Factsheet for GSMUA_Achr2P18210_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	94.27	93.81
VIT_15s0021g00480.t01	Wine grape	cytosol	89.03	87.88
Os10t0567800-01	Rice	plasma membrane	87.23	86.25
KRH46533	Soybean	cytosol, endoplasmic reticulum, nucleus	86.91	86.2
GSMUA_AchrUn_...	Banana	cytosol	87.56	85.06
PGSC0003DMT400004319	Potato	cytosol	85.11	84.69
KRH48908	Soybean	cytosol, nucleus	85.6	84.63
Solyc01g088510.2.1	Tomato	nucleus	70.87	84.57
KXG38886	Sorghum	cytosol	86.58	83.97
KRH66384	Soybean	cytosol, endoplasmic reticulum	84.62	83.66
Zm00001d030005_P002	Maize	cytosol, mitochondrion	54.99	83.58
PGSC0003DMT400028286	Potato	cytosol	83.63	83.5
Solyc10g062160.1.1	Tomato	plastid	79.05	82.56
GSMUA_Achr7P11190_001	Banana	cytosol	82.65	82.52
GSMUA_Achr2P21630_001	Banana	cytosol	82.16	82.43
CDX71832	Canola	cytosol	84.12	82.24
CDY41188	Canola	cytosol	83.96	82.08
TraesCS1D01G216700.2	Wheat	cytosol	83.96	82.08
AT3G60190.1	Thale cress	cytosol	83.8	82.05
Bra007513.1-P	Field mustard	cytosol	83.8	81.92
Bra014507.1-P	Field mustard	cytosol	83.8	81.79
CDX89053	Canola	cytosol	83.8	81.79
TraesCS1B01G227700.1	Wheat	cytosol	83.63	81.76
TraesCS1A01G213900.2	Wheat	cytosol	83.63	81.76
CDY42672	Canola	cytosol	83.47	81.6
AT2G44590.3	Thale cress	cytosol	77.91	77.78
CDY30477	Canola	cytosol	77.74	76.86
Bra037643.1-P	Field mustard	cytosol	77.58	76.7
CDY23444	Canola	cytosol	77.58	76.7
PGSC0003DMT400004228	Potato	cytosol	35.35	76.33
HORVU1Hr1G054560.1	Barley	mitochondrion	83.96	74.56
GSMUA_Achr6P26600_001	Banana	cytosol	73.98	74.22
GSMUA_Achr8P27540_001	Banana	cytosol	72.5	72.74
GSMUA_Achr1P04880_001	Banana	cytosol	72.18	72.3
GSMUA_Achr10P...	Banana	cytosol	35.19	27.46
GSMUA_Achr8P08760_001	Banana	cytosol	29.3	23.25
GSMUA_Achr8P19650_001	Banana	cytosol, mitochondrion	20.95	22.98
GSMUA_Achr1P18350_001	Banana	cytosol	29.46	20.13
GSMUA_Achr3P01090_001	Banana	nucleus	29.79	19.83
GSMUA_Achr4P20040_001	Banana	cytosol	29.3	19.48
GSMUA_Achr7P05530_001	Banana	nucleus	28.81	19.11
GSMUA_Achr2P09480_001	Banana	plastid	20.62	15.4
GSMUA_Achr10P...	Banana	cytosol	16.69	15.02

Protein Annotations

Gene3D:1.20.120.1240	MapMan:22.1.7.1	Gene3D:3.40.50.300	InterPro:Dynamin_GTPase	InterPro:Dynamin_GTPase_CS	InterPro:Dynamin_SF
InterPro:Dynamin_central	InterPro:GED	InterPro:GED_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr2G18210_001	EnsemblPlants:GSMUA_Achr2P18210_001
EnsemblPlants:GSMUA_Achr2T18210_001	InterPro:G_DYNAMIN_dom	InterPro:IPR020850	InterPro:IPR030381	UniProt:M0S912	InterPro:P-loop_NTPase
PFAM:PF00350	PFAM:PF01031	PFAM:PF02212	PRINTS:PR00195	ScanProsite:PS00410	PFscan:PS51388
PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF77	SMART:SM00053	SMART:SM00302	SUPFAM:SSF52540
UniParc:UPI0002958FFF	SEG:seg	:	:	:	:

