Factsheet for VIT_03s0038g00970.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g106050.2.1	Tomato	plastid	80.12	81.39
KRH10618	Soybean	plastid	79.28	80.44
KRH21736	Soybean	nucleus	79.28	80.15
KRH49844	Soybean	plastid	77.48	79.68
Solyc11g043210.1.1	Tomato	nucleus	52.46	79.49
KRH42074	Soybean	endoplasmic reticulum, nucleus	76.77	78.75
KRH62781	Soybean	nucleus	73.89	75.52
Bra011458.1-P	Field mustard	cytosol	72.93	75.46
CDY46101	Canola	cytosol	72.34	75.22
CDX68994	Canola	cytosol	73.17	75.15
Bra036991.1-P	Field mustard	cytosol	72.22	74.72
Bra034579.1-P	Field mustard	cytosol	71.26	73.73
CDY48440	Canola	cytosol	71.26	73.73
CDY28314	Canola	cytosol	71.02	73.57
AT4G33650.2	Thale cress	cytosol	71.26	73.55
GSMUA_Achr8P08760_001	Banana	cytosol	66.95	72.6
CDX72418	Canola	cytosol	72.22	72.56
CDX75370	Canola	cytosol	72.69	72.26
AT2G14120.3	Thale cress	cytosol, plastid	68.86	71.08
Os01t0920400-01	Rice	nucleus, plastid	69.46	70.9
TraesCS3A01G428000.2	Wheat	cytosol, plastid	67.78	70.75
TraesCS3B01G465100.3	Wheat	cytosol, plastid	68.02	70.65
GSMUA_Achr10P...	Banana	cytosol	66.23	70.63
TraesCS3D01G423500.1	Wheat	cytosol	68.38	70.06
Zm00001d042338_P002	Maize	extracellular, mitochondrion	68.26	69.77
HORVU3Hr1G094260.4	Barley	cytosol	68.02	69.69
EES04116	Sorghum	cytosol	68.02	69.35
Zm00001d012027_P002	Maize	cytosol	68.26	67.06
TraesCS5D01G082000.4	Wheat	cytosol	53.29	64.96
Os04t0381000-01	Rice	cytosol	62.52	64.29
TraesCS2A01G281000.2	Wheat	cytosol	59.04	63.61
OQU81360	Sorghum	cytosol	57.25	63.23
TraesCS2D01G279900.2	Wheat	cytosol	58.68	63.14
TraesCS2B01G298400.1	Wheat	cytosol	58.92	63.08
VIT_04s0008g07010.t01	Wine grape	cytosol	48.26	62.19
HORVU2Hr1G068810.3	Barley	cytosol	58.8	61.68
Zm00001d004012_P001	Maize	cytosol	52.69	40.22
VIT_01s0011g05800.t01	Wine grape	cytosol	27.31	37.19
VIT_02s0012g00740.t01	Wine grape	cytosol	26.95	36.7
VIT_15s0021g00480.t01	Wine grape	cytosol	26.71	36.03
VIT_02s0025g01570.t01	Wine grape	cytosol, extracellular	25.87	35.47
VIT_15s0046g00470.t01	Wine grape	cytosol	25.99	35.34
VIT_00s0267g00020.t01	Wine grape	cytosol	4.55	24.2
VIT_15s0107g00170.t01	Wine grape	cytosol	6.59	23.4
VIT_19s0015g02240.t01	Wine grape	golgi, mitochondrion, plasma membrane	6.59	20.75
VIT_18s0089g00350.t01	Wine grape	cytosol	20.0	17.94
VIT_12s0035g01740.t01	Wine grape	cytosol	19.76	17.93
VIT_12s0055g00490.t01	Wine grape	cytosol	16.17	17.46
VIT_19s0014g02500.t01	Wine grape	plastid	14.97	14.92
VIT_03s0038g00540.t01	Wine grape	cytosol	2.63	12.5
VIT_02s0087g00010.t01	Wine grape	cytosol	2.75	12.37
VIT_03s0110g00120.t01	Wine grape	cytosol	3.59	12.15

Protein Annotations

Gene3D:1.20.120.1240	EntrezGene:100243718	wikigene:100243718	MapMan:13.6.2.1	Gene3D:2.30.29.30	Gene3D:3.40.50.300
ProteinID:CCB60910	ProteinID:CCB60910.1	ncoils:Coil	InterPro:Dynamin_GTPase	InterPro:Dynamin_GTPase_CS	InterPro:Dynamin_SF
InterPro:Dynamin_central	UniProt:F6I1U3	EMBL:FN596515	InterPro:GED	InterPro:GED_dom	GO:GO:0000166
GO:GO:0000266	GO:GO:0003674	GO:GO:0003676	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005515	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	InterPro:G_DYNAMIN_dom
InterPro:IPR011993	InterPro:IPR020850	InterPro:IPR030381	EntrezGene:LOC100243718	wikigene:LOC100243718	InterPro:P-loop_NTPase
PFAM:PF00350	PFAM:PF01031	PFAM:PF02212	InterPro:PH-like_dom_sf	PRINTS:PR00195	ScanProsite:PS00410
PFscan:PS51388	PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF62	SMART:SM00053	SMART:SM00302
SUPFAM:SSF52540	TIGR:TC68608	UniParc:UPI000210AAA7	ArrayExpress:VIT_03s0038g00970	EnsemblPlantsGene:VIT_03s0038g00970	EnsemblPlants:VIT_03s0038g00970.t01
unigene:Vvi.9271	RefSeq:XP_002269774	RefSeq:XP_002269774.2	SEG:seg	:	:

Description

No Description!

