CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75370	Canola	cytosol	97.17	94.05
CDY46101	Canola	cytosol	91.39	92.53
CDY48440	Canola	cytosol	89.42	90.09
CDY28314	Canola	cytosol	89.18	89.95
AT4G33650.2	Thale cress	cytosol	87.95	88.38
CDX72418	Canola	cytosol	90.16	88.21
Solyc11g043200.1.1	Tomato	cytosol, nucleus	20.91	74.24
VIT_03s0038g00970.t01	Wine grape	cytosol	75.15	73.17
KRH10618	Soybean	plastid	73.31	72.42
KRH21736	Soybean	nucleus	73.06	71.91
KRH42074	Soybean	endoplasmic reticulum, nucleus	70.97	70.88
KRH49844	Soybean	plastid	70.6	70.69
KRH62781	Soybean	nucleus	68.51	68.18
Os01t0920400-01	Rice	nucleus, plastid	66.05	65.65
TraesCS3B01G465100.3	Wheat	cytosol, plastid	64.7	65.42
GSMUA_Achr10P...	Banana	cytosol	62.73	65.13
TraesCS3A01G428000.2	Wheat	cytosol, plastid	64.08	65.12
TraesCS3D01G423500.1	Wheat	cytosol	65.07	64.91
Zm00001d042338_P002	Maize	extracellular, mitochondrion	65.07	64.75
GSMUA_Achr8P08760_001	Banana	cytosol	61.25	64.68
EES04116	Sorghum	cytosol	65.07	64.59
HORVU3Hr1G094260.4	Barley	cytosol	64.7	64.54
Zm00001d012027_P002	Maize	cytosol	65.31	62.47
TraesCS5D01G082000.4	Wheat	cytosol	52.03	61.75
TraesCS2A01G281000.2	Wheat	cytosol	56.7	59.48
OQU81360	Sorghum	cytosol	55.23	59.39
TraesCS2B01G298400.1	Wheat	cytosol	56.7	59.1
TraesCS2D01G279900.2	Wheat	cytosol	56.33	59.02
Os04t0381000-01	Rice	cytosol	58.92	58.99
HORVU2Hr1G068810.3	Barley	cytosol	56.58	57.79
Zm00001d004012_P001	Maize	cytosol	51.29	38.12
CDX99702	Canola	cytosol	26.08	34.75
CDY33737	Canola	cytosol	26.2	34.69
CDX84001	Canola	cytosol	26.2	34.69
CDY52026	Canola	cytosol	26.2	34.69
CDX81675	Canola	cytosol	26.2	34.69
CDY27661	Canola	cytosol	25.95	34.59
CDY25074	Canola	cytosol	25.83	34.43
CDX67529	Canola	cytosol	25.71	34.26
CDX67862	Canola	cytosol	25.71	34.26
CDY13364	Canola	cytosol	25.71	34.26
CDY23444	Canola	cytosol	25.83	33.98
CDY35022	Canola	cytosol	11.93	33.8
CDY42672	Canola	cytosol	25.95	33.76
CDX89053	Canola	cytosol	25.83	33.55
CDY30477	Canola	cytosol	25.46	33.5
CDX71832	Canola	cytosol	25.58	33.28
CDY41188	Canola	cytosol	25.46	33.12
CDY35023	Canola	cytosol	13.41	31.41
CDY36456	Canola	cytosol	6.52	28.49
CDY47217	Canola	cytosol	17.34	27.43
CDY53048	Canola	cytosol	16.85	27.4
CDY47216	Canola	cytosol	17.84	26.95
CDY23281	Canola	cytosol	12.42	25.51
CDY02039	Canola	cytosol, plastid	17.34	25.22
CDY34120	Canola	cytosol	19.8	24.62
CDY24536	Canola	cytosol	19.8	24.62
CDY53046	Canola	cytosol	20.17	24.33
CDY34117	Canola	cytosol	14.02	21.59
CDY03289	Canola	cytosol	14.02	21.59
CDX94910	Canola	cytosol	11.93	20.42
CDY31035	Canola	cytosol	14.88	19.33
CDY20643	Canola	cytosol	14.76	18.96
CDY33414	Canola	cytosol	17.71	18.53
CDY42203	Canola	cytosol	17.71	18.32
CDX93442	Canola	cytosol	19.68	17.56
CDY34897	Canola	cytosol	19.31	17.16
CDY45889	Canola	cytosol	19.19	16.96
CDY29721	Canola	cytosol	3.2	16.77
CDY04455	Canola	cytosol	18.7	16.56
CDY27283	Canola	cytosol	15.38	16.38
CDY44550	Canola	cytosol	19.19	16.18
CDX94909	Canola	mitochondrion	14.39	16.09
CDY53047	Canola	cytosol	1.85	15.46
CDY25877	Canola	plastid	14.15	13.97
CDY50514	Canola	plastid	11.56	12.27
CDY24530	Canola	cytosol, nucleus, plasma membrane	9.1	11.67
CDY29720	Canola	cytosol, extracellular	5.29	10.05

