Factsheet for TraesCS4D01G098800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G213700.1	Wheat	cytosol	79.97	92.4
TraesCS4D01G217900.1	Wheat	cytosol	73.39	75.72
AT1G60530.1	Thale cress	cytosol	28.36	64.45
CDY36456	Canola	cytosol	16.52	60.75
GSMUA_Achr8P19650_001	Banana	cytosol, mitochondrion	47.22	57.99
PGSC0003DMT400088564	Potato	cytosol	10.09	56.1
CDY47217	Canola	cytosol	41.23	54.86
KRH21193	Soybean	cytosol	39.47	54.44
CDY53048	Canola	cytosol	39.77	54.4
CDY47216	Canola	cytosol	42.11	53.53
PGSC0003DMT400064542	Potato	cytosol	52.78	53.48
Solyc04g072030.1.1	Tomato	cytosol	52.78	53.48
KRH11082	Soybean	cytosol	11.26	52.74
KRH21190	Soybean	cytosol	50.88	52.33
KRH42928	Soybean	cytosol	45.76	52.25
PGSC0003DMT400050652	Potato	cytosol	46.78	52.03
CDY53046	Canola	cytosol	50.73	51.48
CDY34120	Canola	cytosol	49.12	51.38
PGSC0003DMT400072601	Potato	cytosol	46.49	51.37
KRH59040	Soybean	cytosol	50.58	51.26
CDY24536	Canola	cytosol	48.98	51.22
Bra031502.1-P	Field mustard	cytosol	48.83	51.07
Bra027151.1-P	Field mustard	cytosol	50.29	50.96
Bra031505.1-P	Field mustard	cytosol	42.4	50.7
CDY02039	Canola	cytosol, plastid	41.37	50.63
AT1G60500.1	Thale cress	mitochondrion	49.42	50.52
PGSC0003DMT400064541	Potato	cytosol	45.03	50.33
PGSC0003DMT400095128	Potato	cytosol	32.16	50.11
Bra010250.1-P	Field mustard	cytosol	28.22	48.86
PGSC0003DMT400065607	Potato	cytosol	14.62	48.78
CDY34117	Canola	cytosol	37.57	48.67
CDY03289	Canola	cytosol	37.57	48.67
CDY23281	Canola	cytosol	27.49	47.47
Solyc11g069980.1.1	Tomato	cytosol	51.46	44.06
PGSC0003DMT400064491	Potato	cytosol	25.29	43.69
CDY53047	Canola	cytosol	5.85	41.24
PGSC0003DMT400094747	Potato	cytosol	19.3	31.96
TraesCS1D01G393000.2	Wheat	cytosol	22.66	25.45
TraesCS4D01G047600.1	Wheat	golgi, nucleus, unclear	22.66	25.41
Bra031511.1-P	Field mustard	cytosol	22.81	25.24
CDY24530	Canola	cytosol, nucleus, plasma membrane	23.39	25.24
TraesCS1D01G216700.2	Wheat	cytosol	22.08	24.16
TraesCS3D01G423500.1	Wheat	cytosol	25.58	21.47
TraesCS5D01G082000.4	Wheat	cytosol	21.34	21.31
TraesCS6D01G385300.1	Wheat	cytosol	14.47	20.0
TraesCS2D01G279900.2	Wheat	cytosol	22.66	19.97
TraesCS5D01G124800.1	Wheat	cytosol	17.98	15.91
TraesCS3D01G272800.1	Wheat	plastid	17.54	14.69
TraesCS6D01G291700.1	Wheat	nucleus	15.79	11.96
TraesCS7D01G200900.1	Wheat	golgi, unclear	15.79	11.96

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	InterPro:Dynamin_GTPase	InterPro:Dynamin_SF	InterPro:Dynamin_central	InterPro:GED
InterPro:GED_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0016787	InterPro:G_DYNAMIN_dom	InterPro:IPR020850	InterPro:IPR030381	InterPro:P-loop_NTPase
PFAM:PF00350	PFAM:PF01031	PFAM:PF02212	PRINTS:PR00195	PFscan:PS51388	PFscan:PS51718
PANTHER:PTHR11566	PANTHER:PTHR11566:SF135	SMART:SM00053	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS4D01G098800	EnsemblPlants:TraesCS4D01G098800.1
TIGR:cd08771	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4D:-:75552857..75554911

