Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G385300.1 | Wheat | cytosol | 66.16 | 69.9 |
| TraesCS1B01G411700.3 | Wheat | cytosol | 50.1 | 43.02 |
| VIT_02s0025g01570.t01 | Wine grape | cytosol, extracellular | 49.52 | 42.53 |
| Solyc05g050600.2.1 | Tomato | nucleus, plastid | 48.95 | 42.04 |
| GSMUA_Achr8P27540_001 | Banana | cytosol | 48.57 | 41.71 |
| Bra025448.1-P | Field mustard | cytosol | 46.46 | 41.68 |
| GSMUA_Achr6P26600_001 | Banana | cytosol | 48.18 | 41.38 |
| AT5G42080.1 | Thale cress | cytosol | 48.18 | 41.31 |
| Solyc01g095970.2.1 | Tomato | plastid | 48.18 | 41.31 |
| PGSC0003DMT400000646 | Potato | cytosol | 48.18 | 41.31 |
| KRH77654 | Soybean | endoplasmic reticulum | 48.18 | 41.31 |
| CDY27661 | Canola | cytosol | 48.18 | 41.31 |
| CDX67529 | Canola | cytosol | 48.18 | 41.31 |
| KRH60047 | Soybean | endoplasmic reticulum | 47.99 | 41.15 |
| CDY13364 | Canola | cytosol | 47.99 | 41.15 |
| Bra028525.1-P | Field mustard | cytosol | 47.99 | 41.15 |
| KRH47905 | Soybean | cytosol, endoplasmic reticulum | 47.8 | 41.05 |
| KRH41321 | Soybean | endoplasmic reticulum, nucleus | 47.8 | 40.98 |
| CDX99702 | Canola | cytosol | 47.8 | 40.98 |
| KRH27831 | Soybean | cytosol, endoplasmic reticulum, nucleus | 47.61 | 40.82 |
| CDY25074 | Canola | cytosol | 46.27 | 39.67 |
| CDX67862 | Canola | cytosol | 46.27 | 39.67 |
| AT3G61760.1 | Thale cress | cytosol | 45.89 | 39.34 |
| Bra003469.1-P | Field mustard | cytosol | 43.02 | 39.13 |
| TraesCS4B01G047700.1 | Wheat | cytosol | 42.45 | 36.39 |
| KRH06461 | Soybean | cytosol | 35.76 | 36.03 |
| TraesCS1B01G227700.1 | Wheat | cytosol | 42.06 | 35.2 |
| TraesCS2B01G298400.1 | Wheat | cytosol | 29.06 | 19.49 |
| TraesCS3B01G465100.3 | Wheat | cytosol, plastid | 28.87 | 18.78 |
| TraesCS4B01G217700.1 | Wheat | cytosol | 19.89 | 16.3 |
| TraesCS5B01G120600.1 | Wheat | cytosol | 17.59 | 11.9 |
| TraesCS7B01G104500.1 | Wheat | golgi, unclear | 18.16 | 10.52 |
| TraesCS6B01G342500.2 | Wheat | cytosol | 17.97 | 10.18 |
| TraesCS3B01G307100.1 | Wheat | plastid | 15.87 | 10.16 |
Protein Annotations
| MapMan:22.1.7.1 | Gene3D:3.30.160.20 | Gene3D:3.40.50.300 | InterPro:Dynamin_GTPase | InterPro:Dynamin_SF | InterPro:Dynamin_central |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 |
| GO:GO:0016787 | InterPro:G_DYNAMIN_dom | InterPro:IPR014720 | InterPro:IPR030381 | InterPro:P-loop_NTPase | PFAM:PF00035 |
| PFAM:PF00350 | PFAM:PF01031 | PRINTS:PR00195 | PFscan:PS50137 | PFscan:PS51718 | PANTHER:PTHR11566 |
| PANTHER:PTHR11566:SF58 | SMART:SM00053 | SMART:SM00358 | SUPFAM:SSF52540 | SUPFAM:SSF54768 | EnsemblPlantsGene:TraesCS6B01G443600 |
| EnsemblPlants:TraesCS6B01G443600.1 | TIGR:cd00048 | TIGR:cd08771 | InterPro:dsRBD_dom | SEG:seg | : |
Description
No Description!
