Factsheet for TraesCS1B01G227700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G216700.2	Wheat	cytosol	99.2	99.2
TraesCS1A01G213900.2	Wheat	cytosol	99.2	99.2
Os10t0567800-01	Rice	plasma membrane	88.64	89.64
HORVU1Hr1G054560.1	Barley	mitochondrion	96.96	88.08
KXG38886	Sorghum	cytosol	87.04	86.35
Zm00001d030005_P002	Maize	cytosol, mitochondrion	55.52	86.32
GSMUA_Achr2P18210_001	Banana	cytosol	81.76	83.63
GSMUA_Achr11P...	Banana	cytosol	81.92	83.39
VIT_15s0021g00480.t01	Wine grape	cytosol	80.8	81.58
KRH46533	Soybean	cytosol, endoplasmic reticulum, nucleus	80.32	81.49
PGSC0003DMT400004319	Potato	cytosol	78.88	80.29
Solyc01g088510.2.1	Tomato	nucleus	65.6	80.08
KRH66384	Soybean	cytosol, endoplasmic reticulum	78.56	79.45
KRH48908	Soybean	cytosol, nucleus	78.4	79.29
PGSC0003DMT400028286	Potato	cytosol	76.8	78.43
TraesCS4B01G047700.1	Wheat	cytosol	76.0	77.87
AT3G60190.1	Thale cress	cytosol	77.6	77.72
CDX71832	Canola	cytosol	77.44	77.44
CDY41188	Canola	cytosol	77.12	77.12
Bra007513.1-P	Field mustard	cytosol	76.8	76.8
Solyc10g062160.1.1	Tomato	plastid	71.84	76.75
CDX89053	Canola	cytosol	76.64	76.52
Bra014507.1-P	Field mustard	cytosol	76.64	76.52
CDY42672	Canola	cytosol	76.32	76.32
CDY30477	Canola	cytosol	73.12	73.95
CDY23444	Canola	cytosol	72.96	73.79
Bra037643.1-P	Field mustard	cytosol	72.8	73.62
AT2G44590.3	Thale cress	cytosol	72.0	73.53
PGSC0003DMT400004228	Potato	cytosol	32.8	72.44
TraesCS1B01G411700.3	Wheat	cytosol	65.12	66.83
TraesCS6B01G443600.1	Wheat	cytosol	35.2	42.06
TraesCS2B01G298400.1	Wheat	cytosol	34.24	27.44
TraesCS3B01G465100.3	Wheat	cytosol, plastid	35.04	27.24
TraesCS4B01G217700.1	Wheat	cytosol	23.68	23.2
TraesCS7B01G104500.1	Wheat	golgi, unclear	29.76	20.6
TraesCS6B01G342500.2	Wheat	cytosol	28.32	19.18
TraesCS5B01G120600.1	Wheat	cytosol	19.04	15.39
TraesCS3B01G307100.1	Wheat	plastid	19.04	14.57

Protein Annotations

Gene3D:1.20.120.1240	MapMan:22.1.7.1	Gene3D:3.40.50.300	InterPro:Dynamin_GTPase	InterPro:Dynamin_GTPase_CS	InterPro:Dynamin_SF
InterPro:Dynamin_central	InterPro:GED	InterPro:GED_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:G_DYNAMIN_dom	InterPro:IPR020850
InterPro:IPR030381	InterPro:P-loop_NTPase	PFAM:PF00350	PFAM:PF01031	PFAM:PF02212	PRINTS:PR00195
ScanProsite:PS00410	PFscan:PS51388	PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF73	SMART:SM00053
SMART:SM00302	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS1B01G227700	EnsemblPlants:TraesCS1B01G227700.1	TIGR:cd08771	SEG:seg

Description

No Description!

Coordinates

chr1B:+:409272514..409276918

Molecular Weight (calculated)

69667.5 Da

IEP (calculated)

6.758

GRAVY (calculated)

-0.260

Length

625 amino acids

Sequence
(BLAST)

001: MATMENVIVL VNRIQRACTV LGDHGGDGAA ASLPALWEAL PSVAVVGGQS SGKSSVLESI VGRDFLPRGS GIVTRRPLVL QLHKTEVGEQ EYAEFLHAPR
101: RRFTDFALVR MEIEDETDRL TGRSKQISPV PIHLSIYSPN VVNLTLIDLP GLTKVATEGQ PESIAQDIEN MVRLYVEKPN CIILAISPAN QDIATSDAIK
201: LARDVDPTGE RTFGVLTKLD LMDKGTDALD VLEGRAYKLQ HPWVGIVNRS QADINRNVDM IIAREKEQEF FHSSPEYAHL ASRMGSEYLA KLLSQQLEAV
301: IRARIPSITS LINKTIDELE SEMDHLGRPI GSDAGAQLYL VLELCRAFDK IFKEHLDGGR PGGDRIYWVF DNQLPAALRK LPFDRHLSLP NVKRIVSQAD
401: GYQPHLIAPE QGYRRLIESA LSFFRGPAEA SVDAVHNVLK ELVRKSIGET EELRRFPTLQ AELAAACNKA LESFRQEGRK TTVRLVDMES AYLTVDFFRK
501: LPQEVDRAGT GYPVDNAGTG PSTPVDRYSD AHFRRIASNV SSYIGMISDT LKNTIPKAVV HCQVREAKRS LLNYFYIQVG SKDAKQLALL LDEDPALMGR
601: RQQCFKRLEL YKSARDEIDA VSWSR

Best Arabidopsis Sequence Match ( AT3G60190.1 )
(BLAST)

001: MTTMESLIGL VNRIQRACTV LGDYGGGTGS NAFNSLWEAL PTVAVVGGQS SGKSSVLESI VGRDFLPRGS GIVTRRPLVL QLHKTDDGTE EYAEFLHLPK
101: KQFTDFALVR REIQDETDRI TGKNKQISPV PIHLSIYSPN VVNLTLIDLP GLTKVAVEGQ PETIAEDIES MVRTYVDKPN CIILAISPAN QDIATSDAIK
201: LAKDVDPTGE RTFGVLTKLD LMDKGTNALE VLEGRSYRLQ HPWVGIVNRS QADINKNVDM MLARRKEREY FDTSPDYGHL ASKMGSEYLA KLLSKHLESV
301: IRTRIPSILS LINKSIEELE RELDRMGRPV AVDAGAQLYT ILEMCRAFDK IFKEHLDGGR PGGDRIYGVF DNQLPAALKK LPFDRHLSLQ SVKKIVSEAD
401: GYQPHLIAPE QGYRRLIEGA LGYFRGPAEA SVDAVHYVLK ELVRKSISET EELKRFPSLQ VELAAAANSS LEKFREESKK SVIRLVDMES AYLTAEFFRK
501: LPQEIERPVT NSKNQTASPS SATLDQYGDG HFRRIASNVS AYVNMVSDTL RNTIPKACVY CQVRQAKLAL LNYFYSQISK REGKQLGQLL DEDPALMDRR
601: LECAKRLELY KKARDEIDAV AWVR

Arabidopsis Description

DRP1EDynamin-related protein 1E [Source:UniProtKB/Swiss-Prot;Acc:Q9FNX5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.