Protein Annotations

Gene3D:1.20.120.1240	MapMan:13.6.2.1	Gene3D:2.30.29.30	Gene3D:3.40.50.300	GO:A0A078BYH9	EnsemblPlants:CDX68994
ProteinID:CDX68994	ProteinID:CDX68994.1	InterPro:Dynamin_GTPase	InterPro:Dynamin_GTPase_CS	InterPro:Dynamin_SF	InterPro:Dynamin_central
InterPro:GED	InterPro:GED_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00130744001	InterPro:G_DYNAMIN_dom	InterPro:IPR011993
InterPro:IPR020850	InterPro:IPR030381	InterPro:P-loop_NTPase	PFAM:PF00350	PFAM:PF01031	PFAM:PF02212
InterPro:PH-like_dom_sf	PRINTS:PR00195	ScanProsite:PS00410	PFscan:PS51388	PFscan:PS51718	PANTHER:PTHR11566
PANTHER:PTHR11566:SF62	SMART:SM00053	SMART:SM00302	SUPFAM:SSF52540	UniParc:UPI0004EAB972	SEG:seg

Description

BnaC01g04590D

Coordinates

chrLK031789:+:2334675..2340036

Molecular Weight (calculated)

89947.2 Da

IEP (calculated)

6.199

GRAVY (calculated)

-0.361

Length

813 amino acids

Sequence
(BLAST)

001: MSVEEATNET HPPTPPPPSS AASKAAPLGS SVIPIVNKLQ DIFAQLGSQS SIELPQVAVV GSQSSGKSSV LEALVGRDFL PRGNDICTRR PLVLQLLQTK
101: SKASGGSDDE WGEFLHLPNN RIYDFSEIRR EIEAETNRLV GENKGVSDKQ IRLKIFSPNV LDITLVDLPG ITKVPVGDQP TDIEARIRTM ILSYIKQPSC
201: LILAVTPANS DLANSDALQI AGNADPDGHR TIGVITKLDI MDRGTDARNL LLGKVVPLRL GYVGVVNRCQ EDILQNRSVK EALSAEEKFF RSRPAYHGLA
301: DRLGIPQLAK KLNQILVQHI KVLLPDLKSR ISNALVATAK EHQSYGEITE STAGQGAILL NFLSKYCEAY SSLLEGKSEE MSTSELSGGA RIHYIFQSIF
401: VKSLEEVDPC EDFTDDDIRT AIQNATGPRS ALFVPDVPFE FLVRRQISRL LDPSLQCARF IFDELVKISH KCMMNELQRF PVLRKRMDEV IGDFLREGLE
501: PSEAMIGDII DMEMDYINTS HPNFIGGTKA VEAAMENVKS SRVPHPVARP KDPVEPERTS SSSSASQVKS RSFLGRQANG IVPDQGVVSA DAEKAAPAAN
601: ANDSRWGIPS IFRGGENRAV TKENFLNKPF NEAVEDMSQN LSMIYLKEPP AVLRPSETHS EQEDIEIQIT KLLLKSYYDI VRKNIEDSVP KAIMHFLVNH
701: TKRELHNVFI KKLYRENLFE EMLQEPDEIA VKRKRTRETL HILQQAYRTL DELPMEAESV CSGGTDTTGV SKHLDLPASS SMYSTSSSSY SASPSTGRRS
801: RRAGNQHQNG YGF

Best Arabidopsis Sequence Match ( AT4G33650.1 )
(BLAST)

001: MTIEEVSGET PPSTPPSSST PSPSSSTTNA APLGSSVIPI VNKLQDIFAQ LGSQSTIALP QVVVVGSQSS GKSSVLEALV GRDFLPRGND ICTRRPLVLQ
101: LLQTKSRANG GSDDEWGEFR HLPETRFYDF SEIRREIEAE TNRLVGENKG VADTQIRLKI SSPNVLNITL VDLPGITKVP VGDQPSDIEA RIRTMILSYI
201: KQDTCLILAV TPANTDLANS DALQIASIVD PDGHRTIGVI TKLDIMDKGT DARKLLLGNV VPLRLGYVGV VNRCQEDILL NRTVKEALLA EEKFFRSHPV
301: YHGLADRLGV PQLAKKLNQI LVQHIKVLLP DLKSRISNAL VATAKEHQSY GELTESRAGQ GALLLNFLSK YCEAYSSLLE GKSEEMSTSE LSGGARIHYI
401: FQSIFVKSLE EVDPCEDLTD DDIRTAIQNA TGPRSALFVP DVPFEVLVRR QISRLLDPSL QCARFIFEEL IKISHRCMMN ELQRFPVLRK RMDEVIGDFL
501: REGLEPSEAM IGDIIDMEMD YINTSHPNFI GGTKAVEAAM HQVKSSRIPH PVARPKDTVE PDRTSSSTSQ VKSRSFLGRQ ANGIVTDQGV VSADAEKAQP
601: AANASDTRWG IPSIFRGGDT RAVTKDSLLN KPFSEAVEDM SHNLSMIYLK EPPAVLRPTE THSEQEAVEI QITKLLLRSY YDIVRKNIED SVPKAIMHFL
701: VNHTKRELHN VFIKKLYREN LFEEMLQEPD EIAVKRKRTQ ETLHVLQQAY RTLDELPLEA DSVSAGMSKH QELLTSSKYS TSSSYSASPS TTRRSRRAGD
801: QHQNGYGF

Arabidopsis Description

DRP3ANOXY15 [Source:UniProtKB/TrEMBL;Acc:A0A178UUQ6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.