Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G443600.1 | Wheat | cytosol | 69.9 | 66.16 |
| TraesCS1D01G393000.2 | Wheat | cytosol | 47.68 | 38.75 |
| Bra025448.1-P | Field mustard | cytosol | 44.44 | 37.74 |
| AT3G61760.1 | Thale cress | cytosol | 45.86 | 37.21 |
| VIT_02s0025g01570.t01 | Wine grape | cytosol, extracellular | 45.66 | 37.11 |
| GSMUA_Achr8P27540_001 | Banana | cytosol | 45.66 | 37.11 |
| Solyc05g050600.2.1 | Tomato | nucleus, plastid | 45.66 | 37.11 |
| Bra028525.1-P | Field mustard | cytosol | 45.66 | 37.05 |
| CDX67529 | Canola | cytosol | 45.66 | 37.05 |
| CDX67862 | Canola | cytosol | 45.66 | 37.05 |
| CDX99702 | Canola | cytosol | 45.66 | 37.05 |
| CDY25074 | Canola | cytosol | 45.66 | 37.05 |
| CDY27661 | Canola | cytosol | 45.66 | 37.05 |
| KRH47905 | Soybean | cytosol, endoplasmic reticulum | 45.45 | 36.95 |
| AT5G42080.1 | Thale cress | cytosol | 45.45 | 36.89 |
| Solyc01g095970.2.1 | Tomato | plastid | 45.45 | 36.89 |
| KRH77654 | Soybean | endoplasmic reticulum | 45.25 | 36.72 |
| PGSC0003DMT400000646 | Potato | cytosol | 45.05 | 36.56 |
| CDY13364 | Canola | cytosol | 45.05 | 36.56 |
| GSMUA_Achr6P26600_001 | Banana | cytosol | 44.85 | 36.45 |
| KRH27831 | Soybean | cytosol, endoplasmic reticulum, nucleus | 44.85 | 36.39 |
| KRH41321 | Soybean | endoplasmic reticulum, nucleus | 44.85 | 36.39 |
| KRH60047 | Soybean | endoplasmic reticulum | 44.65 | 36.23 |
| Bra003469.1-P | Field mustard | cytosol | 41.62 | 35.83 |
| KRH06461 | Soybean | cytosol | 34.75 | 33.14 |
| TraesCS4D01G047600.1 | Wheat | golgi, nucleus, unclear | 40.2 | 32.62 |
| TraesCS1D01G216700.2 | Wheat | cytosol | 40.61 | 32.16 |
| TraesCS2D01G279900.2 | Wheat | cytosol | 29.9 | 19.07 |
| TraesCS5D01G082000.4 | Wheat | cytosol | 25.86 | 18.69 |
| TraesCS3D01G423500.1 | Wheat | cytosol | 28.89 | 17.55 |
| TraesCS4D01G217900.1 | Wheat | cytosol | 20.81 | 15.54 |
| TraesCS4D01G098800.1 | Wheat | cytosol | 20.0 | 14.47 |
| TraesCS3D01G272800.1 | Wheat | plastid | 18.59 | 11.26 |
| TraesCS5D01G124800.1 | Wheat | cytosol | 16.77 | 10.74 |
| TraesCS7D01G200900.1 | Wheat | golgi, unclear | 18.99 | 10.41 |
| TraesCS6D01G291700.1 | Wheat | nucleus | 18.79 | 10.3 |
Protein Annotations
| Gene3D:3.30.160.20 | Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:Dynamin_GTPase | InterPro:Dynamin_SF | InterPro:Dynamin_central |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 |
| GO:GO:0016787 | InterPro:G_DYNAMIN_dom | InterPro:IPR014720 | InterPro:IPR030381 | InterPro:P-loop_NTPase | PFAM:PF00035 |
| PFAM:PF00350 | PFAM:PF01031 | PRINTS:PR00195 | PFscan:PS50137 | PFscan:PS51718 | PANTHER:PTHR11566 |
| PANTHER:PTHR11566:SF138 | SMART:SM00053 | SMART:SM00358 | SUPFAM:SSF52540 | SUPFAM:SSF54768 | EnsemblPlantsGene:TraesCS6D01G385300 |
| EnsemblPlants:TraesCS6D01G385300.1 | TIGR:cd08771 | InterPro:dsRBD_dom | : | : | : |
Description
No Description!
