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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX93442
CDX94909
CDX94910
CDY04455 plasma membrane
CDY20643
CDY27283 plasma membrane
CDY31035
CDY34897
CDY44550 plasma membrane
CDY45889 plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G10290.1 CDX93442 AT1G10290.1 25462567
AT1G10290.1 CDX94909 AT1G10290.1 25462567
AT1G10290.1 CDX94910 AT1G10290.1 25462567
AT1G10290.1 CDY20643 AT1G10290.1 25462567
AT1G10290.1 CDY31035 AT1G10290.1 25462567
AT1G10290.1 CDY34897 AT1G10290.1 25462567
AT1G10290.1 CDY04455 AT1G59610.1 25462567
AT1G10290.1 CDY27283 AT1G59610.1 25462567
AT1G10290.1 CDY44550 AT1G59610.1 25462567
AT1G10290.1 CDY45889 AT1G59610.1 25462567
AT1G10290.1 CDY04455 AT1G59610.1 25462567
AT1G10290.1 CDY27283 AT1G59610.1 25462567
AT1G10290.1 CDY44550 AT1G59610.1 25462567
AT1G10290.1 CDY45889 AT1G59610.1 25462567
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_15s0107g00170.t01 Wine grape cytosol 36.42 73.62
CDY31035 Canola cytosol 90.95 69.01
CDY20643 Canola cytosol 90.95 68.25
VIT_19s0015g02240.t01 Wine grape golgi, mitochondrion, plasma membrane 35.16 63.02
CDX93442 Canola cytosol 97.89 51.04
Bra019950.1-P Field mustard cytosol 97.68 49.41
AT1G10290.1 Thale cress cytosol 94.32 49.02
CDY34897 Canola cytosol 93.47 48.52
CDY45889 Canola cytosol 91.37 47.17
CDY04455 Canola cytosol 90.53 46.84
CDY44550 Canola cytosol 92.0 45.33
KXG25176 Sorghum cytosol 69.26 43.75
Os08t0425100-01 Rice plasma membrane 69.89 43.34
VIT_18s0089g00350.t01 Wine grape cytosol 83.16 42.43
GSMUA_Achr1P18350_001 Banana cytosol 78.53 41.72
KRH36411 Soybean endoplasmic reticulum, nucleus 80.21 41.32
KRH27552 Soybean cytosol 79.79 41.11
GSMUA_Achr7P05530_001 Banana nucleus 78.95 40.72
CDY27283 Canola cytosol 65.26 40.63
GSMUA_Achr4P20040_001 Banana cytosol 78.11 40.37
GSMUA_Achr3P01090_001 Banana nucleus 77.89 40.3
EER88160 Sorghum cytosol, endoplasmic reticulum, nucleus 76.63 39.87
TraesCS7A01G198100.1 Wheat cytosol, nucleus, plasma membrane 75.58 39.76
TraesCS7D01G200900.1 Wheat golgi, unclear 75.58 39.76
TraesCS7B01G104500.1 Wheat golgi, unclear 75.58 39.76
EES05560 Sorghum nucleus 77.05 39.74
Zm00001d017979_P002 Maize extracellular, mitochondrion 77.05 39.74
Os06t0247800-01 Rice plasma membrane 76.21 39.74
HORVU7Hr1G040670.2 Barley cytosol, nucleus, plasma membrane 75.37 39.69
Zm00001d037279_P005 Maize plasma membrane 76.21 39.65
