Factsheet for VIT_02s0025g01570.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

extracellular: 27664331

msms PMID: 27664331 doi

P Pérez-Bermúdez, J Blesa, JM Soriano, A Marcilla

Departament de Biologia Vegetal, Facultat de Farmàcia, Universitat de València, Burjassot, Valencia, Spain., Grupo de Ciencias de la Alimentación Basada en la Evidencia y Experimentación (CiAlBEx), Instituto de Ciencias de los Materiales, Parque Científico, Universitat de València, Paterna, Spain; Unidad Mixta de Investigación en Endocrinología, Nutrición y Dietética Clínica, Instituto de Investigación Sanitaria La Fe-Universitat de València, Valencia, Spain., Unidad Mixta de Investigación en Endocrinología, Nutrición y Dietética Clínica, Instituto de Investigación Sanitaria La Fe-Universitat de València, Valencia, Spain; Àrea de Parasitologia, Departament de Farmàcia i Tecnologia Farmacèutica i Parasitologia, Universitat de València, Burjassot, Valencia, Spain. Electronic address: antonio.marcilla@uv.es.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P27540_001	Banana	cytosol	90.31	90.31
VIT_15s0046g00470.t01	Wine grape	cytosol	89.82	89.09
GSMUA_Achr6P26600_001	Banana	cytosol	89.0	89.0
Os05t0556100-01	Rice	plasma membrane	88.83	88.83
EES19921	Sorghum	cytosol	87.52	87.52
TraesCS1A01G385400.2	Wheat	cytosol, golgi, nucleus, unclear	87.19	87.19
TraesCS1B01G411700.3	Wheat	cytosol	87.19	87.19
TraesCS1D01G393000.2	Wheat	cytosol	87.19	87.19
EES01270	Sorghum	cytosol	83.91	83.91
Os01t0681100-01	Rice	cytosol, plasma membrane	24.79	82.07
Zm00001d009504_P002	Maize	cytosol	87.36	81.1
Zm00001d038955_P001	Maize	cytosol, mitochondrion, plasma membrane	87.36	79.4
HORVU1Hr1G084970.2	Barley	plasma membrane	87.52	78.85
VIT_02s0012g00740.t01	Wine grape	cytosol	73.4	72.92
VIT_15s0021g00480.t01	Wine grape	cytosol	71.1	69.95
VIT_01s0011g05800.t01	Wine grape	cytosol	69.46	69.0
TraesCS6B01G443600.1	Wheat	cytosol	42.53	49.52
TraesCS6D01G385300.1	Wheat	cytosol	37.11	45.66
VIT_04s0008g07010.t01	Wine grape	cytosol	27.59	25.93
VIT_03s0038g00970.t01	Wine grape	cytosol	35.47	25.87
VIT_15s0107g00170.t01	Wine grape	cytosol	9.36	24.26
VIT_00s0267g00020.t01	Wine grape	cytosol	6.08	23.57
VIT_19s0015g02240.t01	Wine grape	golgi, mitochondrion, plasma membrane	9.2	21.13
VIT_18s0089g00350.t01	Wine grape	cytosol	27.75	18.15
VIT_12s0035g01740.t01	Wine grape	cytosol	26.77	17.72
VIT_19s0014g02500.t01	Wine grape	plastid	21.51	15.63
VIT_12s0055g00490.t01	Wine grape	cytosol	19.05	15.01
VIT_03s0110g00120.t01	Wine grape	cytosol	4.43	10.93
VIT_02s0087g00010.t01	Wine grape	cytosol	2.96	9.68
VIT_03s0038g00540.t01	Wine grape	cytosol	2.46	8.52

