Factsheet for TraesCS4B01G217700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G086700.1	Wheat	cytosol	93.89	90.21
TraesCS4D01G217900.1	Wheat	cytosol	83.07	79.94
Os03t0260000-01	Rice	cytosol	83.39	78.47
HORVU4Hr1G061820.3	Barley	plastid	82.92	77.79
KXG39737	Sorghum	cytosol	77.74	75.84
Zm00001d028497_P001	Maize	cytosol	71.0	72.6
AT1G60530.1	Thale cress	cytosol	30.09	63.79
CDY36456	Canola	cytosol	17.08	58.6
GSMUA_Achr8P19650_001	Banana	cytosol, mitochondrion	50.16	57.45
CDY53048	Canola	cytosol	43.26	55.2
KRH21193	Soybean	cytosol	42.63	54.84
CDY47217	Canola	cytosol	44.04	54.67
PGSC0003DMT400064542	Potato	cytosol	57.68	54.52
Solyc04g072030.1.1	Tomato	cytosol	57.68	54.52
KRH11082	Soybean	cytosol	12.38	54.11
CDY47216	Canola	cytosol	45.3	53.72
KRH21190	Soybean	cytosol	55.33	53.08
KRH42928	Soybean	cytosol	48.9	52.09
PGSC0003DMT400050652	Potato	cytosol	50.16	52.03
CDY34120	Canola	cytosol	53.29	51.99
PGSC0003DMT400072601	Potato	cytosol	50.31	51.86
CDY24536	Canola	cytosol	53.13	51.83
PGSC0003DMT400095128	Potato	cytosol	35.58	51.71
Bra031502.1-P	Field mustard	cytosol	52.98	51.68
CDY53046	Canola	cytosol	54.23	51.34
Bra027151.1-P	Field mustard	cytosol	54.23	51.26
Bra031505.1-P	Field mustard	cytosol	45.92	51.22
PGSC0003DMT400088564	Potato	cytosol	9.87	51.22
AT1G60500.1	Thale cress	mitochondrion	53.45	50.97
KRH59040	Soybean	cytosol	53.92	50.96
PGSC0003DMT400064541	Potato	cytosol	48.75	50.82
CDY02039	Canola	cytosol, plastid	43.89	50.09
CDY03289	Canola	cytosol	41.38	50.0
CDY34117	Canola	cytosol	41.38	50.0
Bra010250.1-P	Field mustard	cytosol	29.78	48.1
PGSC0003DMT400065607	Potato	cytosol	15.05	46.83
CDY23281	Canola	cytosol	29.0	46.72
PGSC0003DMT400064491	Potato	cytosol	27.9	44.95
Solyc11g069980.1.1	Tomato	cytosol	55.33	44.18
CDY53047	Canola	cytosol	5.96	39.18
PGSC0003DMT400094747	Potato	cytosol	20.22	31.23
Bra031511.1-P	Field mustard	cytosol	25.39	26.21
CDY24530	Canola	cytosol, nucleus, plasma membrane	25.86	26.03
TraesCS1B01G411700.3	Wheat	cytosol	24.61	25.78
TraesCS4B01G047700.1	Wheat	cytosol	24.61	25.74
TraesCS1B01G227700.1	Wheat	cytosol	23.2	23.68
TraesCS3B01G465100.3	Wheat	cytosol, plastid	26.18	20.77
TraesCS6B01G443600.1	Wheat	cytosol	16.3	19.89
TraesCS2B01G298400.1	Wheat	cytosol	23.98	19.62
TraesCS5B01G120600.1	Wheat	cytosol	18.03	14.88
TraesCS3B01G307100.1	Wheat	plastid	17.55	13.71
TraesCS7B01G104500.1	Wheat	golgi, unclear	16.77	11.85
TraesCS6B01G342500.2	Wheat	cytosol	16.3	11.27

