Factsheet for Bra017901.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
endoplasmic reticulum 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	endoplasmic reticulum
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000163.1-P
Bra016679.1-P
Bra017039.1-P
Bra017901.1-P
Bra025448.1-P
Bra026801.1-P
Bra028525.1-P
Bra035433.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G59610.1	Bra016679.1-P	AT1G14830.1	21798944
AT1G59610.1	Bra026801.1-P	AT1G14830.1	21798944
AT1G59610.1	Bra017901.1-P	AT1G59610.1	25462567
AT1G59610.1	Bra035433.1-P	AT1G59610.1	25462567
AT1G59610.1	Bra000163.1-P	AT2G40060.1	20231465
AT1G59610.1	Bra017039.1-P	AT2G40060.1	20231465
AT1G59610.1	Bra025448.1-P	AT5G42080.1	20231465
AT1G59610.1	Bra028525.1-P	AT5G42080.1	20231465

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04455	Canola	cytosol	96.61	99.46
AT1G59610.1	Thale cress	cytosol	93.76	96.3
Bra018449.1-P	Field mustard	cytosol	86.98	90.03
Bra031707.1-P	Field mustard	cytosol	86.98	89.84
Bra035433.1-P	Field mustard	cytosol	94.6	89.31
Bra019950.1-P	Field mustard	cytosol	87.72	88.29
VIT_18s0089g00350.t01	Wine grape	cytosol	78.62	79.81
KRH27552	Soybean	cytosol	76.19	78.09
KRH36411	Soybean	endoplasmic reticulum, nucleus	76.08	77.98
GSMUA_Achr7P05530_001	Banana	nucleus	74.29	76.22
GSMUA_Achr1P18350_001	Banana	cytosol	72.06	76.17
GSMUA_Achr4P20040_001	Banana	cytosol	73.65	75.73
GSMUA_Achr3P01090_001	Banana	nucleus	72.38	74.51
EER88160	Sorghum	cytosol, endoplasmic reticulum, nucleus	71.96	74.48
Zm00001d037279_P005	Maize	plasma membrane	71.64	74.15
VIT_15s0107g00170.t01	Wine grape	cytosol	18.41	74.04
EES05560	Sorghum	nucleus	71.85	73.72
Zm00001d017979_P002	Maize	extracellular, mitochondrion	71.85	73.72
Zm00001d044757_P006	Maize	cytosol, nucleus, plasma membrane	71.01	73.49
TraesCS7D01G200900.1	Wheat	golgi, unclear	69.74	72.98
TraesCS7A01G198100.1	Wheat	cytosol, nucleus, plasma membrane	69.63	72.87
TraesCS7B01G104500.1	Wheat	golgi, unclear	69.31	72.54
TraesCS6D01G291700.1	Wheat	nucleus	69.21	72.43
HORVU7Hr1G040670.2	Barley	cytosol, nucleus, plasma membrane	69.1	72.39
Os06t0247800-01	Rice	plasma membrane	69.74	72.34
Os02t0738900-01	Rice	plasma membrane	70.48	72.16
TraesCS6A01G312300.3	Wheat	nucleus	69.31	71.98
TraesCS6B01G342500.2	Wheat	cytosol	67.09	68.69
HORVU6Hr1G077000.1	Barley	cytosol, mitochondrion, nucleus	70.05	68.18
Os08t0425100-01	Rice	plasma membrane	55.24	68.15
KXG25176	Sorghum	cytosol	53.76	67.55
VIT_19s0015g02240.t01	Wine grape	golgi, mitochondrion, plasma membrane	18.41	65.66
Zm00001d032256_P001	Maize	cytosol	56.61	57.53
Zm00001d051815_P002	Maize	cytosol	31.64	54.46
Bra007513.1-P	Field mustard	cytosol	19.58	29.6
Bra014507.1-P	Field mustard	cytosol	19.47	29.39
Bra037643.1-P	Field mustard	cytosol	19.05	29.13
Bra003469.1-P	Field mustard	cytosol	17.67	29.04
Bra026801.1-P	Field mustard	cytosol	18.41	28.34
Bra016679.1-P	Field mustard	cytosol	18.31	28.18
Bra028525.1-P	Field mustard	cytosol	18.1	28.03
Bra025448.1-P	Field mustard	cytosol	17.04	27.62
Bra011458.1-P	Field mustard	cytosol	15.77	18.46
Bra036991.1-P	Field mustard	cytosol	15.77	18.46
Bra034579.1-P	Field mustard	cytosol	15.66	18.34
Bra010250.1-P	Field mustard	cytosol	6.67	15.95
Bra027151.1-P	Field mustard	cytosol	11.32	15.85
Bra031505.1-P	Field mustard	cytosol	9.52	15.73
Bra031502.1-P	Field mustard	cytosol	10.79	15.6
Bra038229.1-P	Field mustard	cytosol	11.64	13.99
Bra038100.1-P	Field mustard	cytosol	11.11	12.8
Bra037604.1-P	Field mustard	plastid	9.1	11.17
HORVU4Hr1G074040.2	Barley	nucleus	2.75	10.16
HORVU5Hr1G092990.14	Barley	cytosol	2.75	9.81
Bra031511.1-P	Field mustard	cytosol	6.24	9.55
HORVU4Hr1G073960.12	Barley	cytosol	3.81	9.02

