Factsheet for GSMUA_AchrUn_randomP04030_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P18210_001	Banana	cytosol	85.06	87.56
GSMUA_Achr11P...	Banana	cytosol	85.06	87.13
VIT_15s0021g00480.t01	Wine grape	cytosol	83.62	84.98
KRH46533	Soybean	cytosol, endoplasmic reticulum, nucleus	82.51	84.25
KRH48908	Soybean	cytosol, nucleus	81.88	83.33
PGSC0003DMT400004319	Potato	cytosol	81.08	83.06
KRH66384	Soybean	cytosol, endoplasmic reticulum	81.56	83.01
Solyc01g088510.2.1	Tomato	nucleus	67.57	83.01
PGSC0003DMT400028286	Potato	cytosol	79.81	82.03
GSMUA_Achr2P21630_001	Banana	cytosol	78.86	81.44
Solyc10g062160.1.1	Tomato	plastid	75.52	81.2
GSMUA_Achr7P11190_001	Banana	cytosol	78.7	80.88
AT3G60190.1	Thale cress	cytosol	79.33	79.97
CDX89053	Canola	cytosol	79.49	79.87
Bra014507.1-P	Field mustard	cytosol	79.49	79.87
CDY42672	Canola	cytosol	79.33	79.84
CDY41188	Canola	cytosol	79.01	79.52
Bra007513.1-P	Field mustard	cytosol	78.7	79.2
CDX71832	Canola	cytosol	78.7	79.2
EER98546	Sorghum	cytosol	77.74	78.37
Os09t0572900-01	Rice	cytosol, plasma membrane	77.58	77.96
PGSC0003DMT400004228	Potato	cytosol	34.82	77.39
AT2G44590.3	Thale cress	cytosol	75.04	77.12
Zm00001d005306_P002	Maize	cytosol, extracellular, mitochondrion	76.79	76.91
CDY30477	Canola	cytosol	74.88	76.21
CDY23444	Canola	cytosol	74.88	76.21
Bra037643.1-P	Field mustard	cytosol	74.72	76.05
GSMUA_Achr6P26600_001	Banana	cytosol	71.54	73.89
GSMUA_Achr8P27540_001	Banana	cytosol	69.95	72.25
GSMUA_Achr1P04880_001	Banana	cytosol	69.16	71.31
GSMUA_Achr10P...	Banana	cytosol	33.86	27.2
GSMUA_Achr8P19650_001	Banana	cytosol, mitochondrion	20.83	23.52
GSMUA_Achr8P08760_001	Banana	cytosol	28.78	23.51
GSMUA_Achr3P01090_001	Banana	nucleus	29.73	20.37
GSMUA_Achr1P18350_001	Banana	cytosol	28.93	20.36
GSMUA_Achr4P20040_001	Banana	cytosol	28.93	19.8
GSMUA_Achr7P05530_001	Banana	nucleus	28.62	19.54
GSMUA_Achr10P...	Banana	cytosol	16.85	15.61
GSMUA_Achr2P09480_001	Banana	plastid	19.4	14.91

Protein Annotations

Gene3D:1.20.120.1240	MapMan:22.1.7.1	Gene3D:3.40.50.300	InterPro:Dynamin_GTPase	InterPro:Dynamin_GTPase_CS	InterPro:Dynamin_SF
InterPro:Dynamin_central	InterPro:GED	InterPro:GED_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSMUA_AchrUn_randomG04030_001	EnsemblPlants:GSMUA_AchrUn_randomP04030_001
EnsemblPlants:GSMUA_AchrUn_randomT04030_001	InterPro:G_DYNAMIN_dom	InterPro:IPR020850	InterPro:IPR030381	UniProt:M0U665	InterPro:P-loop_NTPase
PFAM:PF00350	PFAM:PF01031	PFAM:PF02212	PRINTS:PR00195	ScanProsite:PS00410	PFscan:PS51388
PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF73	SMART:SM00053	SMART:SM00302	SUPFAM:SSF52540
UniParc:UPI000295A889	SEG:seg	:	:	:	:

Description

Dynamin-related protein 1E [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG04030_001]

Coordinates

chrchrUn_random:-:17801672..17807710

Molecular Weight (calculated)

70327.3 Da

IEP (calculated)

7.942

GRAVY (calculated)

-0.374

Length

629 amino acids

Sequence
(BLAST)

001: MESLIGLVNR IQRACTALGD HGDAEESGVG LPTLWEALPS VVVVGGQSSG KSSVLESIVG RDFLPRGSGI VTRRPLVLQL HKVDEGKVEY AEFLHLPRRR
101: FTDFSLVRKE IEDETERLTG KTKQISTHPI HLSIYSPNVV NLTLIDLPGL TKVAVEGQPD SIVQDIETMV RSYVAKPNCI ILAISPANQD IATSDAMKLA
201: KEVDPTGERT FGVLTKLDLM DKGTNALDVL EGRSYRLQYP WVGVVNRSQA DINKNVDMIV ARRKEREYFA TSPDYSHVAS RMGSEYLAKL LSKHLESVIR
301: SRIPSITSLI NKTIDELEAE MNHLGRPIAV DAGAQLYTIL EMCRAFDRVF KEHLDGGRPG GDRIYGVFDN QLPAALKKLP FDRYLSLQNV KKVVSEADGY
401: QPHLIAPEQG YRRLIEGGLG YFRGPAEASV DAVHYVLKEL VRQSIGETQE LRRFPTLQTE LAAAAYEALE RFREDSRKTA LRLVDMEASY LTVEFFRKLP
501: QEVERGNNPA GSNPTGKKPD DSNPAGPTID RYGEGHFRRI GSNVSAYISM VSDTLRNTIP KAVVYCQVRE AKRSLLNHFY TQVGKKEGKQ LASILDENPA
601: LMERRMQCAK RLELYKSARD EIDSVSWNR

Best Arabidopsis Sequence Match ( AT3G60190.1 )
(BLAST)

001: MTTMESLIGL VNRIQRACTV LGDYGGGTGS NAFNSLWEAL PTVAVVGGQS SGKSSVLESI VGRDFLPRGS GIVTRRPLVL QLHKTDDGTE EYAEFLHLPK
101: KQFTDFALVR REIQDETDRI TGKNKQISPV PIHLSIYSPN VVNLTLIDLP GLTKVAVEGQ PETIAEDIES MVRTYVDKPN CIILAISPAN QDIATSDAIK
201: LAKDVDPTGE RTFGVLTKLD LMDKGTNALE VLEGRSYRLQ HPWVGIVNRS QADINKNVDM MLARRKEREY FDTSPDYGHL ASKMGSEYLA KLLSKHLESV
301: IRTRIPSILS LINKSIEELE RELDRMGRPV AVDAGAQLYT ILEMCRAFDK IFKEHLDGGR PGGDRIYGVF DNQLPAALKK LPFDRHLSLQ SVKKIVSEAD
401: GYQPHLIAPE QGYRRLIEGA LGYFRGPAEA SVDAVHYVLK ELVRKSISET EELKRFPSLQ VELAAAANSS LEKFREESKK SVIRLVDMES AYLTAEFFRK
501: LPQEIERPVT NSKNQTASPS SATLDQYGDG HFRRIASNVS AYVNMVSDTL RNTIPKACVY CQVRQAKLAL LNYFYSQISK REGKQLGQLL DEDPALMDRR
601: LECAKRLELY KKARDEIDAV AWVR

Arabidopsis Description

DRP1EDynamin-related protein 1E [Source:UniProtKB/Swiss-Prot;Acc:Q9FNX5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.