Coordinates

chr3_random:+:764974..779474

Molecular Weight (calculated)

91989.3 Da

IEP (calculated)

7.021

GRAVY (calculated)

-0.311

Length

835 amino acids

Sequence
(BLAST)

001: MAEEAVSSNP THSSSSAAPL GHSVIPIVNK LQDIFAQLGS QSTIELPQVA VVGSQSSGKS SVLEALVGRD FLPRGSDICT RRPLVLQLLQ TKRRPDGSEE
101: EYGEFLHLPG KKFFDFSEIR REIQAETDRE AGENKGVSDK QIRLKIFSPN VLDITLVDLP GITKVPVGDQ PSDIEARIRT MIMSYIKLPS CLILAVTPAN
201: SDLANSDALQ IAGNADPDGY RTIGVITKLD IMDRGTDARN LLLGKVIPLR LGYIGVVNRS QEDIIMNRSV KDALVAEEKF FRSRPVYNGL ADRCGITQLA
301: KKLNQILVQH IKTVLPGLKL RMNSALVSVA KEHASIGEIP ESKACRTAGQ GALLLNILSK YAEAFSSRVE GKNEEMSTAE LSGGARIHYI FQSIFVKSLE
401: EVDPCEDLTD DDIRTAIQNA TGPRSALFVP EVPFEVLVRR QIARLLDPSL QCARFIYDEL VKISHRCLVS EMQRFPILRK RMDEVMGNFL REGLEPSETM
501: IGHIIEMEMD YINTSHPNFI GGSKAVEMAL QQIKSSRLPV PVARQKDGLE PDKAPTSERS LKARAILARP VNGIVADQGV RPVADVEKFT SSGSTTGSSW
601: GISSIFGGSD NRVSAKEIST NKTYSEPVQS VEHSISMIHL KEPPTILKPS ESHSEQEAIE ISVTKLLLRS YYDIVRKNIE DAVPKAIMHF LVNHTKRELH
701: NVFIRKLYRE NLFEEMLQEP DEVAMKRKRT SETLRVLQQA LRTLDELPQE AETVEKGYSL GSSDPTGLPK IHGLPTSSLY TTSGGSTQSY TASPKNPKSR
801: KSSHSGELQS PFHGNADSNG GGRSYMPGLY PTLDA

Best Arabidopsis Sequence Match ( AT4G33650.1 )
(BLAST)

001: MTIEEVSGET PPSTPPSSST PSPSSSTTNA APLGSSVIPI VNKLQDIFAQ LGSQSTIALP QVVVVGSQSS GKSSVLEALV GRDFLPRGND ICTRRPLVLQ
101: LLQTKSRANG GSDDEWGEFR HLPETRFYDF SEIRREIEAE TNRLVGENKG VADTQIRLKI SSPNVLNITL VDLPGITKVP VGDQPSDIEA RIRTMILSYI
201: KQDTCLILAV TPANTDLANS DALQIASIVD PDGHRTIGVI TKLDIMDKGT DARKLLLGNV VPLRLGYVGV VNRCQEDILL NRTVKEALLA EEKFFRSHPV
301: YHGLADRLGV PQLAKKLNQI LVQHIKVLLP DLKSRISNAL VATAKEHQSY GELTESRAGQ GALLLNFLSK YCEAYSSLLE GKSEEMSTSE LSGGARIHYI
401: FQSIFVKSLE EVDPCEDLTD DDIRTAIQNA TGPRSALFVP DVPFEVLVRR QISRLLDPSL QCARFIFEEL IKISHRCMMN ELQRFPVLRK RMDEVIGDFL
501: REGLEPSEAM IGDIIDMEMD YINTSHPNFI GGTKAVEAAM HQVKSSRIPH PVARPKDTVE PDRTSSSTSQ VKSRSFLGRQ ANGIVTDQGV VSADAEKAQP
601: AANASDTRWG IPSIFRGGDT RAVTKDSLLN KPFSEAVEDM SHNLSMIYLK EPPAVLRPTE THSEQEAVEI QITKLLLRSY YDIVRKNIED SVPKAIMHFL
701: VNHTKRELHN VFIKKLYREN LFEEMLQEPD EIAVKRKRTQ ETLHVLQQAY RTLDELPLEA DSVSAGMSKH QELLTSSKYS TSSSYSASPS TTRRSRRAGD
801: QHQNGYGF

Arabidopsis Description

DRP3ANOXY15 [Source:UniProtKB/TrEMBL;Acc:A0A178UUQ6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.