Factsheet for TraesCS3B01G465100.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G428000.2	Wheat	cytosol, plastid	97.76	98.25
TraesCS3D01G423500.1	Wheat	cytosol	99.5	98.16
HORVU3Hr1G094260.4	Barley	cytosol	99.13	97.79
Os01t0920400-01	Rice	nucleus, plastid	88.31	86.8
Zm00001d042338_P002	Maize	extracellular, mitochondrion	86.32	84.94
EES04116	Sorghum	cytosol	85.82	84.25
Zm00001d012027_P002	Maize	cytosol	85.82	81.18
GSMUA_Achr10P...	Banana	cytosol	68.16	69.99
Solyc11g043200.1.1	Tomato	cytosol, nucleus	19.4	68.12
VIT_03s0038g00970.t01	Wine grape	cytosol	70.65	68.02
KRH42074	Soybean	endoplasmic reticulum, nucleus	67.79	66.95
KRH49844	Soybean	plastid	67.41	66.75
Solyc01g106050.2.1	Tomato	plastid	68.03	66.55
KRH10618	Soybean	plastid	67.91	66.34
KRH21736	Soybean	nucleus	67.79	65.98
Bra011458.1-P	Field mustard	cytosol	65.3	65.06
CDX68994	Canola	cytosol	65.42	64.7
CDY46101	Canola	cytosol	64.55	64.63
AT4G33650.2	Thale cress	cytosol	64.8	64.4
Bra036991.1-P	Field mustard	cytosol	64.3	64.06
CDY28314	Canola	cytosol	63.93	63.77
CDY48440	Canola	cytosol	63.93	63.69
Bra034579.1-P	Field mustard	cytosol	63.93	63.69
KRH62781	Soybean	nucleus	64.43	63.4
AT2G14120.3	Thale cress	cytosol, plastid	63.56	63.16
CDX75370	Canola	cytosol	65.3	62.5
CDX72418	Canola	cytosol	64.43	62.33
TraesCS2B01G298400.1	Wheat	cytosol	60.32	62.18
Solyc11g043210.1.1	Tomato	nucleus	41.67	60.8
TraesCS1B01G411700.3	Wheat	cytosol	27.24	35.96
TraesCS1B01G227700.1	Wheat	cytosol	27.24	35.04
TraesCS4B01G047700.1	Wheat	cytosol	26.37	34.75
TraesCS6B01G443600.1	Wheat	cytosol	18.78	28.87
TraesCS4B01G217700.1	Wheat	cytosol	20.77	26.18
TraesCS7B01G104500.1	Wheat	golgi, unclear	19.78	17.61
TraesCS6B01G342500.2	Wheat	cytosol	19.78	17.23
TraesCS5B01G120600.1	Wheat	cytosol	16.54	17.21
TraesCS3B01G307100.1	Wheat	plastid	17.29	17.01

Protein Annotations

Gene3D:1.20.120.1240	MapMan:13.6.2.1	Gene3D:2.30.29.30	Gene3D:3.40.50.300	InterPro:Dynamin_GTPase	InterPro:Dynamin_GTPase_CS
InterPro:Dynamin_SF	InterPro:Dynamin_central	InterPro:GED	InterPro:GED_dom	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:G_DYNAMIN_dom
InterPro:IPR011993	InterPro:IPR020850	InterPro:IPR030381	InterPro:P-loop_NTPase	PFAM:PF00350	PFAM:PF01031
PFAM:PF02212	InterPro:PH-like_dom_sf	PRINTS:PR00195	ScanProsite:PS00410	PFscan:PS51388	PFscan:PS51718
PANTHER:PTHR11566	PANTHER:PTHR11566:SF62	SMART:SM00053	SMART:SM00302	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS3B01G465100
EnsemblPlants:TraesCS3B01G465100.3	TIGR:cd08771	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3B:-:708240943..708247549

Molecular Weight (calculated)

88569.4 Da

IEP (calculated)

7.192

GRAVY (calculated)

-0.335

Length

804 amino acids

Sequence
(BLAST)