Coordinates
chr6D:+:463219495..463224303
Molecular Weight (calculated)
55632.5 Da
IEP (calculated)
6.839
GRAVY (calculated)
-0.257
Length
495 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDLIYFVNK LQLVRSILAD DGVGSALPID SDEVPYIAVV GGQGVGKSSL IEAIVGKDFL PKGIATRRPL VVQLFRTEEA VEYARFSHQP ERRFEDFAEV
101: AQEIADETDR ETQSPFGVSS IPIHLSIFSP SVINLTLVDL PGLVTKIADD HRSDNTVQEI QNMVGAFIGK PNCIILAVSP ANQDLSISVA VNTSQEIDPN
201: GKRTFDVLTK VDLMENRATV VNILEGRFCP SRFPWVGVVN RSQEDININL DIIAARRRER DYFGRIPEYK HLAHRMGSEH LVRSLAKYLE SYVKTRIGGY
301: LLSNNFIKSA VTKKNRLQGY SLRAYGTFPS YHLCTEGEQN EMTFQCTVDV HGQKFASAMH HRHLKDAEED AADVAYTSLM GNETMETLFE LLNKDTMCKV
401: TLLLGYVHKK KVPDPVYASS RVSVEPHRTF WLSTVTLDDN TYIGEFANTR RKSIQNAAFS AVSSMLESGN DLMIECLISK RMRTEVPRRK RCRNA
101: AQEIADETDR ETQSPFGVSS IPIHLSIFSP SVINLTLVDL PGLVTKIADD HRSDNTVQEI QNMVGAFIGK PNCIILAVSP ANQDLSISVA VNTSQEIDPN
201: GKRTFDVLTK VDLMENRATV VNILEGRFCP SRFPWVGVVN RSQEDININL DIIAARRRER DYFGRIPEYK HLAHRMGSEH LVRSLAKYLE SYVKTRIGGY
301: LLSNNFIKSA VTKKNRLQGY SLRAYGTFPS YHLCTEGEQN EMTFQCTVDV HGQKFASAMH HRHLKDAEED AADVAYTSLM GNETMETLFE LLNKDTMCKV
401: TLLLGYVHKK KVPDPVYASS RVSVEPHRTF WLSTVTLDDN TYIGEFANTR RKSIQNAAFS AVSSMLESGN DLMIECLISK RMRTEVPRRK RCRNA
001: MESLIALVNK IQRACTALGD HGEGSSLPTL WDSLPAIAVV GGQSSGKSSV LESVVGKDFL PRGAGIVTRR PLVLQLHRID EGKEYAEFMH LPKKKFTDFA
101: AVRQEISDET DRETGRSSKV ISTVPIHLSI FSPNVVNLTL VDLPGLTKVA VDGQPESIVQ DIENMVRSFI EKPNCIILAI SPANQDLATS DAIKISREVD
201: PKGDRTFGVL TKIDLMDQGT NAVDILEGRG YKLRYPWVGV VNRSQADINK SVDMIAARRR ERDYFQTSPE YRHLTERMGS EYLGKMLSKH LEVVIKSRIP
301: GLQSLITKTI SELETELSRL GKPVAADAGG KLYMIMEICR AFDQTFKEHL DGTRSGGEKI NSVFDNQFPA AIKRLQFDKH LSMDNVRKLI TEADGYQPHL
401: IAPEQGYRRL IESCLVSIRG PAEAAVDAVH SILKDLIHKS MGETSELKQY PTLRVEVSGA AVDSLDRMRD ESRKATLLLV DMESGYLTVE FFRKLPQDSE
501: KGGNPTHSIF DRYNDAYLRR IGSNVLSYVN MVCAGLRNSI PKSIVYCQVR EAKRSLLDIF FTELGQKEMS KLSKLLDEDP AVQQRRTSIA KRLELYRSAQ
601: TDIEAVAWSK
101: AVRQEISDET DRETGRSSKV ISTVPIHLSI FSPNVVNLTL VDLPGLTKVA VDGQPESIVQ DIENMVRSFI EKPNCIILAI SPANQDLATS DAIKISREVD
201: PKGDRTFGVL TKIDLMDQGT NAVDILEGRG YKLRYPWVGV VNRSQADINK SVDMIAARRR ERDYFQTSPE YRHLTERMGS EYLGKMLSKH LEVVIKSRIP
301: GLQSLITKTI SELETELSRL GKPVAADAGG KLYMIMEICR AFDQTFKEHL DGTRSGGEKI NSVFDNQFPA AIKRLQFDKH LSMDNVRKLI TEADGYQPHL
401: IAPEQGYRRL IESCLVSIRG PAEAAVDAVH SILKDLIHKS MGETSELKQY PTLRVEVSGA AVDSLDRMRD ESRKATLLLV DMESGYLTVE FFRKLPQDSE
501: KGGNPTHSIF DRYNDAYLRR IGSNVLSYVN MVCAGLRNSI PKSIVYCQVR EAKRSLLDIF FTELGQKEMS KLSKLLDEDP AVQQRRTSIA KRLELYRSAQ
601: TDIEAVAWSK
Arabidopsis Description
DRP1BDL1B [Source:UniProtKB/TrEMBL;Acc:A0A178VE87]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.