Factsheet for HORVU7Hr1G040670.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, nucleus, plasma membrane
MultiLoc:	nucleus
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G084970.2
HORVU4Hr1G007880.11
HORVU4Hr1G073960.12	plasma membrane
HORVU4Hr1G074040.2	plasma membrane
HORVU5Hr1G092990.14	plasma membrane
HORVU6Hr1G077000.1	plasma membrane
HORVU7Hr1G040670.2	plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G10290.1	HORVU4Hr1G073960.12	AT1G10290.1	25462567
AT1G10290.1	HORVU4Hr1G074040.2	AT1G10290.1	25462567
AT1G10290.1	HORVU5Hr1G092990.14	AT1G10290.1	25462567
AT1G10290.1	HORVU6Hr1G077000.1	AT1G10290.1	25462567
AT1G10290.1	HORVU7Hr1G040670.2	AT1G10290.1	25462567
AT1G10290.1	HORVU4Hr1G073960.12	AT1G59610.1	25462567
AT1G10290.1	HORVU4Hr1G074040.2	AT1G59610.1	25462567
AT1G10290.1	HORVU5Hr1G092990.14	AT1G59610.1	25462567
AT1G10290.1	HORVU6Hr1G077000.1	AT1G59610.1	25462567
AT1G10290.1	HORVU7Hr1G040670.2	AT1G59610.1	25462567
AT1G10290.1	HORVU4Hr1G073960.12	AT1G59610.1	25462567
AT1G10290.1	HORVU4Hr1G074040.2	AT1G59610.1	25462567
AT1G10290.1	HORVU5Hr1G092990.14	AT1G59610.1	25462567
AT1G10290.1	HORVU6Hr1G077000.1	AT1G59610.1	25462567
AT1G10290.1	HORVU7Hr1G040670.2	AT1G59610.1	25462567
AT1G59610.1	HORVU4Hr1G007880.11	AT1G14830.1	21798944
AT1G59610.1	HORVU4Hr1G073960.12	AT1G59610.1	25462567
AT1G59610.1	HORVU4Hr1G074040.2	AT1G59610.1	25462567
AT1G59610.1	HORVU5Hr1G092990.14	AT1G59610.1	25462567
AT1G59610.1	HORVU6Hr1G077000.1	AT1G59610.1	25462567
AT1G59610.1	HORVU7Hr1G040670.2	AT1G59610.1	25462567
AT1G59610.1	HORVU1Hr1G084970.2	AT5G42080.1	20231465

