CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35022	Canola	cytosol	82.42	99.65
CDX67529	Canola	cytosol	57.64	32.79
CDY27661	Canola	cytosol	57.64	32.79
CDY13364	Canola	cytosol	57.35	32.62
CDX99702	Canola	cytosol	56.77	32.3
CDX67862	Canola	cytosol	51.59	29.34
CDY25074	Canola	cytosol	51.3	29.18
CDY52026	Canola	cytosol	48.99	27.69
CDX81675	Canola	cytosol	48.99	27.69
CDX84001	Canola	cytosol	48.99	27.69
CDY33737	Canola	cytosol	48.99	27.69
CDX71832	Canola	cytosol	49.57	27.52
CDY41188	Canola	cytosol	49.28	27.36
CDY42672	Canola	cytosol	48.99	27.2
CDX89053	Canola	cytosol	48.99	27.16
CDY23444	Canola	cytosol	46.97	26.38
CDY30477	Canola	cytosol	46.97	26.38
CDY29721	Canola	cytosol	8.65	19.35
CDY36456	Canola	cytosol	8.36	15.59
CDY53048	Canola	cytosol	21.61	15.0
CDY47217	Canola	cytosol	21.9	14.79
CDY47216	Canola	cytosol	21.61	13.94
CDX68994	Canola	cytosol	31.41	13.41
CDY23281	Canola	cytosol	15.27	13.38
CDY28314	Canola	cytosol	30.84	13.28
CDY46101	Canola	cytosol	30.55	13.2
CDY48440	Canola	cytosol	30.55	13.14
CDX75370	Canola	cytosol	31.7	13.1
CDX72418	Canola	cytosol	30.55	12.76
CDX94910	Canola	cytosol	17.29	12.63
CDY02039	Canola	cytosol, plastid	19.88	12.34
CDY24536	Canola	cytosol	22.19	11.77
CDY34120	Canola	cytosol	22.19	11.77
CDY53046	Canola	cytosol	22.77	11.72
CDY31035	Canola	cytosol	17.58	9.74
CDY20643	Canola	cytosol	17.58	9.64
CDY25877	Canola	plastid	18.73	7.9
CDY33414	Canola	cytosol	17.58	7.85
CDY03289	Canola	cytosol	11.82	7.77
CDY34117	Canola	cytosol	11.82	7.77
CDY42203	Canola	cytosol	17.58	7.76
CDX93442	Canola	cytosol	19.02	7.24
CDY34897	Canola	cytosol	18.73	7.1
CDY45889	Canola	cytosol	18.16	6.85
CDY04455	Canola	cytosol	17.87	6.75
CDY44550	Canola	cytosol	18.16	6.54
CDY24530	Canola	cytosol, nucleus, plasma membrane	10.37	5.68
CDY50514	Canola	plastid	12.39	5.61
CDY27283	Canola	cytosol	10.95	4.98
CDX94909	Canola	mitochondrion	5.76	2.75
CDY53047	Canola	cytosol	0.58	2.06
CDY29720	Canola	cytosol, extracellular	1.44	1.17

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	GO:A0A078HDZ8	UniProt:A0A078HDZ8	EnsemblPlants:CDY35023	ProteinID:CDY35023
ProteinID:CDY35023.1	InterPro:Dynamin_GTPase	InterPro:Dynamin_GTPase_CS	InterPro:Dynamin_SF	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00057863001
InterPro:G_DYNAMIN_dom	InterPro:IPR030381	InterPro:P-loop_NTPase	PFAM:PF00350	PRINTS:PR00195	ScanProsite:PS00410
PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF58	SMART:SM00053	SUPFAM:SSF52540	UniParc:UPI0004EEC1AA

Description

BnaC06g13630DBnaC06g13630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HDZ8]

Coordinates

chrLK032345:-:64898..72406

Molecular Weight (calculated)

38103.4 Da

IEP (calculated)

5.221

GRAVY (calculated)

-0.285

Length

347 amino acids

Sequence
(BLAST)

001: MYAADNLTLI DLPELTKVAV KGQSESIVKG IENVVRSYTE KPNRIILAIS PANQDRAASD AIIISREVDP SGEITFGVLK NIDLMDKGTD AVDRLGKSSV
101: LESIVGKDSL PRGSGIVTRR PLVLKLQTID DGTREYAEFL HLPRKRFTDF AAVRKEIQDE IDRETGRSKA ISSVPIHLSI YSPDVVNLRL IDLPELTKVS
201: VDGQSESIVK GIENVVRSYI EKPNDIILAI SPVKKDLASS DAIKISREVD PSGERTFGVL TKIDLVDYGT NAVEILEERS FKLKDPSSGK SSALESIVGK
301: DFLPRGSAAV RKEIQDETDR ETGRSKAISS VPIHRSIYSP DGWDTTF

Best Arabidopsis Sequence Match ( AT3G61760.3 )
(BLAST)

001: MESLIALVNK IQRACTALGD HGEGSSLPTL WDSLPAIAVV GGQSSGKSSV LESVVGKDFL PRGAGIVTRR PLVLQLHRID EGKEYAEFMH LPKKKFTDFA
101: AVRQEISDET DRETGRSSKV ISTVPIHLSI FSPNVVNLTL VDLPGLTKVA VDGQPESIVQ DIENMVRSFI EKPNCIILAI SPANQDLATS DAIKISREVD
201: PKGDRTFGVL TKIDLMDQGT NAVDILEGRG YKLRYPWVGV VNRSQADINK SVDMIAARRR ERDYFQTSPE YRHLTERMGS EYLGKMLSKH LEVVIKSRIP
301: GLQSLITKTI SELETELSRL GKPVAADAGG KLYMIMEICR AFDQTFKEHL DGTRSGGEKI NSVFDNQFPA AIKRLQFDKH LSMDNVRKLI TEADGYQPHL
401: IAPEQGYRRL IESCLVSIRG PAEAAVDAVH SILKDLIHKS MGETSVRISL LKVINPTTTI TLMSFEA

Arabidopsis Description

DRP1BDL1B [Source:UniProtKB/TrEMBL;Acc:A0A178VE87]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.