Os02t0738900-01 Rice plasma membrane 76.21 39.22
Zm00001d044757_P006 Maize cytosol, nucleus, plasma membrane 75.16 39.1
TraesCS6D01G291700.1 Wheat nucleus 74.11 38.98
TraesCS6A01G312300.3 Wheat nucleus 74.53 38.9
TraesCS6B01G342500.2 Wheat cytosol 74.32 38.24
CDX94909 Canola mitochondrion 56.63 37.0
HORVU6Hr1G077000.1 Barley cytosol, mitochondrion, nucleus 74.32 36.35
Zm00001d032256_P001 Maize cytosol 66.74 34.09
CDX71832 Canola cytosol 31.16 23.68
CDY41188 Canola cytosol 31.16 23.68
CDY42672 Canola cytosol 30.95 23.52
CDX89053 Canola cytosol 30.95 23.48
CDY25074 Canola cytosol 29.05 22.62
CDX67862 Canola cytosol 28.84 22.46
CDY23444 Canola cytosol 29.05 22.33
CDY30477 Canola cytosol 28.84 22.17
CDY33737 Canola cytosol 28.63 22.15
CDX81675 Canola cytosol 28.63 22.15
CDY52026 Canola cytosol 28.21 21.82
CDX84001 Canola cytosol 28.21 21.82
CDX99702 Canola cytosol 28.0 21.8
CDY27661 Canola cytosol 27.79 21.64
CDY13364 Canola cytosol 27.79 21.64
CDX67529 Canola cytosol 27.79 21.64
CDY35022 Canola cytosol 11.37 18.82
CDY35023 Canola cytosol 12.63 17.29
CDY53048 Canola cytosol 16.63 15.8
CDY36456 Canola cytosol 6.11 15.59
CDY29721 Canola cytosol 5.05 15.48
CDY47216 Canola cytosol 16.63 14.68
CDY47217 Canola cytosol 15.79 14.59
Zm00001d051815_P002 Maize cytosol 14.32 12.39
CDY24536 Canola cytosol 17.05 12.39
CDY34120 Canola cytosol 17.05 12.39
CDY02039 Canola cytosol, plastid 14.53 12.34
CDY28314 Canola cytosol 20.63 12.16
CDY48440 Canola cytosol 20.63 12.14
CDY46101 Canola cytosol 20.21 11.96
CDX68994 Canola cytosol 20.42 11.93
CDX72418 Canola cytosol 20.0 11.43
CDX75370 Canola cytosol 20.0 11.31
CDY53046 Canola cytosol 16.0 11.28
CDY23281 Canola cytosol 9.05 10.86
CDY34117 Canola cytosol 12.0 10.8
CDY03289 Canola cytosol 12.0 10.8
CDY33414 Canola cytosol 16.63 10.17
CDY42203 Canola cytosol 16.63 10.05
HORVU4Hr1G074040.2 Barley nucleus 5.26 9.77
CDY25877 Canola plastid 16.63 9.6
HORVU5Hr1G092990.14 Barley cytosol 5.26 9.43
CDY50514 Canola plastid 13.47 8.36
HORVU4Hr1G073960.12 Barley cytosol 6.53 7.77
CDY24530 Canola cytosol, nucleus, plasma membrane 9.89 7.41
CDY29720 Canola cytosol, extracellular 2.74 3.04
CDY53047 Canola cytosol 0.0 0.0
Protein Annotations
Gene3D:1.20.120.1240MapMan:22.1.7.2Gene3D:3.40.50.300GO:A0A078DZZ3EnsemblPlants:CDX94910ProteinID:CDX94910