Protein Annotations

Gene3D:1.20.120.1240	Gene3D:2.30.29.30	MapMan:22.1.7.2	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra017901	EnsemblPlants:Bra017901.1
EnsemblPlants:Bra017901.1-P	ncoils:Coil	InterPro:Dynamin_GTPase	InterPro:Dynamin_GTPase_CS	InterPro:Dynamin_SF	InterPro:Dynamin_central
InterPro:GED	InterPro:GED_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
InterPro:G_DYNAMIN_dom	InterPro:IPR001849	InterPro:IPR011993	InterPro:IPR020850	InterPro:IPR030381	UniProt:M4DN14
InterPro:P-loop_NTPase	PFAM:PF00169	PFAM:PF00350	PFAM:PF01031	PFAM:PF02212	InterPro:PH-like_dom_sf
InterPro:PH_domain	PRINTS:PR00195	ScanProsite:PS00410	PFscan:PS50003	PFscan:PS51388	PFscan:PS51718
PANTHER:PTHR11566	PANTHER:PTHR11566:SF57	SMART:SM00053	SMART:SM00233	SUPFAM:SSF50729	SUPFAM:SSF52540
TMHMM:TMhelix	UniParc:UPI0002540E43	SEG:seg	:	:	:

Description

AT1G59610 (E=0.0) ADL3, CF1 | ADL3 (ARABIDOPSIS DYNAMIN-LIKE 3); GTPase

Coordinates

chrA03:-:31540532..31547659

Molecular Weight (calculated)

102953.0 Da

IEP (calculated)

8.964

GRAVY (calculated)

-0.481

Length

945 amino acids

Sequence
(BLAST)

