Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400065607 | Potato | cytosol | 55.28 | 33.17 |
| AT1G60530.1 | Thale cress | cytosol | 61.79 | 25.25 |
| CDY36456 | Canola | cytosol | 30.08 | 19.89 |
| KRH21193 | Soybean | cytosol | 63.41 | 15.73 |
| CDY53048 | Canola | cytosol | 60.98 | 15.0 |
| Bra010250.1-P | Field mustard | cytosol | 47.97 | 14.94 |
| PGSC0003DMT400050652 | Potato | cytosol | 73.17 | 14.63 |
| CDY47217 | Canola | cytosol | 60.98 | 14.59 |
| CDY47216 | Canola | cytosol | 61.79 | 14.13 |
| CDY23281 | Canola | cytosol | 44.72 | 13.89 |
| PGSC0003DMT400064541 | Potato | cytosol | 65.85 | 13.24 |
| Bra031505.1-P | Field mustard | cytosol | 60.98 | 13.11 |
| GSMUA_Achr8P19650_001 | Banana | cytosol, mitochondrion | 57.72 | 12.75 |
| PGSC0003DMT400064542 | Potato | cytosol | 68.29 | 12.44 |
| KRH42928 | Soybean | cytosol | 59.35 | 12.19 |
| KRH21190 | Soybean | cytosol | 65.04 | 12.03 |
| CDY02039 | Canola | cytosol, plastid | 53.66 | 11.81 |
| KRH59040 | Soybean | cytosol | 64.23 | 11.7 |
| Zm00001d028497_P001 | Maize | cytosol | 59.35 | 11.7 |
| AT1G60500.1 | Thale cress | mitochondrion | 63.41 | 11.66 |
| CDY34120 | Canola | cytosol | 61.79 | 11.62 |
| CDY24536 | Canola | cytosol | 61.79 | 11.62 |
| Bra031502.1-P | Field mustard | cytosol | 61.79 | 11.62 |
| KXG39737 | Sorghum | cytosol | 60.16 | 11.31 |
| Bra027151.1-P | Field mustard | cytosol | 60.98 | 11.11 |
| CDY34117 | Canola | cytosol | 47.15 | 10.98 |
| CDY03289 | Canola | cytosol | 47.15 | 10.98 |
| HORVU4Hr1G061820.3 | Barley | plastid | 60.16 | 10.88 |
| TraesCS4D01G217900.1 | Wheat | cytosol | 58.54 | 10.86 |
| CDY53046 | Canola | cytosol | 59.35 | 10.83 |
| Zm00001d028495_P001 | Maize | cytosol | 59.35 | 10.83 |
| Os03t0260000-01 | Rice | cytosol | 59.35 | 10.77 |
| TraesCS4A01G213700.1 | Wheat | cytosol | 51.22 | 10.64 |
| Os04t0129900-01 | Rice | cytosol | 58.54 | 10.53 |
| EER95148 | Sorghum | cytosol | 57.72 | 10.49 |
| TraesCS4D01G098800.1 | Wheat | cytosol | 56.1 | 10.09 |
| TraesCS4B01G217700.1 | Wheat | cytosol | 51.22 | 9.87 |
| TraesCS4A01G086700.1 | Wheat | cytosol | 52.85 | 9.79 |
| PGSC0003DMT400095128 | Potato | cytosol | 30.89 | 8.66 |
| PGSC0003DMT400051417 | Potato | cytosol | 27.64 | 6.15 |
| PGSC0003DMT400000646 | Potato | cytosol | 30.08 | 6.07 |
| PGSC0003DMT400004319 | Potato | cytosol | 29.27 | 5.86 |
| PGSC0003DMT400072601 | Potato | cytosol | 27.64 | 5.49 |
| PGSC0003DMT400028286 | Potato | cytosol | 26.02 | 5.23 |
| PGSC0003DMT400004655 | Potato | cytosol | 25.2 | 5.08 |
| KRH11082 | Soybean | cytosol | 4.07 | 3.42 |
| Bra031511.1-P | Field mustard | cytosol | 15.45 | 3.07 |
| CDY24530 | Canola | cytosol, nucleus, plasma membrane | 15.45 | 3.0 |
| PGSC0003DMT400032399 | Potato | plastid | 17.07 | 2.55 |
| PGSC0003DMT400014025 | Potato | cytosol | 13.82 | 2.2 |
| PGSC0003DMT400064491 | Potato | cytosol | 4.07 | 1.26 |
| PGSC0003DMT400094747 | Potato | cytosol | 4.07 | 1.21 |
| CDY53047 | Canola | cytosol | 0.0 | 0.0 |
| PGSC0003DMT400004228 | Potato | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400088564 | EnsemblPlantsGene:PGSC0003DMG400038135 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005525 | InterPro:Dynamin_SF | InterPro:G_DYNAMIN_dom | InterPro:IPR030381 | InterPro:P-loop_NTPase | PANTHER:PTHR11566 |
| PANTHER:PTHR11566:SF135 | PFAM:PF00350 | PFscan:PS51718 | PGSC:PGSC0003DMG400038135 | SUPFAM:SSF52540 | UniParc:UPI0002949472 |
| UniProt:M1DG89 | MapMan:35.1 | : | : | : | : |
Description
Interferon-induced GTP-binding protein mx [Source:PGSC_GENE;Acc:PGSC0003DMG400038135]
Coordinates
chr11:+:42315179..42315550
Molecular Weight (calculated)
13396.3 Da
IEP (calculated)
4.813
GRAVY (calculated)
0.176
Length
123 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPKFTLECN GKSVPTDEFH VAEAIILATN EIAGHGKGIS NIPLTLIVKK NGVPDLTMVD LPGIPTVPVH GNSTDNFEQI SEIVMKYITP EESIIVNVLS
101: ATVDFSTCEC FKMTTLFSPS KFL
101: ATVDFSTCEC FKMTTLFSPS KFL
001: MGGSKMSNDY EIDVEAGMSS LSIVNTPIEA PIVSSYNDRI RPLLDTVDRL RNLNVMREGI QLPTIVVVGD QSSGKSSVLE SLAGINLPRG QGICTRVPLV
101: MRLQRSSSPE PEIWLEYSDK VVPTDEEHVA EAICAATDVI AGTGEGVSDT PLTLSVKKNN VPDLTMVDLP GITRVPVNGQ PENIYEQISR MIMKYIEPQE
201: SIILNVLSAT VDFTTCESIR MSRQVDKTGE RTLAVVTKAD MAPEGLLQKV TADDVSIGLG YICVRNRIGE ETYEEARVQE DLLFRTHPLL SLIDGDIVGI
301: L
101: MRLQRSSSPE PEIWLEYSDK VVPTDEEHVA EAICAATDVI AGTGEGVSDT PLTLSVKKNN VPDLTMVDLP GITRVPVNGQ PENIYEQISR MIMKYIEPQE
201: SIILNVLSAT VDFTTCESIR MSRQVDKTGE RTLAVVTKAD MAPEGLLQKV TADDVSIGLG YICVRNRIGE ETYEEARVQE DLLFRTHPLL SLIDGDIVGI
301: L
Arabidopsis Description
DRP4APutative dynamin-related protein 4A [Source:UniProtKB/Swiss-Prot;Acc:Q9ZP56]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.