Factsheet for Bra038100.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY25877	Canola	plastid	95.98	95.63
AT1G53140.1	Thale cress	plastid	89.63	89.96
Bra037604.1-P	Field mustard	plastid	78.05	83.12
KRH26094	Soybean	plastid	73.78	75.25
KRH55251	Soybean	plastid	72.93	75.22
VIT_19s0014g02500.t01	Wine grape	plastid	75.85	74.22
PGSC0003DMT400032399	Potato	plastid	73.17	72.73
HORVU2Hr1G095510.1	Barley	cytosol	7.8	72.73
Solyc07g063080.2.1	Tomato	plastid	72.93	72.14
HORVU2Hr1G095500.1	Barley	cytosol	9.88	68.64
GSMUA_Achr2P09480_001	Banana	plastid	66.83	66.99
TraesCS3A01G273500.1	Wheat	plastid	66.71	66.95
TraesCS3B01G307100.1	Wheat	plastid	66.59	66.83
TraesCS3D01G272800.1	Wheat	plastid	66.46	66.71
Os01t0748000-00	Rice	plastid	66.59	66.42
EES03602	Sorghum	plastid	64.88	64.48
Zm00001d043451_P001	Maize	plastid	64.51	64.28
HORVU3Hr1G071340.9	Barley	cytosol, plastid	66.59	63.64
Zm00001d012752_P006	Maize	plastid	61.95	60.55
HORVU1Hr1G001520.1	Barley	cytosol	5.49	50.0
Bra028525.1-P	Field mustard	cytosol	15.37	20.66
Bra025448.1-P	Field mustard	cytosol	14.63	20.58
Bra003469.1-P	Field mustard	cytosol	14.15	20.17
Bra007513.1-P	Field mustard	cytosol	14.15	18.56
Bra016679.1-P	Field mustard	cytosol	13.78	18.4
Bra014507.1-P	Field mustard	cytosol	13.9	18.21
Bra026801.1-P	Field mustard	cytosol	13.54	18.08
Bra037643.1-P	Field mustard	cytosol	13.29	17.64
Bra010250.1-P	Field mustard	cytosol	8.05	16.71
Bra031505.1-P	Field mustard	cytosol	10.85	15.56
Bra031502.1-P	Field mustard	cytosol	11.95	14.98
Bra027151.1-P	Field mustard	cytosol	12.2	14.81
Bra038229.1-P	Field mustard	cytosol	13.78	14.38
Bra011458.1-P	Field mustard	cytosol	13.41	13.63
Bra036991.1-P	Field mustard	cytosol	13.29	13.51
Bra034579.1-P	Field mustard	cytosol	12.93	13.14
Bra017901.1-P	Field mustard	cytosol	12.8	11.11
Bra018449.1-P	Field mustard	cytosol	12.32	11.06
Bra031707.1-P	Field mustard	cytosol	12.2	10.93
Bra019950.1-P	Field mustard	cytosol	12.32	10.76
Bra035433.1-P	Field mustard	cytosol	12.93	10.59
Bra031511.1-P	Field mustard	cytosol	7.32	9.71

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	EnsemblPlantsGene:Bra038100	EnsemblPlants:Bra038100.1	EnsemblPlants:Bra038100.1-P	ncoils:Coil
InterPro:Dynamin_GTPase	InterPro:Dynamin_SF	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:G_DYNAMIN_dom	InterPro:IPR030381	UniProt:M4FAI6
InterPro:P-loop_NTPase	PFAM:PF00350	PRINTS:PR00195	PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF44
SMART:SM00053	SUPFAM:SSF52540	UniParc:UPI00025477F4	SEG:seg	:	:

Description

AT1G53140 (E=3e-275) | dynamin family protein

Coordinates

chrA05:-:10539496..10542418

Molecular Weight (calculated)

90843.1 Da

IEP (calculated)

7.286

GRAVY (calculated)

-0.386

Length

820 amino acids

Sequence
(BLAST)