001: ASAPSPAAAA AAEAAAVVGS SVIPIVNKLQ DIFSQLGSSS TIDLPQVAVV GSQSSGKSSV LEALVGRDFL PRGSDICTRR PLVLQLVHQP RRPADAERDE
101: WGEFLHHPGR RFYEFPDIRR EIQAETDREA GGNKGVSDRQ IRLKIYSPNV LNITLVDLPG ITKVPVGDQP TDIEARIRTM ILSYIKHKTC IILAVSPANA
201: DLANSDALQM ARQADPDGSR TIGVITKLDI MDRGTDARNF LLGNVIPLRL GYVGVVNRSQ QDINSDVSVK QALAREESFF RTHPAYNGLA KHCGIPQLAK
301: KLNQILVQHI RTILPGLKAR ISSQLTAIAK EHAFYGDPVE SKAGQGAKLL NILAKYCDAF SSMVEGKNED ISTIELSGGA RIHYIFQSIF VKSLEGVDPC
401: EDVTDEDIRM AIQNATGPRS ALFVPEVPFE VLVRRQISRL LDPSLQCADF IYEELVKMSH RCLCNELQQF PILRRSMDEV IGKFLRDGLK PAQDMIAHII
501: EMEADYINTS HPSFIGGSKA VEQAQQQVRA ARLPATVVRR DGVDADRPQA SEKTQKARAL LGRTTGVNGV ITDQIQGVRS AAEAERPGSS GSGSTSFWGS
601: IFTSSEDRAH SSARGSSTNK SYASATPNLE HSFSSIQLKE PPLVLKPSES HSEQEDLEIA ITKLLLQSYY NIVRKNVEDF VPKAIMHFLV NHTKRELHNF
701: LITTLYREEL FGDILREPDE ITTKRRQIRD TLKVLQQAYK TLDEIPLEAE TVERGYSLDS DATGLPRVHG VYDGSSPYST PKQTRPRKSS HSGEQQQPFS
801: GNGF

Best Arabidopsis Sequence Match ( AT4G33650.1 )
(BLAST)

001: MTIEEVSGET PPSTPPSSST PSPSSSTTNA APLGSSVIPI VNKLQDIFAQ LGSQSTIALP QVVVVGSQSS GKSSVLEALV GRDFLPRGND ICTRRPLVLQ
101: LLQTKSRANG GSDDEWGEFR HLPETRFYDF SEIRREIEAE TNRLVGENKG VADTQIRLKI SSPNVLNITL VDLPGITKVP VGDQPSDIEA RIRTMILSYI
201: KQDTCLILAV TPANTDLANS DALQIASIVD PDGHRTIGVI TKLDIMDKGT DARKLLLGNV VPLRLGYVGV VNRCQEDILL NRTVKEALLA EEKFFRSHPV
301: YHGLADRLGV PQLAKKLNQI LVQHIKVLLP DLKSRISNAL VATAKEHQSY GELTESRAGQ GALLLNFLSK YCEAYSSLLE GKSEEMSTSE LSGGARIHYI
401: FQSIFVKSLE EVDPCEDLTD DDIRTAIQNA TGPRSALFVP DVPFEVLVRR QISRLLDPSL QCARFIFEEL IKISHRCMMN ELQRFPVLRK RMDEVIGDFL
501: REGLEPSEAM IGDIIDMEMD YINTSHPNFI GGTKAVEAAM HQVKSSRIPH PVARPKDTVE PDRTSSSTSQ VKSRSFLGRQ ANGIVTDQGV VSADAEKAQP
601: AANASDTRWG IPSIFRGGDT RAVTKDSLLN KPFSEAVEDM SHNLSMIYLK EPPAVLRPTE THSEQEAVEI QITKLLLRSY YDIVRKNIED SVPKAIMHFL
701: VNHTKRELHN VFIKKLYREN LFEEMLQEPD EIAVKRKRTQ ETLHVLQQAY RTLDELPLEA DSVSAGMSKH QELLTSSKYS TSSSYSASPS TTRRSRRAGD
801: QHQNGYGF

Arabidopsis Description

DRP3ANOXY15 [Source:UniProtKB/TrEMBL;Acc:A0A178UUQ6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.