Coordinates
chr6B:+:706582836..706589418
Molecular Weight (calculated)
58520.7 Da
IEP (calculated)
8.361
GRAVY (calculated)
-0.209
Length
523 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDLTSLVNK LQLACTTLAD NDVGSALPTD WDELPFIAVM GGQGSGKSSL LEAIVGKDFL PRGSAIATRR PLIVHLFKTE EGTKYAKFLH QPDKTYEDFA
101: EVSMEIVDET DRETGSPYGI SSVPIRLSIF SPNVVNLTLI DLPGLTKIAV DDGSVSIVQE IENMVRAFIE KPNCIILAIS SADQDLSNSE IVNISREVDP
201: KGERTLGVLT KIDLMENRAS VVNILEGRSC RFHFPWVGVV NRSQKDININ MDIISARCRE REYFGNTPEY KHLAHRMGSE HLIRSLGKHL ESYIKTRVGG
301: YLFTKSSIKS TVIKKSMLQS YTLRAYGTFP TYHVRTEGEP HDMYFECTVH VQSHKFVSAT RHRRRKDAEE DASDVAYTAL MGNETLETLL GLLNKDTICK
401: VGLLLQYACK KKVADPVYAS SKVAAGIQRT LWLSTVVLED KTYIGEVATT KRLSIQKAAS AATSSMLEAG DDVMIKLLLA KRLKTEVPRR KRDRGAQEED
501: RLYSLRSFLL RILNLCQVKL YKV
101: EVSMEIVDET DRETGSPYGI SSVPIRLSIF SPNVVNLTLI DLPGLTKIAV DDGSVSIVQE IENMVRAFIE KPNCIILAIS SADQDLSNSE IVNISREVDP
201: KGERTLGVLT KIDLMENRAS VVNILEGRSC RFHFPWVGVV NRSQKDININ MDIISARCRE REYFGNTPEY KHLAHRMGSE HLIRSLGKHL ESYIKTRVGG
301: YLFTKSSIKS TVIKKSMLQS YTLRAYGTFP TYHVRTEGEP HDMYFECTVH VQSHKFVSAT RHRRRKDAEE DASDVAYTAL MGNETLETLL GLLNKDTICK
401: VGLLLQYACK KKVADPVYAS SKVAAGIQRT LWLSTVVLED KTYIGEVATT KRLSIQKAAS AATSSMLEAG DDVMIKLLLA KRLKTEVPRR KRDRGAQEED
501: RLYSLRSFLL RILNLCQVKL YKV
001: MESLIALVNK IQRACTALGD HGEGSSLPTL WDSLPAIAVV GGQSSGKSSV LESVVGKDFL PRGAGIVTRR PLVLQLHRID EGKEYAEFMH LPKKKFTDFA
101: AVRQEISDET DRETGRSSKV ISTVPIHLSI FSPNVVNLTL VDLPGLTKVA VDGQPESIVQ DIENMVRSFI EKPNCIILAI SPANQDLATS DAIKISREVD
201: PKGDRTFGVL TKIDLMDQGT NAVDILEGRG YKLRYPWVGV VNRSQADINK SVDMIAARRR ERDYFQTSPE YRHLTERMGS EYLGKMLSKH LEVVIKSRIP
301: GLQSLITKTI SELETELSRL GKPVAADAGG KLYMIMEICR AFDQTFKEHL DGTRSGGEKI NSVFDNQFPA AIKRLQFDKH LSMDNVRKLI TEADGYQPHL
401: IAPEQGYRRL IESCLVSIRG PAEAAVDAVH SILKDLIHKS MGETSVRISL LKVINPTTTI TLMSFEA
101: AVRQEISDET DRETGRSSKV ISTVPIHLSI FSPNVVNLTL VDLPGLTKVA VDGQPESIVQ DIENMVRSFI EKPNCIILAI SPANQDLATS DAIKISREVD
201: PKGDRTFGVL TKIDLMDQGT NAVDILEGRG YKLRYPWVGV VNRSQADINK SVDMIAARRR ERDYFQTSPE YRHLTERMGS EYLGKMLSKH LEVVIKSRIP
301: GLQSLITKTI SELETELSRL GKPVAADAGG KLYMIMEICR AFDQTFKEHL DGTRSGGEKI NSVFDNQFPA AIKRLQFDKH LSMDNVRKLI TEADGYQPHL
401: IAPEQGYRRL IESCLVSIRG PAEAAVDAVH SILKDLIHKS MGETSVRISL LKVINPTTTI TLMSFEA
Arabidopsis Description
DRP1BDL1B [Source:UniProtKB/TrEMBL;Acc:A0A178VE87]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.