CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
cytosol 2
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G095510.1	Barley	cytosol	14.95	72.73
HORVU2Hr1G095500.1	Barley	cytosol	18.46	66.95
CDY50514	Canola	plastid	94.39	52.74
Bra037604.1-P	Field mustard	plastid	92.99	51.69
HORVU1Hr1G001520.1	Barley	cytosol	10.51	50.0
CDY25877	Canola	plastid	95.09	49.45
AT1G53140.1	Thale cress	plastid	86.92	45.53
KRH26094	Soybean	plastid	69.63	37.06
VIT_19s0014g02500.t01	Wine grape	plastid	72.43	36.99
KRH55251	Soybean	plastid	68.22	36.73
PGSC0003DMT400032399	Potato	plastid	69.16	35.88
Solyc07g063080.2.1	Tomato	plastid	69.16	35.71
GSMUA_Achr2P09480_001	Banana	plastid	61.45	32.15
TraesCS3A01G273500.1	Wheat	plastid	60.75	31.82
TraesCS3B01G307100.1	Wheat	plastid	60.75	31.82
TraesCS3D01G272800.1	Wheat	plastid	60.51	31.7
Os01t0748000-00	Rice	plastid	60.28	31.39
EES03602	Sorghum	plastid	59.35	30.79
HORVU3Hr1G071340.9	Barley	cytosol, plastid	60.28	30.07
Zm00001d043451_P001	Maize	plastid	57.71	30.01
Zm00001d012752_P006	Maize	plastid	57.24	29.2
CDY53047	Canola	cytosol	1.87	8.25
CDY03289	Canola	cytosol	7.48	6.06
CDY34117	Canola	cytosol	7.48	6.06
CDX67862	Canola	cytosol	8.41	5.9
CDY25074	Canola	cytosol	8.41	5.9
CDX67529	Canola	cytosol	8.18	5.74
CDX99702	Canola	cytosol	8.18	5.74
CDY13364	Canola	cytosol	8.18	5.74
CDY27661	Canola	cytosol	7.94	5.57
CDY23281	Canola	cytosol	5.14	5.56
CDY46101	Canola	cytosol	10.28	5.48
CDX72418	Canola	cytosol	10.28	5.29
CDX68994	Canola	cytosol	10.05	5.29
CDX75370	Canola	cytosol	10.28	5.24
CDY53046	Canola	cytosol	7.94	5.04
CDY33737	Canola	cytosol	7.01	4.89
CDX81675	Canola	cytosol	7.01	4.89
CDX84001	Canola	cytosol	7.01	4.89
CDY52026	Canola	cytosol	7.01	4.89
CDY48440	Canola	cytosol	9.11	4.83
CDY42672	Canola	cytosol	7.01	4.8
CDX71832	Canola	cytosol	7.01	4.8
CDY41188	Canola	cytosol	7.01	4.8
CDX89053	Canola	cytosol	7.01	4.79
CDY28314	Canola	cytosol	8.88	4.71
CDY30477	Canola	cytosol	6.78	4.69
CDY34120	Canola	cytosol	7.01	4.59
CDY24530	Canola	cytosol, nucleus, plasma membrane	6.78	4.57
CDY23444	Canola	cytosol	6.54	4.53
CDY24536	Canola	cytosol	6.78	4.43
CDX94909	Canola	mitochondrion	7.48	4.4
CDY27283	Canola	cytosol	7.01	3.93
CDY47216	Canola	cytosol	4.67	3.72
CDY33414	Canola	cytosol	6.54	3.6
CDY42203	Canola	cytosol	6.54	3.56
CDY04455	Canola	cytosol	7.48	3.49
CDY45889	Canola	cytosol	7.24	3.37
CDX93442	Canola	cytosol	7.01	3.29
CDY34897	Canola	cytosol	7.01	3.28
CDY02039	Canola	cytosol, plastid	4.21	3.22
CDY44550	Canola	cytosol	7.24	3.22
CDY20643	Canola	cytosol	4.67	3.16
CDY47217	Canola	cytosol	3.5	2.92
CDY31035	Canola	cytosol	4.21	2.88
CDX94910	Canola	cytosol	3.04	2.74
CDY53048	Canola	cytosol	2.57	2.2
CDY35023	Canola	cytosol	1.17	1.44
CDY29721	Canola	cytosol	0.47	1.29
CDY36456	Canola	cytosol	0.0	0.0
CDY35022	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDY29720	EnsemblPlantsGene:GSBRNA2T00043530001	InterPro:Dynamin_SF	ncoils:Coil	PANTHER:PTHR11566	PANTHER:PTHR11566:SF44
ProteinID:CDY29720	ProteinID:CDY29720.1	SEG:seg	UniParc:UPI0004EDD2EE	UniProt:A0A078GTC7	MapMan:35.1