Protein Annotations

Gene3D:1.20.120.1240	Gene3D:3.40.50.300	MapMan:35.1	InterPro:Dynamin_GTPase	InterPro:Dynamin_SF	InterPro:Dynamin_central
InterPro:GED	InterPro:GED_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:G_DYNAMIN_dom	InterPro:IPR020850	InterPro:IPR030381
InterPro:P-loop_NTPase	PFAM:PF00350	PFAM:PF01031	PFAM:PF02212	PRINTS:PR00195	PFscan:PS51388
PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF135	SMART:SM00053	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS4B01G217700
EnsemblPlants:TraesCS4B01G217700.1	TIGR:cd08771	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4B:-:459073746..459075725

Molecular Weight (calculated)

71065.5 Da

IEP (calculated)

5.623

GRAVY (calculated)

-0.084

Length

638 amino acids

Sequence
(BLAST)

001: MVLRDPTAAA AASDVTGSAI AASYNDQIRP LLDAVDRLRH LKVTQEGIQL PTIVVVGDQS SGKSSVLESL AGISLPRGQG ICTRVPLVMR LQDDPSADSP
101: VLQLEYSNCR VVTTTEANIA GSGKGISDAP ITLVVRKRGV PDLTLVDLPG ITRVPVKGQP EDIYDQIAKI IKDYISPKES IILNVLSATV DFPTCQSIRM
201: SQQVDRTGER TLAVVTKVDK SPEGLLEKVT MDDVNIGLGY VCVRNRIGDE TYDQARVEEE KLFKYHPLLS KIEKSMVGIP VLAQRLMQIQ ATIIAKCLPD
301: IVKQINDRLS RSSTELNQIP PDLVGVADAV REFIRIILVR GEFDEFPDDF HFHGTARIAE MLNAYAKKLP VEVPGRGNLF LMEEVRVLEE TKGVNLPNFL
401: PRSAFQVLRK EKVETVMQIP HDLVNEVWEY VEDLVSKVVL QHADNFPQVQ SSCRRAVQML MEKARARSAQ HIEELIEMEL VADFTANPEY MKTWYEIMEG
501: HEKFMEAVVD TSKPTLLNLV GFGEVDVSHL RVNSELAGQA FDLSARLTAY WKIIVLRLID GLALHVLRGV KRLVESDLER ELSDELLGNK LARVERMLMP
601: SPGTGTKRER LKKIIVLLRQ SKEVVANIMD RISASGEI

Best Arabidopsis Sequence Match ( AT1G60500.1 )
(BLAST)

001: MVKKKVATKK NSPSLAIAKK KSRSNKDVVS VEAPIISSYN DRIRPLLDTV DRLRNLNVMR EGIHLPTIVV VGDQSSGKSS VLESLAGISL PRGQGICTRV
101: PLVMRLQRSS SPEPEIWLEY NDKVVPTDEE HIAEAIRAAT DVIAGSGKGV SDAPLTLHVK KAGVPDLTMV DLPGITRVPV NGQPENIYEQ ISGMIMEYIE
201: PQESIILNVL SATVDFTTCE SIRMSRKVDK TGQRTLAVVT KADMAPEGLL QKVTADDVSI VLGYVCVRNR IGEETYEEAR MQEELLFRTH PVLSLIDEDI
301: VGIPVLAQKL MLIQSSMIAR CLPKIVSKIN QKLDTAVLEL NKLPMVMAST GEALMALMDI IGSAKESLLR ILVQGDFSEY PDDQNMHCTA RLADMLSQFS
401: DSLQAKPKEV AEFLMDEIKI LDECKCVGLP NFIPRSAFLA ILSQHVDGIQ DKPVEFINKI WDYIEDVLSS VTAKRSDNFP QIQSSIKRAG RNLISKIKEQ
501: SVNRVMEIVE MEKLTDYTCN PEYMTSWTQK TSAQESFIDA VVKNENIPDY FSVTGFGNVK ISHLRKYHAH LLIPAFDMKM RITSYWKIVL RRIVDNLALY
601: LQLSVKSLVN TRFQKEIVAE MVDPRDGGGV EKMLEESPLV ASKREKLQNS IKLLKESKDA VAAIVDQNC

Arabidopsis Description

DRP4CDynamin-related protein 4C [Source:UniProtKB/Swiss-Prot;Acc:Q9ZP55]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.