Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY03289 | Canola | cytosol | 100.0 | 100.0 |
| CDY53047 | Canola | cytosol | 14.58 | 79.38 |
| Bra031505.1-P | Field mustard | cytosol | 74.43 | 68.71 |
| CDY53046 | Canola | cytosol | 80.87 | 63.35 |
| CDY24536 | Canola | cytosol | 77.84 | 62.84 |
| CDY34120 | Canola | cytosol | 77.46 | 62.54 |
| CDY47216 | Canola | cytosol | 60.98 | 59.85 |
| CDY47217 | Canola | cytosol | 57.95 | 59.53 |
| CDY53048 | Canola | cytosol | 53.98 | 57.0 |
| CDY36456 | Canola | cytosol | 19.89 | 56.45 |
| KRH11082 | Soybean | cytosol | 14.96 | 54.11 |
| CDY02039 | Canola | cytosol, plastid | 55.68 | 52.59 |
| PGSC0003DMT400095128 | Potato | cytosol | 42.42 | 51.03 |
| PGSC0003DMT400088564 | Potato | cytosol | 10.98 | 47.15 |
| PGSC0003DMT400064541 | Potato | cytosol | 53.79 | 46.41 |
| PGSC0003DMT400064491 | Potato | cytosol | 33.33 | 44.44 |
| Zm00001d028497_P001 | Maize | cytosol | 50.95 | 43.11 |
| Solyc04g072030.1.1 | Tomato | cytosol | 54.73 | 42.81 |
| PGSC0003DMT400064542 | Potato | cytosol | 53.79 | 42.07 |
| TraesCS4B01G217700.1 | Wheat | cytosol | 50.0 | 41.38 |
| Os03t0260000-01 | Rice | cytosol | 52.27 | 40.71 |
| TraesCS4A01G086700.1 | Wheat | cytosol | 50.57 | 40.21 |
| Zm00001d028495_P001 | Maize | cytosol | 51.14 | 40.06 |
| TraesCS4D01G217900.1 | Wheat | cytosol | 50.19 | 39.97 |
| CDY23281 | Canola | cytosol | 29.92 | 39.9 |
| EER95148 | Sorghum | cytosol | 51.14 | 39.88 |
| PGSC0003DMT400050652 | Potato | cytosol | 46.4 | 39.84 |
| GSMUA_Achr8P19650_001 | Banana | cytosol, mitochondrion | 41.29 | 39.14 |
| HORVU4Hr1G061820.3 | Barley | plastid | 50.19 | 38.97 |
| KXG39737 | Sorghum | cytosol | 47.73 | 38.53 |
| PGSC0003DMT400072601 | Potato | cytosol | 44.51 | 37.96 |
| TraesCS4A01G213700.1 | Wheat | cytosol | 42.42 | 37.84 |
| Os04t0129900-01 | Rice | cytosol | 48.86 | 37.72 |
| TraesCS4D01G098800.1 | Wheat | cytosol | 48.67 | 37.57 |
| Solyc11g069980.1.1 | Tomato | cytosol | 51.33 | 33.92 |
| CDY24530 | Canola | cytosol, nucleus, plasma membrane | 37.5 | 31.23 |
| CDY33737 | Canola | cytosol | 21.78 | 18.73 |
| CDX81675 | Canola | cytosol | 21.78 | 18.73 |
| CDX84001 | Canola | cytosol | 21.59 | 18.57 |
| CDY52026 | Canola | cytosol | 21.59 | 18.57 |
| CDY42672 | Canola | cytosol | 21.21 | 17.92 |
| CDX89053 | Canola | cytosol | 21.21 | 17.89 |
| CDX99702 | Canola | cytosol | 20.64 | 17.87 |
| CDY27661 | Canola | cytosol | 20.64 | 17.87 |
| CDY41188 | Canola | cytosol | 21.02 | 17.76 |
| CDX71832 | Canola | cytosol | 21.02 | 17.76 |
| CDX67529 | Canola | cytosol | 20.27 | 17.54 |
