Factsheet for Os03t0260000-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G217900.1	Wheat	cytosol	83.19	85.07
TraesCS4B01G217700.1	Wheat	cytosol	78.47	83.39
HORVU4Hr1G061820.3	Barley	plastid	82.74	82.5
KXG39737	Sorghum	cytosol	79.06	81.96
TraesCS4A01G086700.1	Wheat	cytosol	78.61	80.27
Zm00001d028497_P001	Maize	cytosol	71.98	78.21
Os04t0129900-01	Rice	cytosol	70.35	69.74
AT1G60530.1	Thale cress	cytosol	30.09	67.77
GSMUA_Achr8P19650_001	Banana	cytosol, mitochondrion	50.59	61.58
CDY36456	Canola	cytosol	16.52	60.22
PGSC0003DMT400088564	Potato	cytosol	10.77	59.35
KRH21193	Soybean	cytosol	42.92	58.67
KRH11082	Soybean	cytosol	12.54	58.22
CDY47217	Canola	cytosol	43.95	57.98
CDY53048	Canola	cytosol	42.63	57.8
Solyc04g072030.1.1	Tomato	cytosol	57.52	57.78
PGSC0003DMT400064542	Potato	cytosol	57.37	57.63
CDY47216	Canola	cytosol	45.72	57.62
KRH21190	Soybean	cytosol	55.9	56.99
KRH42928	Soybean	cytosol	49.7	56.26
Bra031505.1-P	Field mustard	cytosol	46.76	55.42
CDY34120	Canola	cytosol	53.39	55.35
CDY24536	Canola	cytosol	53.24	55.2
PGSC0003DMT400072601	Potato	cytosol	50.3	55.09
Bra031502.1-P	Field mustard	cytosol	53.1	55.05
CDY53046	Canola	cytosol	54.42	54.75
PGSC0003DMT400064541	Potato	cytosol	49.26	54.58
KRH59040	Soybean	cytosol	54.28	54.52
AT1G60500.1	Thale cress	mitochondrion	53.54	54.26
Bra027151.1-P	Field mustard	cytosol	53.98	54.22
PGSC0003DMT400050652	Potato	cytosol	48.67	53.66
PGSC0003DMT400095128	Potato	cytosol	34.22	52.85
PGSC0003DMT400065607	Potato	cytosol	15.93	52.68
CDY34117	Canola	cytosol	40.71	52.27
CDY03289	Canola	cytosol	40.71	52.27
CDY02039	Canola	cytosol, plastid	42.18	51.16
Bra010250.1-P	Field mustard	cytosol	29.2	50.13
CDY23281	Canola	cytosol	28.47	48.74
PGSC0003DMT400064491	Potato	cytosol	27.73	47.47
Solyc11g069980.1.1	Tomato	cytosol	53.54	45.43
CDY53047	Canola	cytosol	6.05	42.27
Os01t0681100-01	Rice	cytosol, plasma membrane	10.62	39.13
PGSC0003DMT400094747	Potato	cytosol	19.91	32.69
Bra031511.1-P	Field mustard	cytosol	25.66	28.16
CDY24530	Canola	cytosol, nucleus, plasma membrane	26.11	27.92
Os05t0556100-01	Rice	plasma membrane	23.75	26.44
Os03t0713100-01	Rice	plasma membrane	23.75	26.35
Os10t0567800-01	Rice	plasma membrane	23.16	25.4
Os09t0572900-01	Rice	cytosol, plasma membrane	23.01	24.92
Os01t0920400-01	Rice	nucleus, plastid	25.66	21.27
Os04t0381000-01	Rice	cytosol	23.3	19.46
Os12t0178700-01	Rice	cytosol	12.83	15.56
Os01t0748000-00	Rice	plastid	17.7	14.6
Os08t0425100-01	Rice	plasma membrane	15.34	13.58
Os02t0738900-01	Rice	plasma membrane	16.96	12.46
Os06t0247800-01	Rice	plasma membrane	16.67	12.4

