Factsheet for Bra027151.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53048	Canola	cytosol	72.15	97.4
AT1G60500.1	Thale cress	mitochondrion	81.93	82.66
Bra031502.1-P	Field mustard	cytosol	75.85	78.29
Bra031505.1-P	Field mustard	cytosol	66.22	78.15
Bra010250.1-P	Field mustard	cytosol	38.96	66.58
PGSC0003DMT400088564	Potato	cytosol	11.11	60.98
Solyc04g072030.1.1	Tomato	cytosol	58.67	58.67
PGSC0003DMT400064542	Potato	cytosol	58.52	58.52
PGSC0003DMT400050652	Potato	cytosol	51.7	56.75
PGSC0003DMT400064541	Potato	cytosol	50.07	55.23
PGSC0003DMT400072601	Potato	cytosol	50.07	54.6
TraesCS4B01G217700.1	Wheat	cytosol	51.26	54.23
PGSC0003DMT400095128	Potato	cytosol	35.26	54.21
KRH11082	Soybean	cytosol	11.7	54.11
Os03t0260000-01	Rice	cytosol	54.22	53.98
Zm00001d028495_P001	Maize	cytosol	53.78	53.86
TraesCS4D01G217900.1	Wheat	cytosol	52.74	53.7
EER95148	Sorghum	cytosol	53.48	53.32
TraesCS4A01G086700.1	Wheat	cytosol	52.3	53.16
GSMUA_Achr8P19650_001	Banana	cytosol, mitochondrion	43.7	52.96
HORVU4Hr1G061820.3	Barley	plastid	52.74	52.35
KXG39737	Sorghum	cytosol	50.67	52.29
TraesCS4A01G213700.1	Wheat	cytosol	44.89	51.18
TraesCS4D01G098800.1	Wheat	cytosol	50.96	50.29
Os04t0129900-01	Rice	cytosol	50.67	50.0
PGSC0003DMT400064491	Potato	cytosol	29.04	49.49
Zm00001d028497_P001	Maize	cytosol	45.48	49.2
Solyc11g069980.1.1	Tomato	cytosol	56.44	47.68
Bra031511.1-P	Field mustard	cytosol	33.93	37.05
Bra025448.1-P	Field mustard	cytosol	23.11	26.76
Bra028525.1-P	Field mustard	cytosol	23.7	26.23
Bra016679.1-P	Field mustard	cytosol	23.56	25.9
Bra014507.1-P	Field mustard	cytosol	24.0	25.88
Bra007513.1-P	Field mustard	cytosol	23.85	25.76
Bra026801.1-P	Field mustard	cytosol	23.26	25.57
Bra037643.1-P	Field mustard	cytosol	23.41	25.57
Bra003469.1-P	Field mustard	cytosol	21.04	24.7
Bra034579.1-P	Field mustard	cytosol	24.74	20.69
Bra011458.1-P	Field mustard	cytosol	24.59	20.57
Bra036991.1-P	Field mustard	cytosol	24.15	20.2
Bra038229.1-P	Field mustard	cytosol	16.15	13.87
Bra038100.1-P	Field mustard	cytosol	14.81	12.2
Bra018449.1-P	Field mustard	cytosol	15.7	11.61
Bra019950.1-P	Field mustard	cytosol	16.15	11.61
Bra031707.1-P	Field mustard	cytosol	15.41	11.37
Bra017901.1-P	Field mustard	cytosol	15.85	11.32
Bra035433.1-P	Field mustard	cytosol	15.85	10.69
Bra037604.1-P	Field mustard	plastid	12.0	10.52

Protein Annotations

Gene3D:1.20.120.1240	Gene3D:3.40.50.300	MapMan:35.1	EnsemblPlantsGene:Bra027151	EnsemblPlants:Bra027151.1	EnsemblPlants:Bra027151.1-P
InterPro:Dynamin_GTPase	InterPro:Dynamin_SF	InterPro:Dynamin_central	InterPro:GED	InterPro:GED_dom	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787
InterPro:G_DYNAMIN_dom	InterPro:IPR020850	InterPro:IPR030381	UniProt:M4EED9	InterPro:P-loop_NTPase	PFAM:PF00350
PFAM:PF01031	PFAM:PF02212	PRINTS:PR00195	PFscan:PS51388	PFscan:PS51718	PANTHER:PTHR11566
PANTHER:PTHR11566:SF135	SMART:SM00053	SMART:SM00302	SUPFAM:SSF52540	UniParc:UPI00025426D9	SEG:seg