Protein Annotations

Gene3D:1.20.120.1240	EntrezGene:100256446	wikigene:100256446	MapMan:22.1.7.1	Gene3D:3.40.50.300	EMBL:AM454786
ProteinID:CAN74415	ProteinID:CAN74415.1	ProteinID:CBI34494	ProteinID:CBI34494.3	UniProt:D7TVG9	InterPro:Dynamin_GTPase
InterPro:Dynamin_GTPase_CS	InterPro:Dynamin_SF	InterPro:Dynamin_central	EMBL:FN596251	InterPro:GED	InterPro:GED_dom
GO:GO:0000166	GO:GO:0000266	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005515	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	InterPro:G_DYNAMIN_dom
InterPro:IPR020850	InterPro:IPR030381	EntrezGene:LOC100256446	wikigene:LOC100256446	InterPro:P-loop_NTPase	PFAM:PF00350
PFAM:PF01031	PFAM:PF02212	PRINTS:PR00195	ScanProsite:PS00410	PFscan:PS51388	PFscan:PS51718
PANTHER:PTHR11566	PANTHER:PTHR11566:SF58	SMART:SM00053	SMART:SM00302	SUPFAM:SSF52540	TIGR:TC52163
TIGR:TC70304	UniParc:UPI00015CD52F	ArrayExpress:VIT_02s0025g01570	EnsemblPlantsGene:VIT_02s0025g01570	EnsemblPlants:VIT_02s0025g01570.t01	unigene:Vvi.6706
RefSeq:XP_002268528	RefSeq:XP_002268528.1	RefSeq:XP_002268573	RefSeq:XP_002268573.1	RefSeq:XP_003631401	RefSeq:XP_003631401.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2:-:1509254..1518573

Molecular Weight (calculated)

68266.4 Da

IEP (calculated)

8.133

GRAVY (calculated)

-0.271

Length

609 amino acids

Sequence
(BLAST)

001: MENLISLVNK IQRACTALGD HGDESALPTL WDSLPAIAVV GGQSSGKSSV LESIVGKDFL PRGSGIVTRR PLVLQLHKID EGREYAEFLH LPRRRFTDFA
101: AVRKEISDET DRETGRTKQI SSVPIHLSIY SPNVVNLTLI DLPGLTKVAV EGQPDSIVQD IENMVRSFIE KPNCIILAIS PANQDLATSD AIKISREVDP
201: KGERTFGVLT KIDLMDKGTD AVDILEGKSY RLQFPWIGVV NRSQADINKS VDMIAARRRE REYFANTPEY KHLAHRMGSE HLGKMLSKHL ENVIKSRIPS
301: IQSLINKTIV ELEAELSRLG KPIAADAGGK LYMIMEISRV FDQIYKEHLD GVRAGGDKIY HVFDNQLPAA LKRLQFDKQL SMENVRKLIT EADGYQPHLI
401: APEQGYRRLI ESSIVSIRGP AEAAVDAVHA ILKEMVNKAI SETAEFKQYP ALRIEVANAA CDSLDRMRDE SKKATLKLVD MECSYLTVDF FRKLPQDIEK
501: GGNPTHSIFD RYNDSYLRRI GTTVLSYVNM VCATLRNSIP KSIVYCQVRE AKRSLLDHFF TELGKLEPKQ LASLLNEDPA VMARRTALAK RLELYRSAQA
601: EIDAVAWSK

Best Arabidopsis Sequence Match ( AT5G42080.1 )
(BLAST)

001: MENLISLVNK IQRACTALGD HGDSSALPTL WDSLPAIAVV GGQSSGKSSV LESIVGKDFL PRGSGIVTRR PLVLQLQKID DGTREYAEFL HLPRKKFTDF
101: AAVRKEIQDE TDRETGRSKA ISSVPIHLSI YSPNVVNLTL IDLPGLTKVA VDGQSDSIVK DIENMVRSYI EKPNCIILAI SPANQDLATS DAIKISREVD
201: PSGDRTFGVL TKIDLMDKGT DAVEILEGRS FKLKYPWVGV VNRSQADINK NVDMIAARKR EREYFSNTTE YRHLANKMGS EHLAKMLSKH LERVIKSRIP
301: GIQSLINKTV LELETELSRL GKPIAADAGG KLYSIMEICR LFDQIFKEHL DGVRAGGEKV YNVFDNQLPA ALKRLQFDKQ LAMDNIRKLV TEADGYQPHL
401: IAPEQGYRRL IESSIVSIRG PAEASVDTVH AILKDLVHKS VNETVELKQY PALRVEVTNA AIESLDKMRE GSKKATLQLV DMECSYLTVD FFRKLPQDVE
501: KGGNPTHSIF DRYNDSYLRR IGSNVLSYVN MVCAGLRNSI PKSIVYCQVR EAKRSLLDHF FAELGTMDMK RLSSLLNEDP AIMERRSAIS KRLELYRAAQ
601: SEIDAVAWSK

Arabidopsis Description

DRP1ARSW9 [Source:UniProtKB/TrEMBL;Acc:A0A178UEJ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.