| CDX67862 | Canola | cytosol | 20.08 | 17.38 |
| CDY25074 | Canola | cytosol | 20.08 | 17.38 |
| CDY23444 | Canola | cytosol | 20.27 | 17.31 |
| CDY13364 | Canola | cytosol | 19.89 | 17.21 |
| CDY30477 | Canola | cytosol | 20.08 | 17.15 |
| CDY28314 | Canola | cytosol | 21.78 | 14.27 |
| CDY48440 | Canola | cytosol | 21.78 | 14.25 |
| CDX68994 | Canola | cytosol | 21.59 | 14.02 |
| CDY46101 | Canola | cytosol | 21.02 | 13.82 |
| CDX75370 | Canola | cytosol | 21.4 | 13.45 |
| CDX72418 | Canola | cytosol | 21.02 | 13.36 |
| CDY35022 | Canola | cytosol | 7.01 | 12.89 |
| CDX94910 | Canola | cytosol | 10.8 | 12.0 |
| CDY35023 | Canola | cytosol | 7.77 | 11.82 |
| CDY29721 | Canola | cytosol | 3.22 | 10.97 |
| CDY33414 | Canola | cytosol | 15.72 | 10.68 |
| CDY20643 | Canola | cytosol | 12.69 | 10.58 |
| CDY42203 | Canola | cytosol | 15.72 | 10.56 |
| CDY31035 | Canola | cytosol | 12.31 | 10.38 |
| CDY27283 | Canola | cytosol | 14.58 | 10.09 |
| CDX94909 | Canola | mitochondrion | 13.26 | 9.63 |
| CDX93442 | Canola | cytosol | 16.48 | 9.55 |
| CDY34897 | Canola | cytosol | 16.1 | 9.29 |
| CDY25877 | Canola | plastid | 14.02 | 8.99 |
| CDY45889 | Canola | cytosol | 15.53 | 8.91 |
| CDY04455 | Canola | cytosol | 15.34 | 8.82 |
| CDY44550 | Canola | cytosol | 15.53 | 8.51 |
| CDY29720 | Canola | cytosol, extracellular | 6.06 | 7.48 |
| CDY50514 | Canola | plastid | 10.61 | 7.31 |
Protein Annotations
| Gene3D:1.20.120.1240 | Gene3D:3.40.50.300 | MapMan:35.1 | GO:A0A078ERG2 | UniProt:A0A078ERG2 | EnsemblPlants:CDY34117 |
| ProteinID:CDY34117 | ProteinID:CDY34117.1 | InterPro:Dynamin_GTPase | InterPro:Dynamin_SF | InterPro:Dynamin_central | InterPro:GED |
| InterPro:GED_dom | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 |
| GO:GO:0005525 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00056063001 | InterPro:G_DYNAMIN_dom | InterPro:IPR020850 | InterPro:IPR030381 |
| InterPro:P-loop_NTPase | PFAM:PF00350 | PFAM:PF01031 | PFAM:PF02212 | PRINTS:PR00195 | PFscan:PS51388 |
| PFscan:PS51718 | PANTHER:PTHR11566 | PANTHER:PTHR11566:SF135 | SMART:SM00053 | SMART:SM00302 | SUPFAM:SSF52540 |
| UniParc:UPI0004EE4FBA | SEG:seg | : | : | : | : |
Description
BnaC01g28570DBnaC01g28570D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ERG2]
Coordinates
chrLK032329:+:96330..97916
Molecular Weight (calculated)
59577.6 Da
IEP (calculated)
6.452
GRAVY (calculated)
-0.182
Length
528 amino acids
Sequence
(BLAST)
(BLAST)
001: MYYDAGSSKG VSDAPLTLHV KKAGAPDLTM VDLPGITRVP VKGQPENIYE QISGMIMKYI KPQESIILNV LSATVDFTTC ESIRMSRQVD KTGERTLAVV