Description

AT1G60500 (E=3e-301) | dynamin family protein

Coordinates

chrA09:-:8816113..8818448

Molecular Weight (calculated)

75189.7 Da

IEP (calculated)

6.409

GRAVY (calculated)

-0.068

Length

675 amino acids

Sequence
(BLAST)

001: MAGRNKHVVS KTSSSLAIVE ANPPANKIIP IEAPIVSSYN DRIRPLLDTV DRLRNLNVMR EGIQLPTIVV VGDQSSGKSS VLESLAGISL PRGQGICTRV
101: PLVMRLQRSY STEPEIWLEY GDTVVHTDEE HIAKAICAAT DVIAGSGKGV SDAPLTLHVK KAGVPDLTMV DLPGITRVPV NGQPENIYEQ ISAMIMKYIK
201: PQESIILNVL SATVDFTTCE SIRMSRQVDK TGERTLAVVT KADMAPDGLL QKVTADDVSI GLGYVCVRNR IGEETYQEAR MQEELLFRTH PKLSLIDDDI
301: VGIPVLAQKL MLIQATMIAR CLPEIVRKIN EKMEISVLEL NKLPMVMASA GEALMTLMDI IGSAKESLLR ILIQGDFSEY PEDHKMHCTA RLAEMLSQFS
401: DNLQAHSNDV TVDFLMDEIK ILDECKCVGL PNFIPRSAFL AILSQYVDGI HSKPVEFIKK IWEYIEAVLI PVISKYAENF PQIQSSVKRA GRNLITKMKE
501: QSVNRVAEIV EMEKLTDYTC NPDYMTSWTE KTASQHSFIH AVLYDEAKPE NFSLAGFGEV KISHLRMYHA HLLQQAFDMK MRIASYWNIV LRRIVDNLAL
601: FLQFSVKNLV NAQFQKEIVA EMVDPRGGGG VERMMEESPS VASKREKLKK SVKLLKESKD VVAAIVDQNS GYGGR

Best Arabidopsis Sequence Match ( AT1G60500.1 )
(BLAST)

001: MVKKKVATKK NSPSLAIAKK KSRSNKDVVS VEAPIISSYN DRIRPLLDTV DRLRNLNVMR EGIHLPTIVV VGDQSSGKSS VLESLAGISL PRGQGICTRV
101: PLVMRLQRSS SPEPEIWLEY NDKVVPTDEE HIAEAIRAAT DVIAGSGKGV SDAPLTLHVK KAGVPDLTMV DLPGITRVPV NGQPENIYEQ ISGMIMEYIE
201: PQESIILNVL SATVDFTTCE SIRMSRKVDK TGQRTLAVVT KADMAPEGLL QKVTADDVSI VLGYVCVRNR IGEETYEEAR MQEELLFRTH PVLSLIDEDI
301: VGIPVLAQKL MLIQSSMIAR CLPKIVSKIN QKLDTAVLEL NKLPMVMAST GEALMALMDI IGSAKESLLR ILVQGDFSEY PDDQNMHCTA RLADMLSQFS
401: DSLQAKPKEV AEFLMDEIKI LDECKCVGLP NFIPRSAFLA ILSQHVDGIQ DKPVEFINKI WDYIEDVLSS VTAKRSDNFP QIQSSIKRAG RNLISKIKEQ
501: SVNRVMEIVE MEKLTDYTCN PEYMTSWTQK TSAQESFIDA VVKNENIPDY FSVTGFGNVK ISHLRKYHAH LLIPAFDMKM RITSYWKIVL RRIVDNLALY
601: LQLSVKSLVN TRFQKEIVAE MVDPRDGGGV EKMLEESPLV ASKREKLQNS IKLLKESKDA VAAIVDQNC

Arabidopsis Description

DRP4CDynamin-related protein 4C [Source:UniProtKB/Swiss-Prot;Acc:Q9ZP55]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.