Description

Dynamin-related protein 1E [Source:GMGC_GENE;Acc:GSMUA_Achr2G18210_001]

Coordinates

chr2:-:18654700..18662449

Molecular Weight (calculated)

68492.4 Da

IEP (calculated)

8.198

GRAVY (calculated)

-0.314

Length

611 amino acids

Sequence
(BLAST)

001: MESLIGLVNR IQRACTVLGD HGGADGALPT LWEALPSVAV VGGQSSGKSS VLESIVGRDF LPRGSGIVTR RPLVLQLHKT EEGQPEYAEF LHLPKRKFTD
101: FALVRKEIQD ETDRLTGKTK QISPVPIHLS IYSPFVVNLT LIDLPGLTKV AVEGQPDSIV QDIENMVRTY VEKPNCIILA ISPANQDIAT SDAIKLAREV
201: DPTGERTFGV LTKLDLMDKG TNALDVLEGR SYKLQHPWVG IVNRSQADIN KNVDMIVARR KEREYFANSL DYSHLASKMG SEYLAKLLSR HLESVIRARI
301: PSISSLITKT IDELESEMDH LGRPIALDAG AQLYTILELC RAFDKIFKEH LEGGRPGGDR IYGVFDNQLP AALKKLPFDR HLSLQNVKKV VSEADGYQPH
401: LIAPEQGYRR LIESSLNYFR GPAEASVDAV HFVLKELVRK SIGETQELKR FPTLQAELAA ASYQSLEKFR EDSRKTVIRL VDMEASYLTV DFFRKLPQEV
501: EKAGNPATPT IDRYTDGHFR RIASNVSSYI SMVSETLKNS IPKAAVYCQV REAKRSLLNH FYTQVGKKEG KQLSQLLDED PALMERRLQC AKRLELYKNA
601: RDEIDAVSWA R

Best Arabidopsis Sequence Match ( AT3G60190.1 )
(BLAST)

001: MTTMESLIGL VNRIQRACTV LGDYGGGTGS NAFNSLWEAL PTVAVVGGQS SGKSSVLESI VGRDFLPRGS GIVTRRPLVL QLHKTDDGTE EYAEFLHLPK
101: KQFTDFALVR REIQDETDRI TGKNKQISPV PIHLSIYSPN VVNLTLIDLP GLTKVAVEGQ PETIAEDIES MVRTYVDKPN CIILAISPAN QDIATSDAIK
201: LAKDVDPTGE RTFGVLTKLD LMDKGTNALE VLEGRSYRLQ HPWVGIVNRS QADINKNVDM MLARRKEREY FDTSPDYGHL ASKMGSEYLA KLLSKHLESV
301: IRTRIPSILS LINKSIEELE RELDRMGRPV AVDAGAQLYT ILEMCRAFDK IFKEHLDGGR PGGDRIYGVF DNQLPAALKK LPFDRHLSLQ SVKKIVSEAD
401: GYQPHLIAPE QGYRRLIEGA LGYFRGPAEA SVDAVHYVLK ELVRKSISET EELKRFPSLQ VELAAAANSS LEKFREESKK SVIRLVDMES AYLTAEFFRK
501: LPQEIERPVT NSKNQTASPS SATLDQYGDG HFRRIASNVS AYVNMVSDTL RNTIPKACVY CQVRQAKLAL LNYFYSQISK REGKQLGQLL DEDPALMDRR
601: LECAKRLELY KKARDEIDAV AWVR

Arabidopsis Description

DRP1EDynamin-related protein 1E [Source:UniProtKB/Swiss-Prot;Acc:Q9FNX5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.