ProteinID:CDX94910.1InterPro:Dynamin_GTPaseInterPro:Dynamin_GTPase_CSInterPro:Dynamin_SFInterPro:Dynamin_centralGO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0003924GO:GO:0005488GO:GO:0005525GO:GO:0016787
EnsemblPlantsGene:GSBRNA2T00100383001InterPro:G_DYNAMIN_domInterPro:IPR030381InterPro:P-loop_NTPasePFAM:PF00350PFAM:PF01031
PRINTS:PR00195ScanProsite:PS00410PFscan:PS51718PANTHER:PTHR11566PANTHER:PTHR11566:SF57SMART:SM00053
SUPFAM:SSF52540UniParc:UPI0004EEB8C8::::
Description
BnaC05g07610D
Coordinates
chrLK031886:-:98020..101715
Molecular Weight (calculated)
50936.2 Da
IEP (calculated)
6.897
GRAVY (calculated)
-0.089
Length
475 amino acids
Sequence
(BLAST)
001: MEAIDELSQL SDSMKQAASL LADEDPDETS SSRRPATFLN VVALGNVGAG KSAVLNSLIG HPVLPTGENG ATRAPIIIDL SREASLSSKA IILQIDNKSQ
101: QVSASALRHS LQDRLSKGAS GKNRDQIYLN LRTSTAPPLK LVDLPGLDQR IVDDSMIAEY AQHNDAILLV IVPASQASEI SSSRALKIAK EHDPESTRTV
201: GIIGKIDQAA ENPKALAAVQ ALLSNQGPPK TTDIPWVALI GQSVAIASAQ SGSGENSLET AWRAESESLK SILTGAPQSK LGRVALVDTL ASQIRSRMKL
301: RLPSILSGLQ GKSQIVQNEL ARLGEQLVNS AEGTRAIALE LCREFEEKFL LHLAGGEGSG WKVVASFEGN FPNQIKQLPL DRHFDLNNVK RVVLEADGYQ
401: PYLISPEKGL RSLIKIVLEL AKDPARLCVD EVHRVLVDIV SASANATPGL GRYPPFKREV IMLGGVLFSS ILSFR
Best Arabidopsis Sequence Match ( AT1G10290.1 )
(BLAST)
001: MEAIDELSQL SDSMKQAASL LADEDPDETS SSKRPATFLN VVALGNVGAG KSAVLNSLIG HPVLPTGENG ATRAPIIIEL SRESSLSSKA IILQIDNKSQ
101: QVSASALRHS LQDRLSKGAS GKNRDEINLK LRTSTAPPLK LVDLPGLDQR IVDESMIAEY AQHNDAILLV IVPASQASEI SSSRALKIAK EYDPESTRTI
201: GIIGKIDQAA ENSKALAAVQ ALLSNQGPPK TTDIPWVAVI GQSVSIASAQ SGSGENSLET AWRAESESLK SILTGAPQSK LGRIALVDTL ASQIRSRMKL
301: RLPSVLSGLQ GKSQIVQDEL ARLGEQLVNS AEGTRAIALE LCREFEDKFL LHLAGGEGSG WKVVASFEGN FPNRIKQLPL DRHFDLNNVK RVVLEADGYQ
401: PYLISPEKGL RSLIKIVLEL AKDPARLCVD EVHRVLVDIV SASANATPGL GRYPPFKREV VAIASAALDG FKNEAKKMVV ALVDMERAFV PPQHFIRLVQ
501: RRMERQRREE ELKGRSSKKG QDAEQSLLSR ATSPQPDGPT AGGSLKSMKD KPSPQDKETP EVSGLKTAGP EGEITAGYLM KKSAKTNGWS RRWFVLNEKT
601: GKLGYTKKQE ERNFRGTITL EECTIEEIPE DEVEKSKSSK DKKANGPDSK GPGLVFKITC KVPYKTVLKA HNALVLKAES VVDKNEWINK LQKVIQARGG
701: QVGSVSMRQS LSEGSLDKMV RKPIDPEEEL RWMSQEVRGY VEAVLNSLAA NVPKAVVLCQ VEKAKEDMLN QLYSSISAIG NERIESLIQE DQNVKRRRER
801: YQKQSSLLSK LTRQLSIHDN RAAAASSYSD NSGTESSPRA SGGSSGDDWM NAFNSAANGP SDSLSKYGSG GHSRRYSDPA QNGDAASPGS GSNRRTTPNR
901: LPPAPPPTGS AYRY
Arabidopsis Description
DRP2ADRP2A [Source:UniProtKB/TrEMBL;Acc:A0A178WBB3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.