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G104500.1	Wheat	golgi, unclear	98.45	98.34
TraesCS7D01G200900.1	Wheat	golgi, unclear	97.67	97.56
TraesCS7A01G198100.1	Wheat	cytosol, nucleus, plasma membrane	97.45	97.34
EER88160	Sorghum	cytosol, endoplasmic reticulum, nucleus	87.92	86.86
Zm00001d037279_P005	Maize	plasma membrane	87.58	86.53
Zm00001d044757_P006	Maize	cytosol, nucleus, plasma membrane	87.47	86.42
Os06t0247800-01	Rice	plasma membrane	86.7	85.84
HORVU6Hr1G077000.1	Barley	cytosol, mitochondrion, nucleus	82.71	76.83
CDY31035	Canola	cytosol	52.88	76.2
CDX94910	Canola	cytosol	39.69	75.37
CDY20643	Canola	cytosol	52.77	75.2
GSMUA_Achr7P05530_001	Banana	nucleus	76.5	74.92
GSMUA_Achr1P18350_001	Banana	cytosol	73.84	74.5
GSMUA_Achr4P20040_001	Banana	cytosol	75.61	74.21
VIT_18s0089g00350.t01	Wine grape	cytosol	76.27	73.9
KRH36411	Soybean	endoplasmic reticulum, nucleus	74.28	72.67
KRH27552	Soybean	cytosol	74.28	72.67
GSMUA_Achr3P01090_001	Banana	nucleus	73.95	72.66
Bra018449.1-P	Field mustard	cytosol	73.17	72.29
AT1G10290.1	Thale cress	cytosol	72.84	71.88
CDX93442	Canola	cytosol	72.17	71.46
AT1G59610.1	Thale cress	cytosol	72.84	71.41
CDY45889	Canola	cytosol	72.73	71.3
CDY04455	Canola	cytosol	72.28	71.02
Bra031707.1-P	Field mustard	cytosol	71.73	70.71
CDY34897	Canola	cytosol	71.73	70.71
CDY27283	Canola	cytosol	59.2	69.99
CDX94909	Canola	mitochondrion	55.99	69.46
Bra019950.1-P	Field mustard	cytosol	72.17	69.33
Bra017901.1-P	Field mustard	cytosol	72.39	69.1
CDY44550	Canola	cytosol	72.62	67.95
VIT_15s0107g00170.t01	Wine grape	cytosol	17.07	65.53
Bra035433.1-P	Field mustard	cytosol	72.51	65.33
VIT_00s0267g00020.t01	Wine grape	cytosol	10.42	59.87
VIT_19s0015g02240.t01	Wine grape	golgi, mitochondrion, plasma membrane	17.18	58.49
HORVU4Hr1G007880.11	Barley	cytosol	19.51	27.72
HORVU1Hr1G054560.1	Barley	mitochondrion	20.62	27.03
HORVU1Hr1G084970.2	Barley	plasma membrane	18.63	24.85
HORVU2Hr1G068810.3	Barley	cytosol	17.63	19.97
HORVU6Hr1G058700.1	Barley	cytosol	2.33	19.63
HORVU3Hr1G094260.4	Barley	cytosol	17.63	19.51
HORVU4Hr1G061820.3	Barley	plastid	11.64	15.44
HORVU3Hr1G071340.9	Barley	cytosol, plastid	11.64	12.24
HORVU5Hr1G092990.14	Barley	cytosol	2.77	9.43
HORVU4Hr1G074040.2	Barley	nucleus	2.66	9.38
HORVU2Hr1G095510.1	Barley	cytosol	0.89	9.09
HORVU4Hr1G073960.12	Barley	cytosol	3.77	8.52
HORVU1Hr1G001520.1	Barley	cytosol	0.78	7.78
HORVU2Hr1G095500.1	Barley	cytosol	1.0	7.63

Protein Annotations

Gene3D:1.20.120.1240	Gene3D:2.30.29.30	MapMan:22.1.7.2	Gene3D:3.40.50.300	UniProt:A0A287W654	ncoils:Coil
InterPro:Dynamin_GTPase	InterPro:Dynamin_GTPase_CS	InterPro:Dynamin_SF	InterPro:Dynamin_central	InterPro:GED	InterPro:GED_dom
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525
GO:GO:0016787	InterPro:G_DYNAMIN_dom	EnsemblPlantsGene:HORVU7Hr1G040670	EnsemblPlants:HORVU7Hr1G040670.2	InterPro:IPR001849	InterPro:IPR011993
InterPro:IPR020850	InterPro:IPR030381	InterPro:P-loop_NTPase	PFAM:PF00169	PFAM:PF00350	PFAM:PF01031
PFAM:PF02212	InterPro:PH-like_dom_sf	InterPro:PH_domain	PRINTS:PR00195	ScanProsite:PS00410	PFscan:PS50003
PFscan:PS51388	PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF134	SMART:SM00053	SMART:SM00233
SMART:SM00302	SUPFAM:SSF50729	SUPFAM:SSF52540	UniParc:UPI000B472C42	SEG:seg	:

Description

No Description!

Coordinates

chrchr7H:-:110753322..110854897

Molecular Weight (calculated)

98498.9 Da

IEP (calculated)

9.752

GRAVY (calculated)

-0.557

Length

902 amino acids

Sequence
(BLAST)