001: MQSHSQDPAT SESRSRFEAY NRLQAAAVAF GEKLPIPEIV AIGGQSDGKR SLLAALLGFR FNVREVEMGT RRPLILQMVH DVSALEPRCR FQDEDSEEYG
101: SPIVSATAVA DVIRSRTEAL LRKTKTAVSP KPIVMRAEYA HSPNLTIIDT PGFVLKAKKG EPETTPDEIL SMVKSLASPP HRILLFLQQS SVEWCSSLWL
201: DAVREIDSSF RRTIVVVSKF DNRLKVFKDR GEVDRYLSAS GYLGENTRPY FVALPKDRTT VSNDEFRRQI SQVDMDVIRH LREGVKGGFD EEKFRSHIGF
301: GSLRDFLESE LQKRYKDAAP ATLALLEQRC SEVTDDMLRM DMKIQATSDV AHLRKAAMLY MASISNHVGA LIDGAANPAP EQWGKTTEEE RGESGIGSWP
401: GVCLDIKPPN AVLRLYGGAA FERVIHEFRC AAYSIECPPV SREKVANILL AHAGRGGGRG VTEASAEIAR TAARSWLAPL LDTACDRLAF VLGSLFEIAL
501: ERNLNQNSEC KNTILDFLKT HRSPASHEVS LIADEKKAEN MDGYVGFHAA LRNCYSRFVK NLAKQCKQLV RHHLDSVTSP YSMACYESDY HQGGAFGSYY
601: KPNQASGIGS FCFELSDTGR DEPMKDQENI PPEKSKAQET TPGKGEETHI TVPETPSPDQ PCEIGYGLVK KEIGNGHHHD GGGARKRVAR MGGNRNIQPL
701: RIQNGEGGLL FGTTENGMKS SSAYTEICSS AAQHFARIRE VLVERSVTST LNSGFLTPCR DRLVVALGVD LFAVNDEKFM DMFVAPGAID VLQNERQQLQ
801: KRQKILQSCL TEFKTVSRSL

Best Arabidopsis Sequence Match ( AT1G53140.1 )
(BLAST)

001: MANSNTYLTT PTKTPSSRRN QQSQSKMQSH SKDPINAESR SRFEAYNRLQ AAAVAFGEKL PIPEIVAIGG QSDGKSSLLE ALLGFRFNVR EVEMGTRRPL
101: ILQMVHDLSA LEPRCRFQDE DSEEYGSPIV SATAVADVIR SRTEALLKKT KTAVSPKPIV MRAEYAHCPN LTIIDTPGFV LKAKKGEPET TPDEILSMVK
201: SLASPPHRIL LFLQQSSVEW CSSLWLDAVR EIDSSFRRTI VVVSKFDNRL KEFSDRGEVD RYLSASGYLG ENTRPYFVAL PKDRSTISND EFRRQISQVD
301: TEVIRHLREG VKGGFDEEKF RSCIGFGSLR DFLESELQKR YKEAAPATLA LLEERCSEVT DDMLRMDMKI QATSDVAHLR KAAMLYTASI SNHVGALIDG
401: AANPAPEQWG KTTEEERGES GIGSWPGVSV DIKPPNAVLK LYGGAAFERV IHEFRCAAYS IECPPVSREK VANILLAHAG RGGGRGVTEA SAEIARTAAR
501: SWLAPLLDTA CDRLAFVLGS LFEIALERNL NQNSEYEKKT ENMDGYVGFH AAVRNCYSRF VKNLAKQCKQ LVRHHLDSVT SPYSMACYEN NYHQGGAFGA
601: YNKFNQASPN SFCFELSDTS RDEPMKDQEN IPPEKNNGQE TTPGKGGESH ITVPETPSPD QPCEIVYGLV KKEIGNGPDG VGARKRMARM VGNRNIEPFR
701: VQNGGLMFAN ADNGMKSSSA YSEICSSAAQ HFARIREVLV ERSVTSTLNS GFLTPCRDRL VVALGLDLFA VNDDKFMDMF VAPGAIVVLQ NERQQLQKRQ
801: KILQSCLTEF KTVARSL

Arabidopsis Description

DRP5ADRP5A [Source:UniProtKB/TrEMBL;Acc:A0A178WBH9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.