Protein Annotations

Gene3D:1.20.120.1240	Gene3D:3.40.50.300	MapMan:35.1	EntrezGene:4332316	ProteinID:ABF95077.1	ProteinID:BAF11531.1
ProteinID:BAS83351.1	InterPro:Dynamin_GTPase	InterPro:Dynamin_SF	InterPro:Dynamin_central	ProteinID:EAZ26329.1	InterPro:GED
InterPro:GED_dom	GO:GO:0000166	GO:GO:0000266	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005515	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787
InterPro:G_DYNAMIN_dom	InterPro:IPR020850	InterPro:IPR030381	EnsemblPlantsGene:Os03g0260000	EnsemblPlants:Os03t0260000-01	InterPro:P-loop_NTPase
PFAM:PF00350	PFAM:PF01031	PFAM:PF02212	PRINTS:PR00195	PFscan:PS51388	PFscan:PS51718
PANTHER:PTHR11566	PANTHER:PTHR11566:SF135	UniProt:Q10NS9	SMART:SM00053	SUPFAM:SSF52540	UniParc:UPI0000DB4586
RefSeq:XP_015630245.1	SEG:seg	:	:	:	:

Description

Dynamin family protein. (Os03t0260000-01)

Coordinates

chr3:+:8434789..8437195

Molecular Weight (calculated)

75075.0 Da

IEP (calculated)

6.262

GRAVY (calculated)

-0.151

Length

678 amino acids

Sequence
(BLAST)

001: MSKKLLPIMA TKSAKDLVGD SKALVAASDV VTSSAIAESY NDQIRPLLDA VDRLRHLKVT QEGIQLPTIV VVGDQSSGKS SVLESLAGIS LPRGQGICTR
101: VPLVMRLQDD PSADSPKLQL EYSNGRVVTT SEAKVADAIN AATAEIAGSG KGISDAPITL VVRKRGVPDL TLVDLPGITR VPVQGQPDDI YDQIAKIIKE
201: YIAPKESIIL NVLSATVDFP TCESIRMSQQ VDRTGERTLA VVTKADKAPE GLLEKVTMDD VNIGLGYVCV RNRIGEETYD QARIEEERLF KYHPLLSKID
301: KSMVGIPVLA QRLMQIQATI IAKCLPDIVK QINDRLSRHS SELDQMPPDL NNVADAVRAF FHIVKQVCAS LEKVLVRGEF DEFPDDRHFH GTARIAEKMD
401: GYKRRLPAEC PKSSDDDAMF LMEEVRVLEE TKGINLPNFL PRSAFLVLLK KKVETVMHVP HELVNEVWGY VEDVVMNILL KHSENFPQVQ PSCRRAVQTL
501: MDKARARSAQ HVKELIEMEL VSDYTANPDY MRTWTEIMEG HDSFMEAVED GSKPARITLE GFGEVDVSHL RAHAGLAGQA FDLRARLTAY WRSIVLRLVD
601: GLALHVLRVV KRLVEHDLEA ELADELLGNK MAGVERMLAP SPSTGAKRER LKKSIVLLRQ SKEVVANIMD RISAAGEV

Best Arabidopsis Sequence Match ( AT1G60500.1 )
(BLAST)

001: MVKKKVATKK NSPSLAIAKK KSRSNKDVVS VEAPIISSYN DRIRPLLDTV DRLRNLNVMR EGIHLPTIVV VGDQSSGKSS VLESLAGISL PRGQGICTRV
101: PLVMRLQRSS SPEPEIWLEY NDKVVPTDEE HIAEAIRAAT DVIAGSGKGV SDAPLTLHVK KAGVPDLTMV DLPGITRVPV NGQPENIYEQ ISGMIMEYIE
201: PQESIILNVL SATVDFTTCE SIRMSRKVDK TGQRTLAVVT KADMAPEGLL QKVTADDVSI VLGYVCVRNR IGEETYEEAR MQEELLFRTH PVLSLIDEDI
301: VGIPVLAQKL MLIQSSMIAR CLPKIVSKIN QKLDTAVLEL NKLPMVMAST GEALMALMDI IGSAKESLLR ILVQGDFSEY PDDQNMHCTA RLADMLSQFS
401: DSLQAKPKEV AEFLMDEIKI LDECKCVGLP NFIPRSAFLA ILSQHVDGIQ DKPVEFINKI WDYIEDVLSS VTAKRSDNFP QIQSSIKRAG RNLISKIKEQ
501: SVNRVMEIVE MEKLTDYTCN PEYMTSWTQK TSAQESFIDA VVKNENIPDY FSVTGFGNVK ISHLRKYHAH LLIPAFDMKM RITSYWKIVL RRIVDNLALY
601: LQLSVKSLVN TRFQKEIVAE MVDPRDGGGV EKMLEESPLV ASKREKLQNS IKLLKESKDA VAAIVDQNC

Arabidopsis Description

DRP4CDynamin-related protein 4C [Source:UniProtKB/Swiss-Prot;Acc:Q9ZP55]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.