Factsheet for TraesCS2B01G298400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G279900.2	Wheat	cytosol	98.33	98.84
TraesCS2A01G281000.2	Wheat	cytosol	97.05	97.68
HORVU2Hr1G068810.3	Barley	cytosol	97.18	95.23
OQU81360	Sorghum	cytosol	77.05	79.5
Os04t0381000-01	Rice	cytosol	82.56	79.31
Solyc11g043200.1.1	Tomato	cytosol, nucleus	19.87	67.69
GSMUA_Achr8P08760_001	Banana	cytosol	61.15	61.95
TraesCS3B01G465100.3	Wheat	cytosol, plastid	62.18	60.32
KRH42074	Soybean	endoplasmic reticulum, nucleus	62.44	59.83
KRH49844	Soybean	plastid	62.18	59.73
Solyc01g106050.2.1	Tomato	plastid	62.56	59.37
KRH10618	Soybean	plastid	62.56	59.3
VIT_03s0038g00970.t01	Wine grape	cytosol	63.08	58.92
KRH21736	Soybean	nucleus	62.31	58.84
KRH62781	Soybean	nucleus	60.13	57.41
Bra011458.1-P	Field mustard	cytosol	59.23	57.25
CDY46101	Canola	cytosol	58.72	57.04
CDX68994	Canola	cytosol	59.1	56.7
Bra036991.1-P	Field mustard	cytosol	58.46	56.51
CDY48440	Canola	cytosol	57.44	55.51
Bra034579.1-P	Field mustard	cytosol	57.44	55.51
CDY28314	Canola	cytosol	57.31	55.46
AT2G14120.3	Thale cress	cytosol, plastid	57.18	55.13
AT4G33650.2	Thale cress	cytosol	57.05	55.01
CDX75370	Canola	cytosol	59.23	55.0
CDX72418	Canola	cytosol	58.33	54.75
Solyc11g043210.1.1	Tomato	nucleus	36.67	51.91
Zm00001d004012_P001	Maize	cytosol	69.87	49.82
TraesCS1B01G411700.3	Wheat	cytosol	26.79	34.32
TraesCS1B01G227700.1	Wheat	cytosol	27.44	34.24
TraesCS4B01G047700.1	Wheat	cytosol	26.67	34.1
TraesCS6B01G443600.1	Wheat	cytosol	19.49	29.06
TraesCS4B01G217700.1	Wheat	cytosol	19.62	23.98
TraesCS7B01G104500.1	Wheat	golgi, unclear	20.51	17.72
TraesCS6B01G342500.2	Wheat	cytosol	20.51	17.33
TraesCS5B01G120600.1	Wheat	cytosol	16.03	16.17
TraesCS3B01G307100.1	Wheat	plastid	16.79	16.03

Protein Annotations

Gene3D:1.20.120.1240	MapMan:13.6.2.1	Gene3D:2.30.29.30	Gene3D:3.40.50.300	InterPro:Dynamin_GTPase	InterPro:Dynamin_SF
InterPro:Dynamin_central	InterPro:GED	InterPro:GED_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:G_DYNAMIN_dom	InterPro:IPR011993
InterPro:IPR020850	InterPro:IPR030381	InterPro:P-loop_NTPase	PFAM:PF00350	PFAM:PF01031	PFAM:PF02212
InterPro:PH-like_dom_sf	PRINTS:PR00195	PFscan:PS51388	PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF62
SMART:SM00053	SMART:SM00302	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS2B01G298400	EnsemblPlants:TraesCS2B01G298400.1	TIGR:cd08771
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2B:-:417793191..417804841

Molecular Weight (calculated)

85634.9 Da

IEP (calculated)

7.448

GRAVY (calculated)

-0.274

Length

780 amino acids

Sequence
(BLAST)

