid	19.52	20.66
Solyc01g106050.2.1	Tomato	plastid	21.15	20.56
Solyc01g103130.1.1	Tomato	nucleus, unclear	10.89	14.33
Solyc10g047050.1.1	Tomato	nucleus	13.02	13.49
Solyc11g043210.1.1	Tomato	nucleus	9.01	13.07
Solyc07g063080.2.1	Tomato	plastid	12.89	12.42
Solyc11g039650.1.1	Tomato	cytosol, nucleus, plastid	13.64	11.86
Solyc01g103120.2.1	Tomato	cytosol	2.13	5.76

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	InterPro:Dynamin_GTPase	InterPro:Dynamin_SF	InterPro:Dynamin_central	InterPro:GED
InterPro:GED_dom	GO:GO:0000166	GO:GO:0000266	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005515	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787
InterPro:G_DYNAMIN_dom	InterPro:IPR020850	InterPro:IPR030381	UniProt:K4DAF4	InterPro:P-loop_NTPase	PFAM:PF00350
PFAM:PF01031	PFAM:PF02212	PRINTS:PR00195	PFscan:PS51388	PFscan:PS51718	PANTHER:PTHR11566
PANTHER:PTHR11566:SF135	SMART:SM00053	SMART:SM00302	SUPFAM:SSF52540	EnsemblPlantsGene:Solyc11g069980.1	EnsemblPlants:Solyc11g069980.1.1
UniParc:UPI0002769545	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr11:+:54574400..54577231

Molecular Weight (calculated)

89557.4 Da

IEP (calculated)

6.628

GRAVY (calculated)

-0.119

Length

799 amino acids

Sequence
(BLAST)

001: MHITNNDSAS STSECDLQVV DQKHLALIEP HGSCVPAPIV SSFNDRIRPL LDCVDKLRHL NIMQEGIQLP TIVVVGDQSS GKSSVLESLA GISLPRGQGI
101: CTRVPLIMRL QNHNETELHL EYNGKLVPTD EVNIAEAIVL ATNEIAGHGK GISNIPLSLI VKKNGVPDLT MVDLPGITRV PVHGQPEDIF EQISDIIMKY
201: ITPEESIILN VLSATVDFPT CESIRMSQKV DKTGERTIAV VTKVDKAPEG LLEKVTSNDV NIGLGYVCVK NRTGNKSYDE ARSEEARLFQ THALLSKIDK
301: SMVSVPVLAH KLVHIQANII CKCLPDIVKK INDKLAVNVA SLNKLPQHLS SVAEALTMFM RILSSTKESL KKIFLRGEFD EYAEDLEMHC TARLAEMLNE
401: YAVELHSKNV EKKEDFLMDE IMSLKEANGI GLPNFLPRAV FLNVLQKKVS VISAIPEVFV EKLWNYIETV VIKVLMHHFG DYQQLRSSTR CAVQNLIAKR
501: KDESINWVRE IIETERLTDY TYNPEYVATC STLMEQQKPF MEIMNDSDKP SIIKLKEIGE VDVGSLRMNK DIAQQAFELK MRMIAYWKIV LMRMVDHMAL
601: YAMFSLRKMV NYEIEQEIVN ELMASHGGGI ERMLEESPCV SEKRLRLKRS VKLLKESKDV VAKIMDRIAL QTYGEKMVNG SSSSEYPLQV YEPKHIAVIK
701: PKVSGVHAPI ISSLNDRTRP LLDCVDKLRH LNIMQEGTQL PTIMAVRDQS FGKSSVIESL PGTSLPRGND TCTRVPLITR LQGVQVEAPT YVEPCIQSL

Best Arabidopsis Sequence Match ( AT1G60500.1 )
(BLAST)

001: MVKKKVATKK NSPSLAIAKK KSRSNKDVVS VEAPIISSYN DRIRPLLDTV DRLRNLNVMR EGIHLPTIVV VGDQSSGKSS VLESLAGISL PRGQGICTRV
101: PLVMRLQRSS SPEPEIWLEY NDKVVPTDEE HIAEAIRAAT DVIAGSGKGV SDAPLTLHVK KAGVPDLTMV DLPGITRVPV NGQPENIYEQ ISGMIMEYIE
201: PQESIILNVL SATVDFTTCE SIRMSRKVDK TGQRTLAVVT KADMAPEGLL QKVTADDVSI VLGYVCVRNR IGEETYEEAR MQEELLFRTH PVLSLIDEDI
301: VGIPVLAQKL MLIQSSMIAR CLPKIVSKIN QKLDTAVLEL NKLPMVMAST GEALMALMDI IGSAKESLLR ILVQGDFSEY PDDQNMHCTA RLADMLSQFS
401: DSLQAKPKEV AEFLMDEIKI LDECKCVGLP NFIPRSAFLA ILSQHVDGIQ DKPVEFINKI WDYIEDVLSS VTAKRSDNFP QIQSSIKRAG RNLISKIKEQ
501: SVNRVMEIVE MEKLTDYTCN PEYMTSWTQK TSAQESFIDA VVKNENIPDY FSVTGFGNVK ISHLRKYHAH LLIPAFDMKM RITSYWKIVL RRIVDNLALY
601: LQLSVKSLVN TRFQKEIVAE MVDPRDGGGV EKMLEESPLV ASKREKLQNS IKLLKESKDA VAAIVDQNC

Arabidopsis Description

DRP4CDynamin-related protein 4C [Source:UniProtKB/Swiss-Prot;Acc:Q9ZP55]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.