001: MEAMEELSQL SESIRQAASL LADDDPSDDS APRRPSTFLN AVVLGNVGSG KSAVLNSLIG HPVLPTGENG ATRAPIVVDL QREPGLSTKS IVLQIDSKSQ
101: QVSATALRHS LQDRLSKSVS GRGRSDEISL KLRTSTAPAL KLIDLPGLDQ RAVDDSMIND YAGHNDAILL VVIPAVQAAE VASSRAIRLA KDIDSDGSRT
201: IGILSKIDQA EGDAKTIACV QALLSNKGPK NLPDIEWVAL VGQSVTIASA QSGSVGSENS LETAWQAEAE TLKSILTGAP QSKLGRVSLV SAIAKQIRKR
301: MKVRLPNLLT GLQGKSQMVQ AELARLGESM VQSPEGTRAV ALELCREFED KFLAHITSGE GSGWKIVASF EGKFPDRIKQ LPLDRHFDLN NVKRIVLEAD
401: GYQPYLISPE KGLRSLIKIV LDMAKEPSRL CVDEVHRVLL DIVNASANAT PGLGRYPPFK REVIAIASNA LDNFKSDAKK MVVALVDMER AFVPAQHFIR
501: LVQRRMERQR REDEMRNRPS KKGQESEQSV TNRASSPQTK SEQAGSSKPT KEKPSPDKDT KEGPNLQVAG PAGEITAGYL LKKSAKTNGW SRRWFVLNEK
601: SGKLGYTKKQ EERHFRGVIT LEECNLEEVD EEEPSKSLKD SKKANGPEKG PSLVFKITNR VAYKTVLKAH SAVVLKAEST ADKVEWVNKI KAVIQSKGGS
701: FKAANSEGGL LKQNQPDSST DAMIRRPADP EEELRWMSQE VRGYVEAVLN SLAANVPKAI VLCQVEKAKE DMLNQLYSSI SGQSNAKIEE LLQEDHNAKR
801: RREKYQKQSS LLSKLTRQLS IHDNRAAASS YSNDSPEAES PRTPGRPGED WRSAFDSAAN GPAPNIESRS RSADSRGRSE NGDPNSSSRR TPNRLPPAPP
901: RY

Best Arabidopsis Sequence Match ( AT1G59610.1 )
(BLAST)

001: MEAIDELSQL SDSMRQAASL LADEDPDETS SSRRPATSLN VVALGNVGAG KSAVLNSLIG HPVLPTGENG ATRAPIIIDL SREESLSSKA IILQIDNKNQ
101: QVSASALRHS LQDRLSKGAS GRGRDEIYLK LRTSTAPPLK LIDLPGLDQR IVDDSMIGEH AQHNDAILLV VVPASQASEI SSSRALKIAK EYDPESTRTV
201: GIISKIDQAA ENPKSLAAVQ ALLSNQGPPK TTDIPWVALI GQSVSIASAQ SGGSENSLET AWRAESESLK SILTGAPQSK LGRIALVDTL ASQIRSRMKL
301: RLPNILTGLQ GKSQIVQDEL ARLGEQLVSS AEGTRAIALE LCREFEDKFL LHLAGGEGSG WKVVASFEGN FPNRIKKLPL DRHFDLNNVK RIVLEADGYQ
401: PYLISPEKGL RSLIKTVLEL AKDPARLCVD EVHRVLVDIV SASANATPGL GRYPPFKREV VAIASAALDG FKNEAKKMVV ALVDMERAFV PPQHFIRLVQ
501: RRMERQRREE ELKGRSSKKG QDAEQSLLNR ATSPQPDGPS STGGSLKSLR DKLMPQDKDK DKEKETPEVS GLKTAGPEGE ITAGYLMKKS AKTNGWSRRW
601: FVLNEKTGKL GYTKKQEERN FRGTVTLEEC SIEEISDDEG EKSKSSKDKK SNGPDSKGPG LVFKITCRVP YKTVLKAHNA LVLKAESMVD KNEWINKLQK
701: VIQARGGQVG SASMRQSLSE GSLDKMVRKP VDPEEELRWM SQEVRGYVEA VLNSLAANVP KAVVLCQVEK SKEDMLNQLY SSISAIGNER IESLIQEDQN
801: VKRRRDRYQK QSSLLSKLTR QLSIHDNRAA AASSWSDNSG TESSPRTNGG SSGEDWMNAF NAAASGPDSL KRYGSGGHSR RYSDPAQNGE DSSGSGGSSR
901: RTTPNRLPPA PPQSGSSYRY

Arabidopsis Description

DRP2BDynamin-2B [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ55]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.