Description

BnaAnng03420DBnaAnng03420D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GTC7]

Coordinates

chrLK032242:-:169141..170975

Molecular Weight (calculated)

46935.7 Da

IEP (calculated)

6.895

GRAVY (calculated)

-0.370

Length

428 amino acids

Sequence
(BLAST)

001: MLLISEKLQC YICMASISNH VGALIDGAAN PAPEQWGKTT EEERGESGIG SWPGVCLDIK PPNAVLRLYG GAACERVIHE FRCAAYSIEC PPVSREKVAN
101: ILLAHAGRGG GRGVTEASAE IARTAARSWL APLLDTACDR LAFVLGSLFE IALERNLNQN SEYEKKAENM DGCVGFYAAL RNCYSRFVKN LAKQCKQLVR
201: HHLDSVTSPY SMACYESDYH QGGSFGSYYK PNQASGIGSF CFELSDTGRD EPMKDQENIP PEKSKAQETT PGKGEETHIT VPETPSPDQP SRKRVARMGG
301: NRNIQTLGIQ NGEGGLLFGT TENGMKSSSA YTEICSSAAQ HFARIREVLV ERSVTSTLNS GFLTPGNRDR LVVALGVDLF AVNDEKFMDM FVAPRAIDVL
401: QNERQQLQKR QKILQSCLTE FKTVSRSL

Best Arabidopsis Sequence Match ( AT1G53140.1 )
(BLAST)

001: MANSNTYLTT PTKTPSSRRN QQSQSKMQSH SKDPINAESR SRFEAYNRLQ AAAVAFGEKL PIPEIVAIGG QSDGKSSLLE ALLGFRFNVR EVEMGTRRPL
101: ILQMVHDLSA LEPRCRFQDE DSEEYGSPIV SATAVADVIR SRTEALLKKT KTAVSPKPIV MRAEYAHCPN LTIIDTPGFV LKAKKGEPET TPDEILSMVK
201: SLASPPHRIL LFLQQSSVEW CSSLWLDAVR EIDSSFRRTI VVVSKFDNRL KEFSDRGEVD RYLSASGYLG ENTRPYFVAL PKDRSTISND EFRRQISQVD
301: TEVIRHLREG VKGGFDEEKF RSCIGFGSLR DFLESELQKR YKEAAPATLA LLEERCSEVT DDMLRMDMKI QATSDVAHLR KAAMLYTASI SNHVGALIDG
401: AANPAPEQWG KTTEEERGES GIGSWPGVSV DIKPPNAVLK LYGGAAFERV IHEFRCAAYS IECPPVSREK VANILLAHAG RGGGRGVTEA SAEIARTAAR
501: SWLAPLLDTA CDRLAFVLGS LFEIALERNL NQNSEYEKKT ENMDGYVGFH AAVRNCYSRF VKNLAKQCKQ LVRHHLDSVT SPYSMACYEN NYHQGGAFGA
601: YNKFNQASPN SFCFELSDTS RDEPMKDQEN IPPEKNNGQE TTPGKGGESH ITVPETPSPD QPCEIVYGLV KKEIGNGPDG VGARKRMARM VGNRNIEPFR
701: VQNGGLMFAN ADNGMKSSSA YSEICSSAAQ HFARIREVLV ERSVTSTLNS GFLTPCRDRL VVALGLDLFA VNDDKFMDMF VAPGAIVVLQ NERQQLQKRQ
801: KILQSCLTEF KTVARSL

Arabidopsis Description

DRP5ADRP5A [Source:UniProtKB/TrEMBL;Acc:A0A178WBH9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.