001: MEAIDELSQL SDSMRQAAAL LADEDPEESS SSRRPATSLN VVALGNVVGV SFLFDVCLYL VSVDFGFRMV DLNEGAGKSA VLNSLIGHPV LPTGENGATR
101: APIIIDLSRE ESLSSKAIIL QIDNKSQQVS ASALRHSLQD RLSKGATGRG RDEIYLKLRT STAPPLKLID LPGLDQRIVD DAMIGEHAQH NDAILLVIVP
201: ASQASEISSC RALKTAKEYD PDSTRTVGII SKIDQAAENP KALAAVQALL SNQGPPKTTD IPWVALIGQS VSIASAQSGG SENSLETAWR AETESLKSIL
301: TGAPQNKLGR IALVDTLASQ IRSRMKLRLP NILSGLQGKS QVVQDELARL GEQLVSSVEG TRAIALELCR EFEDKFLLHL AGGEGSGWKV VASFEGNFPN
401: RIKQLPLDRY FDLNNVKRIV LEADGYQPYL ISPEKGLRSL IKIVLELAKD PARLCVDEVH RVLVDIVSAS ANATPGLGRY PPFKREVVAI ASAALDGFKN
501: EAKKMVVALV DMERAFVPPQ HFIRLVQRRM ERQRREDELK GRSSKKGQDA EQSLLNRASS PQPDGSSTGG SLKSLKDKFL PQDKDKDKET PEVSGLKTAG
601: PEGEITAGYL MKKSAKTNGW SRRWFVLNEK TGKLGYTKKQ EERNFRGTVT LEECSIEEIS DDEGEKSKSS KDKKSNGPDS KGPGLVFKIT CRVPYKTVLK
701: AHNALILKAE SMVDKNEWIN KLQKVIQARG GQVGGASMRQ SLSEGSLDKM VRKPVDPEEE LRWMSQEVRG YVEAVLNSLA ANVPKAVVLC QVEKSKEDML
801: NQLYSSISAI GNERIESLIQ EDQNVKRKRD RYQKQSSLLS KLTRQLSIHD NRAAAASSWS DSGTESSPRT NGGSAGEDWM NAFNAAASGP DSLKRYGSGG
901: HSRRYSDPAQ NGEDDSSGSG GSNRRTTPNR LPPAPPQSGG SSYRY

Best Arabidopsis Sequence Match ( AT1G59610.1 )
(BLAST)

001: MEAIDELSQL SDSMRQAASL LADEDPDETS SSRRPATSLN VVALGNVGAG KSAVLNSLIG HPVLPTGENG ATRAPIIIDL SREESLSSKA IILQIDNKNQ
101: QVSASALRHS LQDRLSKGAS GRGRDEIYLK LRTSTAPPLK LIDLPGLDQR IVDDSMIGEH AQHNDAILLV VVPASQASEI SSSRALKIAK EYDPESTRTV
201: GIISKIDQAA ENPKSLAAVQ ALLSNQGPPK TTDIPWVALI GQSVSIASAQ SGGSENSLET AWRAESESLK SILTGAPQSK LGRIALVDTL ASQIRSRMKL
301: RLPNILTGLQ GKSQIVQDEL ARLGEQLVSS AEGTRAIALE LCREFEDKFL LHLAGGEGSG WKVVASFEGN FPNRIKKLPL DRHFDLNNVK RIVLEADGYQ
401: PYLISPEKGL RSLIKTVLEL AKDPARLCVD EVHRVLVDIV SASANATPGL GRYPPFKREV VAIASAALDG FKNEAKKMVV ALVDMERAFV PPQHFIRLVQ
501: RRMERQRREE ELKGRSSKKG QDAEQSLLNR ATSPQPDGPS STGGSLKSLR DKLMPQDKDK DKEKETPEVS GLKTAGPEGE ITAGYLMKKS AKTNGWSRRW
601: FVLNEKTGKL GYTKKQEERN FRGTVTLEEC SIEEISDDEG EKSKSSKDKK SNGPDSKGPG LVFKITCRVP YKTVLKAHNA LVLKAESMVD KNEWINKLQK
701: VIQARGGQVG SASMRQSLSE GSLDKMVRKP VDPEEELRWM SQEVRGYVEA VLNSLAANVP KAVVLCQVEK SKEDMLNQLY SSISAIGNER IESLIQEDQN
801: VKRRRDRYQK QSSLLSKLTR QLSIHDNRAA AASSWSDNSG TESSPRTNGG SSGEDWMNAF NAAASGPDSL KRYGSGGHSR RYSDPAQNGE DSSGSGGSSR
901: RTTPNRLPPA PPQSGSSYRY

Arabidopsis Description

DRP2BDynamin-2B [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ55]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.