Molecular Weight (calculated)

75448.0 Da

IEP (calculated)

6.576

GRAVY (calculated)

-0.212

Length

684 amino acids

Sequence
(BLAST)

001: MRCQPAPELR DSSLFDSIYA GNMAKPKAKR LKSFPNDAAA ADGVAASAIA SSYNDHIRPL LDAVDRLRHL NVSQEGIQLP TIVVVGDQSS GRSSVLESLA
101: GISLPRGQGI CTRAPLVMRL KDDPSGGDAP VLQLEYGAGR VVSTSEAEVA DAIDAATAEI AGSGKGISDR PITLVVRKRG LPDLTLVDLP GITRVPVKGQ
201: PDDIYEQVAG IIKEYIAPKE TIILNVLSAT VDFPTCESIR MSQQVDRHGD RTLAVVTKSD KAPEGLLDKV TMDDVNIGLG YVCVRNRVGD ETHDQARGEE
301: ERLFDHHPLL SRIDKSMVGI PVLAQRLMQI QATIIAKCLP DIVKQITDRL SRSTAELEQM PPDLNNVADA VRAFFHIVKR TCSSLEKMLV RGEFDEYPDD
401: RHFHGTARIA EMLNAYAKKL PAECPQQSSD LFLMEEVRIL EETTAIKLPD FLPRSAFLVL LKKKVQTVVQ VPHDLAREVW VLEVLLQHSN DFPQVQPSWR
501: RAVQSMMDKA RAQSARHVTE LIDMELVADY TYNPDYSKTW SELMEGYGKF MEAVKDRTKP TAVTLKGFGK VEVAHLRNHD DLAGQAFDMR ARLASYWRSI
601: VLRLVDGLAL HVPRAVKRLA ENDLEVALSD ELLGNKMAGV ERMLAPSPGT GSKRQRLKKS IVLLQQSKEA VADIMDRISA AGEV

Best Arabidopsis Sequence Match ( AT1G60500.1 )
(BLAST)

001: MVKKKVATKK NSPSLAIAKK KSRSNKDVVS VEAPIISSYN DRIRPLLDTV DRLRNLNVMR EGIHLPTIVV VGDQSSGKSS VLESLAGISL PRGQGICTRV
101: PLVMRLQRSS SPEPEIWLEY NDKVVPTDEE HIAEAIRAAT DVIAGSGKGV SDAPLTLHVK KAGVPDLTMV DLPGITRVPV NGQPENIYEQ ISGMIMEYIE
201: PQESIILNVL SATVDFTTCE SIRMSRKVDK TGQRTLAVVT KADMAPEGLL QKVTADDVSI VLGYVCVRNR IGEETYEEAR MQEELLFRTH PVLSLIDEDI
301: VGIPVLAQKL MLIQSSMIAR CLPKIVSKIN QKLDTAVLEL NKLPMVMAST GEALMALMDI IGSAKESLLR ILVQGDFSEY PDDQNMHCTA RLADMLSQFS
401: DSLQAKPKEV AEFLMDEIKI LDECKCVGLP NFIPRSAFLA ILSQHVDGIQ DKPVEFINKI WDYIEDVLSS VTAKRSDNFP QIQSSIKRAG RNLISKIKEQ
501: SVNRVMEIVE MEKLTDYTCN PEYMTSWTQK TSAQESFIDA VVKNENIPDY FSVTGFGNVK ISHLRKYHAH LLIPAFDMKM RITSYWKIVL RRIVDNLALY
601: LQLSVKSLVN TRFQKEIVAE MVDPRDGGGV EKMLEESPLV ASKREKLQNS IKLLKESKDA VAAIVDQNC

Arabidopsis Description

DRP4CDynamin-related protein 4C [Source:UniProtKB/Swiss-Prot;Acc:Q9ZP55]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.