101: TNADMAPEGL LQKVTADDVS IGLGYVCVRN RVGEETYEEA REQEELLFKT HPSLSMIDEN IVCLPVLAQK LIQIQTTMIS RCLPEIVRKI NHKMETADLE
201: LKKLPMVMTS SGDALMTLMD IIASAKESLL RILIQGDFSE FPDNHSMHGT ARLADMLSKF SDDLQAKPKQ VREFLIDEIK VLEECKCVGL PNFTPRSAFM
301: AILSQHVDDI HAKPVEFIKN IWDYIEVVLS SVITKYSENF PRVQPSIKRA GRNLMSKIKE HSVDRVIQIV EMEKLTDYTC SPEYMKSWTE KIDAQKSFVD
401: AVLNDKTKPE SFSINGFGSV KISHLREYHA HLLQQAFDMK MRITSYWKIV LRRIVDNLAL YLQLSVKYFV NTQFQKEIVA EMVDPKGGGG VERMLEESPS
501: VASKREKLEK SIKVLKESKD AVAAIVDQ
101: TNADMAPEGL LQKVTADDVS IGLGYVCVRN RVGEETYEEA REQEELLFKT HPSLSMIDEN IVCLPVLAQK LIQIQTTMIS RCLPEIVRKI NHKMETADLE
201: LKKLPMVMTS SGDALMTLMD IIASAKESLL RILIQGDFSE FPDNHSMHGT ARLADMLSKF SDDLQAKPKQ VREFLIDEIK VLEECKCVGL PNFTPRSAFM
301: AILSQHVDDI HAKPVEFIKN IWDYIEVVLS SVITKYSENF PRVQPSIKRA GRNLMSKIKE HSVDRVIQIV EMEKLTDYTC SPEYMKSWTE KIDAQKSFVD
401: AVLNDKTKPE SFSINGFGSV KISHLREYHA HLLQQAFDMK MRITSYWKIV LRRIVDNLAL YLQLSVKYFV NTQFQKEIVA EMVDPKGGGG VERMLEESPS
501: VASKREKLEK SIKVLKESKD AVAAIVDQ
001: MVKKKVATKK NSPSLAIAKK KSRSNKDVVS VEAPIISSYN DRIRPLLDTV DRLRNLNVMR EGIHLPTIVV VGDQSSGKSS VLESLAGISL PRGQGICTRV
101: PLVMRLQRSS SPEPEIWLEY NDKVVPTDEE HIAEAIRAAT DVIAGSGKGV SDAPLTLHVK KAGVPDLTMV DLPGITRVPV NGQPENIYEQ ISGMIMEYIE
201: PQESIILNVL SATVDFTTCE SIRMSRKVDK TGQRTLAVVT KADMAPEGLL QKVTADDVSI VLGYVCVRNR IGEETYEEAR MQEELLFRTH PVLSLIDEDI
301: VGIPVLAQKL MLIQSSMIAR CLPKIVSKIN QKLDTAVLEL NKLPMVMAST GEALMALMDI IGSAKESLLR ILVQGDFSEY PDDQNMHCTA RLADMLSQFS
401: DSLQAKPKEV AEFLMDEIKI LDECKCVGLP NFIPRSAFLA ILSQHVDGIQ DKPVEFINKI WDYIEDVLSS VTAKRSDNFP QIQSSIKRAG RNLISKIKEQ
501: SVNRVMEIVE MEKLTDYTCN PEYMTSWTQK TSAQESFIDA VVKNENIPDY FSVTGFGNVK ISHLRKYHAH LLIPAFDMKM RITSYWKIVL RRIVDNLALY
601: LQLSVKSLVN TRFQKEIVAE MVDPRDGGGV EKMLEESPLV ASKREKLQNS IKLLKESKDA VAAIVDQNC
101: PLVMRLQRSS SPEPEIWLEY NDKVVPTDEE HIAEAIRAAT DVIAGSGKGV SDAPLTLHVK KAGVPDLTMV DLPGITRVPV NGQPENIYEQ ISGMIMEYIE
201: PQESIILNVL SATVDFTTCE SIRMSRKVDK TGQRTLAVVT KADMAPEGLL QKVTADDVSI VLGYVCVRNR IGEETYEEAR MQEELLFRTH PVLSLIDEDI
301: VGIPVLAQKL MLIQSSMIAR CLPKIVSKIN QKLDTAVLEL NKLPMVMAST GEALMALMDI IGSAKESLLR ILVQGDFSEY PDDQNMHCTA RLADMLSQFS
401: DSLQAKPKEV AEFLMDEIKI LDECKCVGLP NFIPRSAFLA ILSQHVDGIQ DKPVEFINKI WDYIEDVLSS VTAKRSDNFP QIQSSIKRAG RNLISKIKEQ
501: SVNRVMEIVE MEKLTDYTCN PEYMTSWTQK TSAQESFIDA VVKNENIPDY FSVTGFGNVK ISHLRKYHAH LLIPAFDMKM RITSYWKIVL RRIVDNLALY
601: LQLSVKSLVN TRFQKEIVAE MVDPRDGGGV EKMLEESPLV ASKREKLQNS IKLLKESKDA VAAIVDQNC
Arabidopsis Description
DRP4CDynamin-related protein 4C [Source:UniProtKB/Swiss-Prot;Acc:Q9ZP55]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.