001: MADSAAAAAA AAAQPATVGQ AVIPLVNRLQ DIMARLDGDA AAGVELPQVA AIGGQSSGKS SVLEALVGRD FLPRGPEICT RRPLVLQLVR HSAPEEWGEF
101: LHAPGRRFDD FEHIKREIQS ETDKEAGGNK GVSDKQIRLK IFSPNVIDIT LVDLPGITRV PVGDQPSDIE SRIRTMIMQY IKHPSCIILA VSPANADLAN
201: SDALQLARLG DPDGSRTIGV ITKLDIMDRG TDARNFLLGN VIPLKLGYVG IVNRSQEDIN FNRSIKDALA FEEKFFSTLP VCLEPAYHGL SQCCGVPQLA
301: KKLNMILLKH ITDMLPGLKS RINAQLVAVA KEHAAYGDTA ESTAGQGVKL LNILGKYCEA FSSMVEGKNK VSTDQLSGGA RIHYIFQSIF VKSLEEIDPC
401: KNISDEDIRT SIQNSDGPKG AMFLPEVPFE ILVRKQIGRL LDPSLQCAKF IYDELVKISH GCLTSELQKY PILKRRMGES VSNFLRDGLR PAETMITHII
501: EMEMDYINTS HSSFVGGSKV VELAKHEGLS SRGPTSLSVH KDGVGISSEA QLKSSTENNV QIKSERGQKS RAVFARDTSR GATAEKGFQP DTDAGTSVAG
601: GGQNGHSLVS GSLSSMSDPR GYSLNSLYSM IRLREPPSTL KPSENKTDRD RTEIAIVKLL VKSYYDIVRK SIEDAVPKAI MHFLVNHTKR ELHNVLIRKL
701: YRESLFDDML RETDEVLIRR QRIQETLQVL EQAHRTLEEF PLEAEKLERG YSISEYGTGL PKIPGLSNRN PRGSSLNLYS

Best Arabidopsis Sequence Match ( AT2G14120.1 )
(BLAST)

001: MSVDDLPPSS ASAVTPLGSS VIPIVNKLQD IFAQLGSQST IALPQVAVVG SQSSGKSSVL EALVGRDFLP RGNDICTRRP LRLQLVQTKP SSDGGSDEEW
101: GEFLHHDPVR RIYDFSEIRR EIEAETNRVS GENKGVSDIP IGLKIFSPNV LDISLVDLPG ITKVPVGDQP SDIEARIRTM ILTYIKEPSC LILAVSPANT
201: DLANSDALQI AGNADPDGHR TIGVITKLDI MDRGTDARNH LLGKTIPLRL GYVGVVNRSQ EDILMNRSIK DALVAEEKFF RSRPVYSGLT DRLGVPQLAK
301: KLNQVLVQHI KALLPSLKSR INNALFATAK EYESYGDITE SRGGQGALLL SFITKYCEAY SSTLEGKSKE MSTSELSGGA RILYIFQSVF VKSLEEVDPC
401: EDLTADDIRT AIQNATGPRS ALFVPDVPFE VLVRRQISRL LDPSLQCARF IFDELVKISH QCMMKELQRF PVLQKRMDEV IGNFLREGLE PSQAMIRDLI
501: EMEMDYINTS HPNFIGGTKA VEQAMQTVKS SRIPHPVARP RDTVEPERTA SSGSQIKTRS FLGRQANGII TDQAVPTAAD AERPAPAGST SWSGFSSIFR
601: GSDGQAAAKN NLLNKPFSET TQEVYQNLST IYLKEPPTIL KSSETHSEQE SVEIEITKLL LKSYYDIVRK NVEDLVPKAI MHFLVNYTKR ELHNVFIEKL
701: YRENLIEELL KEPDELAIKR KRTQETLRIL QQANRTLDEL PLEAESVERG YKIGSEAKHE ELPGTRRSRT ETNGNGRLHM

Arabidopsis Description

DRP3BDynamin related protein [Source:UniProtKB/TrEMBL;Acc:F4IFG2]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.