Factsheet for Os09t0572900-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

plastid 1
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER98546	Sorghum	cytosol	88.18	88.46
Zm00001d005306_P002	Maize	cytosol, extracellular, mitochondrion	86.58	86.31
Os10t0567800-01	Rice	plasma membrane	77.48	78.48
KRH66384	Soybean	cytosol, endoplasmic reticulum	77.16	78.16
KRH48908	Soybean	cytosol, nucleus	77.16	78.16
VIT_15s0021g00480.t01	Wine grape	cytosol	77.16	78.03
Solyc01g088510.2.1	Tomato	nucleus	63.58	77.73
GSMUA_AchrUn_...	Banana	cytosol	77.96	77.58
PGSC0003DMT400004319	Potato	cytosol	76.04	77.52
KRH46533	Soybean	cytosol, endoplasmic reticulum, nucleus	75.56	76.79
PGSC0003DMT400028286	Potato	cytosol	74.12	75.82
Os03t0713100-01	Rice	plasma membrane	73.96	75.78
Os01t0681100-01	Rice	cytosol, plasma membrane	22.2	75.54
Solyc10g062160.1.1	Tomato	plastid	70.45	75.38
AT3G60190.1	Thale cress	cytosol	74.28	74.52
Bra014507.1-P	Field mustard	cytosol	73.8	73.8
CDX89053	Canola	cytosol	73.8	73.8
CDY41188	Canola	cytosol	73.48	73.6
CDY42672	Canola	cytosol	73.32	73.44
Bra007513.1-P	Field mustard	cytosol	73.32	73.44
CDX71832	Canola	cytosol	73.32	73.44
CDY30477	Canola	cytosol	69.49	70.39
CDY23444	Canola	cytosol	69.49	70.39
AT2G44590.3	Thale cress	cytosol	68.69	70.26
Bra037643.1-P	Field mustard	cytosol	69.17	70.06
PGSC0003DMT400004228	Potato	cytosol	31.15	68.9
Os05t0556100-01	Rice	plasma membrane	65.81	67.65
Os01t0920400-01	Rice	nucleus, plastid	33.55	25.67
Os04t0381000-01	Rice	cytosol	32.27	24.88
Os03t0260000-01	Rice	cytosol	24.92	23.01
Os04t0129900-01	Rice	cytosol	24.12	22.08
Os08t0425100-01	Rice	plasma membrane	24.12	19.71
Os02t0738900-01	Rice	plasma membrane	28.91	19.61
Os06t0247800-01	Rice	plasma membrane	28.43	19.54
Os12t0178700-01	Rice	cytosol	15.65	17.53
Os01t0748000-00	Rice	plastid	20.77	15.82

Protein Annotations

Gene3D:1.20.120.1240	MapMan:22.1.7.1	Gene3D:3.40.50.300	EntrezGene:4347929	ProteinID:BAD46624.1	ProteinID:BAD54681.1
ProteinID:BAF25916.1	ProteinID:BAT09547.1	InterPro:Dynamin_GTPase	InterPro:Dynamin_GTPase_CS	InterPro:Dynamin_SF	InterPro:Dynamin_central
InterPro:GED	InterPro:GED_dom	GO:GO:0000166	GO:GO:0000266	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005515	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043
GO:GO:0016787	InterPro:G_DYNAMIN_dom	InterPro:IPR020850	InterPro:IPR030381	EnsemblPlantsGene:Os09g0572900	EnsemblPlants:Os09t0572900-01
InterPro:P-loop_NTPase	PFAM:PF00350	PFAM:PF01031	PFAM:PF02212	PRINTS:PR00195	ScanProsite:PS00410
PFscan:PS51388	PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF73	UniProt:Q650Z3	SMART:SM00053
SMART:SM00302	SUPFAM:SSF52540	UniParc:UPI000043A5D7	RefSeq:XP_015611627.1	RefSeq:XP_015611628.1	SEG:seg

Description

DONGJIN-LESION MIMICDynamin-related protein 1E, Negative regulation of programmed cell death, Control of cytochrome c release (Os09t0572900-01)

Coordinates

chr9:-:22911567..22916732

Molecular Weight (calculated)

69506.1 Da

IEP (calculated)

7.026

GRAVY (calculated)

-0.308

Length

626 amino acids

Sequence
(BLAST)

001: MASMEGLIGL MNRIQRACTA LGDHGGGEGA NLPTLWESLP TIAVVGGQSS GKSSVLESIV GRDFLPRGSG IVTRRPLVLQ LHQIDKGAHD YAEFLHLPKT
101: RFSDFALVRQ EIADETDRVT GKTKQISPVP IHLSIYSPNV VNLTLIDLPG LTKVAVEGQP ESVVHDIENM VRSYVEKPNC IILAISPANQ DIATSDAIKL
201: SKEVDPSGER TFGVLTKLDL MDKGTNALDV LEGRAYRLQY PWVGIVNRSQ ADINRKVDMI VAREKEREYF ENSPDYAHLA SKMGSVYLAK LLSQHLEAVI
301: KARIPSITSL INKTIDELES ELDTIGKEVA ADPGAQLYTI LELCRAFDRV FKEHLDGGRS GGDKIYGVFD HKLPAAFRKL PFDRYLSVQN VKKVVSEADG
401: YQPHLIAPEQ GYRRLVEAGL AYFKGPAEAT VDAVHVVLRD LVRKSIGETE PLRRFPTLQA AIATAANEAL ERFREDGRST ALRLVDMEAY LTVEFFRKLP
501: QDPDSGSKVG NNTNESNGSG SGSVTVDRYG DGHYRNIASN VSQYIKMVGD QLLHKIPKAV VHCQVREAKR SLLNHFYVHI GKKEASQFGH LLDEDPAMLE
601: RRQQCWKRLE LYKSARDEID SVAWTR

Best Arabidopsis Sequence Match ( AT3G60190.1 )
(BLAST)

001: MTTMESLIGL VNRIQRACTV LGDYGGGTGS NAFNSLWEAL PTVAVVGGQS SGKSSVLESI VGRDFLPRGS GIVTRRPLVL QLHKTDDGTE EYAEFLHLPK
101: KQFTDFALVR REIQDETDRI TGKNKQISPV PIHLSIYSPN VVNLTLIDLP GLTKVAVEGQ PETIAEDIES MVRTYVDKPN CIILAISPAN QDIATSDAIK
201: LAKDVDPTGE RTFGVLTKLD LMDKGTNALE VLEGRSYRLQ HPWVGIVNRS QADINKNVDM MLARRKEREY FDTSPDYGHL ASKMGSEYLA KLLSKHLESV
301: IRTRIPSILS LINKSIEELE RELDRMGRPV AVDAGAQLYT ILEMCRAFDK IFKEHLDGGR PGGDRIYGVF DNQLPAALKK LPFDRHLSLQ SVKKIVSEAD
401: GYQPHLIAPE QGYRRLIEGA LGYFRGPAEA SVDAVHYVLK ELVRKSISET EELKRFPSLQ VELAAAANSS LEKFREESKK SVIRLVDMES AYLTAEFFRK
501: LPQEIERPVT NSKNQTASPS SATLDQYGDG HFRRIASNVS AYVNMVSDTL RNTIPKACVY CQVRQAKLAL LNYFYSQISK REGKQLGQLL DEDPALMDRR
601: LECAKRLELY KKARDEIDAV AWVR

Arabidopsis Description

DRP1EDynamin-related protein 1E [Source:UniProtKB/Swiss-Prot;Acc:Q9FNX5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.